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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G59820
Type: Protein GRN ID: np29958 Name:
Annotation: LETM1-like protein [TCDB:2.A.1.1] [TCDB:2.A.1.3] [TCDB:9.B.70.1] [TCDB:9.B.71.1]
Gene Locus: AT3G59820
Gene Expression (Affy ATH1 probeset): 251432_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260
3 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4
4 AT3G59820  --  has similar expression pattern (mutual information value=0.855835) with  --  HCC1
5 AT3G59820  --  has similar expression pattern (mutual information value=0.856991) with  --  AT4G30840
6 AT3G59820  --  has similar expression pattern (mutual information value=0.859838) with  --  AT3G43510
7 AT3G59820  --  has similar expression pattern (mutual information value=0.891361) with  --  AT3G49320
8 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240
9 AT3G59820  --  has similar expression pattern (mutual information value=0.89055) with  --  EMB3007
10 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3
11 AT3G59820  --  has similar expression pattern (mutual information value=0.999831) with  --  LON1; LON_ARA_ARA
12 AT3G59820  --  transport  --  Galactose
13 AT3G59820  --  transport  --  Xylose
14 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  interacts with  --  DDB1A
15 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.966276) with  --  AT2G44510
16 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.863506) with  --  AT1G63250
17 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.863506) with  --  AT2G07750
18 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.03398) with  --  AT2G25355
19 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.11404) with  --  AT1G30960
20 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.944193) with  --  AT1G08580
21 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.09735) with  --  MEE67
22 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.09735) with  --  AT1G18320
23 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.11735) with  --  AAC42; ATRPAC42
24 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.831971) with  --  AT3G01800
25 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.20732) with  --  AT3G10530
26 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.993596) with  --  AT3G03060
27 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.09419) with  --  AT4G04940
28 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.927991) with  --  AT4G23620
29 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.14414) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
30 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.860518) with  --  AT4G31790
31 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.06798) with  --  RBL
32 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.945537) with  --  AT5G14600
33 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=1.07012) with  --  AT5G38720
34 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.848117) with  --  AT5G48240
35 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.98995) with  --  AT5G27395
36 AT3G59820  --  has similar expression pattern (mutual information value=0.997689) with  --  AT2G34260  --  has similar expression pattern (mutual information value=0.851664) with  --  AT4G36580
37 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.856042) with  --  AT2G45520
38 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.89734) with  --  TIM13
39 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.837313) with  --  AT3G07750
40 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.895964) with  --  AT4G02220
41 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.803766) with  --  AT3G46210
42 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT3G53342
43 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT3G53630
44 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT4G18692
45 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.831703) with  --  AT1G55710
46 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.878229) with  --  AT5G22840
47 AT3G59820  --  has similar expression pattern (mutual information value=0.858743) with  --  OSB4  --  has similar expression pattern (mutual information value=0.84292) with  --  AT4G37090
48 AT3G59820  --  has similar expression pattern (mutual information value=0.855835) with  --  HCC1  --  has similar expression pattern (mutual information value=0.874947) with  --  AT4G31810
49 AT3G59820  --  has similar expression pattern (mutual information value=0.855835) with  --  HCC1  --  has similar expression pattern (mutual information value=0.898863) with  --  AT5G55200
50 AT3G59820  --  has similar expression pattern (mutual information value=0.856991) with  --  AT4G30840  --  has similar expression pattern (mutual information value=0.93887) with  --  AT4G10620
51 AT3G59820  --  has similar expression pattern (mutual information value=0.856991) with  --  AT4G30840  --  is the target gene of  --  ath-miR832-3p
52 AT3G59820  --  has similar expression pattern (mutual information value=0.891361) with  --  AT3G49320  --  has similar expression pattern (mutual information value=0.813496) with  --  AT4G04790
53 AT3G59820  --  has similar expression pattern (mutual information value=0.891361) with  --  AT3G49320  --  has similar expression pattern (mutual information value=0.830019) with  --  RID2
54 AT3G59820  --  has similar expression pattern (mutual information value=0.891361) with  --  AT3G49320  --  has similar expression pattern (mutual information value=0.806178) with  --  AtmtOM64; ATTOC64-V; MTOM64; OM64; TOC64-V
55 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=0.977399) with  --  AT1G02370
56 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=0.853155) with  --  AT1G69070
57 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=1.01447) with  --  AT3G09720
58 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=0.810649) with  --  ATPRMT4B; PRMT4B
59 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=1.04279) with  --  ATPHB4; PHB4
60 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=1.04953) with  --  AT3G57000
61 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=0.94799) with  --  NRPA1
62 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=1.00593) with  --  AT5G02050
63 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=0.874564) with  --  AT5G09840
64 AT3G59820  --  has similar expression pattern (mutual information value=0.900131) with  --  AT5G11240  --  has similar expression pattern (mutual information value=0.848601) with  --  AT4G36680
65 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=0.985971) with  --  AT2G20710
66 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.1141) with  --  AT1G23100
67 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.10546) with  --  AT1G79470
68 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=0.840034) with  --  AT1G64600
69 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.15884) with  --  ATPRMT10; PRMT10
70 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=0.962376) with  --  ATKRS-1
71 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.18762) with  --  AT3G22660
72 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.00989) with  --  AT1G71850
73 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=0.808433) with  --  AT1G48830
74 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.03754) with  --  emb2474; TIM9
75 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.04202) with  --  emb1796
76 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=0.959254) with  --  AT5G47210
77 AT3G59820  --  has similar expression pattern (mutual information value=0.928621) with  --  GR-RBP3  --  has similar expression pattern (mutual information value=1.07227) with  --  AT5G19300
78 AT3G59820  --  has similar expression pattern (mutual information value=0.999831) with  --  LON1; LON_ARA_ARA  --  has similar expression pattern (mutual information value=0.976641) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
79 AT3G59820  --  has similar expression pattern (mutual information value=0.999831) with  --  LON1; LON_ARA_ARA  --  has similar expression pattern (mutual information value=0.848157) with  --  EMB2788
80 AT3G59820  --  has similar expression pattern (mutual information value=0.999831) with  --  LON1; LON_ARA_ARA  --  has similar expression pattern (mutual information value=0.822501) with  --  NRPC2
81 AT3G59820  --  transport  --  Galactose  --  is transported by  --  AtSAC9; SAC9
82 AT3G59820  --  transport  --  Galactose  --  is transported by  --  AT3G58760
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