Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G06560
Type: Protein GRN ID: np16998 Name:
Annotation: NOL1/NOP2/sun family protein
Gene Locus: AT1G06560
Gene Expression (Affy ATH1 probeset): 262618_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4
3 AT1G06560  --  has similar expression pattern (mutual information value=0.837724) with  --  AtELP2; ELP2
4 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750
5 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  interacts with  --  RRP41
6 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.84882) with  --  ROL5
7 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.864982) with  --  AT2G47790
8 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=1.06599) with  --  MEE67
9 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=1.06599) with  --  AT1G18320
10 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=1.06745) with  --  AAC42; ATRPAC42
11 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.992391) with  --  AT1G06380
12 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.989317) with  --  AT3G05810
13 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=1.00178) with  --  ATPRMT3; PRMT3
14 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.871877) with  --  AT1G20300
15 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.863044) with  --  AT4G02820
16 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.986365) with  --  AT4G04940
17 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.81071) with  --  EMB1706; MTA
18 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.83312) with  --  AT4G22350
19 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.83312) with  --  AT4G22285
20 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.980911) with  --  AT3G55605
21 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=1.05952) with  --  AT3G57000
22 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.826853) with  --  ATRANGAP1; RANGAP1
23 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=1.01049) with  --  AT5G17930
24 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.836837) with  --  AT5G39840
25 AT1G06560  --  has similar expression pattern (mutual information value=0.842503) with  --  ATRRP4; RRP4  --  has similar expression pattern (mutual information value=0.876729) with  --  TOZ
26 AT1G06560  --  has similar expression pattern (mutual information value=0.837724) with  --  AtELP2; ELP2  --  has similar expression pattern (mutual information value=0.809615) with  --  AT1G02370
27 AT1G06560  --  has similar expression pattern (mutual information value=0.837724) with  --  AtELP2; ELP2  --  has similar expression pattern (mutual information value=0.858902) with  --  AtLa1; La1
28 AT1G06560  --  has similar expression pattern (mutual information value=0.837724) with  --  AtELP2; ELP2  --  has similar expression pattern (mutual information value=0.81952) with  --  NRPA1
29 AT1G06560  --  has similar expression pattern (mutual information value=0.837724) with  --  AtELP2; ELP2  --  has similar expression pattern (mutual information value=0.981026) with  --  AT5G22840
30 AT1G06560  --  has similar expression pattern (mutual information value=0.837724) with  --  AtELP2; ELP2  --  transport  --  Cl-
31 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT1G63250
32 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT2G07750
33 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.837313) with  --  OSB4
34 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.816742) with  --  EMB2217
35 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.937251) with  --  AT1G15480
36 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.964484) with  --  AT1G14300
37 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.904594) with  --  AT1G18850
38 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.893545) with  --  AT1G04945
39 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.09509) with  --  NRPA2
40 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.878917) with  --  AT1G13810
41 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.08572) with  --  RPL3P
42 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.965848) with  --  AtTRM11; TRM11
43 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G46210
44 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53342
45 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53630
46 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT4G18692
47 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT1G55710
48 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.903231) with  --  RBL
49 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.835489) with  --  ARP7; ARP7; ATARP7
50 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.968997) with  --  AT5G09840
51 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.813994) with  --  GFA2
52 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.812546) with  --  AT5G52820
53 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.89114) with  --  AT5G62290
54 AT1G06560  --  has similar expression pattern (mutual information value=0.907602) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808125) with  --  AtmtOM64; ATTOC64-V; MTOM64; OM64; TOC64-V
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact