Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G46210
Type: Protein GRN ID: np26160 Name:
Annotation: Ribosomal protein S5 domain 2-like superfamily protein
Gene Locus: AT3G46210
Gene Expression (Affy ATH1 probeset): 252508_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4
3 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750
4 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL
5 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605
6 AT3G46210  --  has similar expression pattern (mutual information value=0.829888) with  --  ATRH25; STRS2
7 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.856042) with  --  AT2G45520
8 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.926168) with  --  AT2G34260
9 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.89734) with  --  TIM13
10 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.895964) with  --  AT4G02220
11 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.824916) with  --  AT4G30840
12 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.83324) with  --  AT3G43510
13 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.853265) with  --  AT3G49320
14 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT3G53342
15 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT3G53630
16 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT4G18692
17 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT1G55710
18 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.858743) with  --  AT3G59820
19 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.878229) with  --  AT5G22840
20 AT3G46210  --  has similar expression pattern (mutual information value=0.803766) with  --  OSB4  --  has similar expression pattern (mutual information value=0.84292) with  --  AT4G37090
21 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  interacts with  --  RRP41
22 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  interacts with  --  ATRRP4; RRP4
23 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.90592) with  --  ROL5
24 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT1G63250
25 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT2G07750
26 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.816742) with  --  EMB2217
27 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.907602) with  --  AT1G06560
28 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.937251) with  --  AT1G15480
29 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.998071) with  --  AtELP2; ELP2
30 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.971293) with  --  MEE67
31 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.971293) with  --  AT1G18320
32 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.964484) with  --  AT1G14300
33 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.904594) with  --  AT1G18850
34 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.893545) with  --  AT1G04945
35 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.09509) with  --  NRPA2
36 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.05335) with  --  AAC42; ATRPAC42
37 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.878917) with  --  AT1G13810
38 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.03919) with  --  AT1G06380
39 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.08572) with  --  RPL3P
40 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.965848) with  --  AtTRM11; TRM11
41 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.987182) with  --  AT4G04940
42 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.00187) with  --  AT3G57000
43 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.835489) with  --  ARP7; ARP7; ATARP7
44 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.968997) with  --  AT5G09840
45 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.893443) with  --  AT5G39840
46 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.813994) with  --  GFA2
47 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.812546) with  --  AT5G52820
48 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.89114) with  --  AT5G62290
49 AT3G46210  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808125) with  --  AtmtOM64; ATTOC64-V; MTOM64; OM64; TOC64-V
50 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.852477) with  --  EMB2785
51 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=1.03236) with  --  AT1G51380
52 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.856792) with  --  AT3G01800
53 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.834819) with  --  AT3G21540
54 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.905489) with  --  AT3G19440
55 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.902595) with  --  APUM24; PUM24
56 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.804205) with  --  MTSSB
57 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.949407) with  --  AR192
58 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=1.06025) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
59 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.871568) with  --  NRPA1
60 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=1.09354) with  --  AT5G02050
61 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=1.11565) with  --  AT5G11240
62 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.930636) with  --  AT5G14600
63 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.932782) with  --  RID2
64 AT3G46210  --  has similar expression pattern (mutual information value=0.874494) with  --  RBL  --  has similar expression pattern (mutual information value=0.942751) with  --  AT4G36580
65 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  interacts with  --  AT5G47590
66 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.933687) with  --  AT2G35605
67 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.922185) with  --  AT2G18330
68 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.86426) with  --  AT1G04590
69 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.13695) with  --  AT1G70350
70 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.956999) with  --  AT1G15250
71 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.901536) with  --  AT1G17510
72 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.991694) with  --  PPR596
73 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.980201) with  --  AT1G52930
74 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.94045) with  --  AT1G36310
75 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.948669) with  --  AT3G03920
76 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.05452) with  --  AT3G05810
77 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.984501) with  --  AT3G09890
78 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.99979) with  --  AT3G02650
79 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.03742) with  --  AT3G13940
80 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G25940
81 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.07989) with  --  ATPHB4; PHB4
82 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.85155) with  --  AT4G11120
83 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.960051) with  --  AT4G28450
84 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.826391) with  --  AT5G01230
85 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.880692) with  --  TIM8
86 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.977842) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
87 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.94797) with  --  AT5G27395
88 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.01086) with  --  AT5G16060
89 AT3G46210  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.958907) with  --  AT2G39795
90 AT3G46210  --  has similar expression pattern (mutual information value=0.829888) with  --  ATRH25; STRS2  --  has similar expression pattern (mutual information value=0.80945) with  --  AT2G19740
91 AT3G46210  --  has similar expression pattern (mutual information value=0.829888) with  --  ATRH25; STRS2  --  is the target gene of  --  ath-miR157d
92 AT3G46210  --  has similar expression pattern (mutual information value=0.829888) with  --  ATRH25; STRS2  --  is the target gene of  --  ath-miR157c
93 AT3G46210  --  has similar expression pattern (mutual information value=0.829888) with  --  ATRH25; STRS2  --  is the target gene of  --  ath-miR157b
94 AT3G46210  --  has similar expression pattern (mutual information value=0.829888) with  --  ATRH25; STRS2  --  is the target gene of  --  ath-miR157a
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact