Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G52820
Type: Protein GRN ID: np36970 Name:
Annotation: WD-40 repeat family protein / notchless protein, putative
Gene Locus: AT5G52820
Transcription factor /
transcriptional regulator:		 transcription factor family WD40-like
Gene Expression (Affy ATH1 probeset): 248326_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750
3 AT5G52820  --  has similar expression pattern (mutual information value=0.83254) with  --  AtTRM11; TRM11
4 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  interacts with  --  RRP41
5 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  interacts with  --  ATRRP4; RRP4
6 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.90592) with  --  ROL5
7 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT1G63250
8 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT2G07750
9 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.837313) with  --  OSB4
10 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.816742) with  --  EMB2217
11 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.907602) with  --  AT1G06560
12 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.937251) with  --  AT1G15480
13 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.998071) with  --  AtELP2; ELP2
14 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.971293) with  --  MEE67
15 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.971293) with  --  AT1G18320
16 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.964484) with  --  AT1G14300
17 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.904594) with  --  AT1G18850
18 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.893545) with  --  AT1G04945
19 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.09509) with  --  NRPA2
20 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.05335) with  --  AAC42; ATRPAC42
21 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.878917) with  --  AT1G13810
22 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.08572) with  --  RPL3P
23 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.987182) with  --  AT4G04940
24 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G46210
25 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53342
26 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53630
27 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT4G18692
28 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT1G55710
29 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.903231) with  --  RBL
30 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.07538) with  --  AT3G55605
31 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.00187) with  --  AT3G57000
32 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.835489) with  --  ARP7; ARP7; ATARP7
33 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.968997) with  --  AT5G09840
34 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.930196) with  --  AT5G22840
35 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.893443) with  --  AT5G39840
36 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.813994) with  --  GFA2
37 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.89114) with  --  AT5G62290
38 AT5G52820  --  has similar expression pattern (mutual information value=0.812546) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808125) with  --  AtmtOM64; ATTOC64-V; MTOM64; OM64; TOC64-V
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact