Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G15480
Type: Protein GRN ID: np15804 Name:
Annotation: Tetratricopeptide repeat (TPR)-like superfamily protein
Gene Locus: AT1G15480
Gene Expression (Affy ATH1 probeset): 262586_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G15480  --  has similar expression pattern (mutual information value=0.852144) with  --  AT2G02880
3 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750
4 AT1G15480  --  has similar expression pattern (mutual information value=0.848874) with  --  ARP7; ARP7; ATARP7
5 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840
6 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2
7 AT1G15480  --  has similar expression pattern (mutual information value=0.852144) with  --  AT2G02880  --  has similar expression pattern (mutual information value=0.941904) with  --  AT2G45520
8 AT1G15480  --  has similar expression pattern (mutual information value=0.852144) with  --  AT2G02880  --  has similar expression pattern (mutual information value=0.818974) with  --  AT1G12830
9 AT1G15480  --  has similar expression pattern (mutual information value=0.852144) with  --  AT2G02880  --  has similar expression pattern (mutual information value=0.822039) with  --  AT5G22320
10 AT1G15480  --  has similar expression pattern (mutual information value=0.852144) with  --  AT2G02880  --  has similar expression pattern (mutual information value=0.814792) with  --  AT1G56690
11 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  interacts with  --  RRP41
12 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  interacts with  --  ATRRP4; RRP4
13 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.90592) with  --  ROL5
14 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT1G63250
15 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.940058) with  --  AT2G07750
16 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.837313) with  --  OSB4
17 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.816742) with  --  EMB2217
18 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.907602) with  --  AT1G06560
19 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.998071) with  --  AtELP2; ELP2
20 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.971293) with  --  MEE67
21 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.971293) with  --  AT1G18320
22 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.964484) with  --  AT1G14300
23 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.904594) with  --  AT1G18850
24 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.893545) with  --  AT1G04945
25 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.09509) with  --  NRPA2
26 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.05335) with  --  AAC42; ATRPAC42
27 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.878917) with  --  AT1G13810
28 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.03919) with  --  AT1G06380
29 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.08572) with  --  RPL3P
30 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.965848) with  --  AtTRM11; TRM11
31 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.987182) with  --  AT4G04940
32 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G46210
33 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53342
34 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53630
35 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT4G18692
36 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT1G55710
37 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.903231) with  --  RBL
38 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.07538) with  --  AT3G55605
39 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.00187) with  --  AT3G57000
40 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.968997) with  --  AT5G09840
41 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.893443) with  --  AT5G39840
42 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.813994) with  --  GFA2
43 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.812546) with  --  AT5G52820
44 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.89114) with  --  AT5G62290
45 AT1G15480  --  has similar expression pattern (mutual information value=0.937251) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808125) with  --  AtmtOM64; ATTOC64-V; MTOM64; OM64; TOC64-V
46 AT1G15480  --  has similar expression pattern (mutual information value=0.848874) with  --  ARP7; ARP7; ATARP7  --  is the target gene of  --  ath-miR5640
47 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.839141) with  --  AT1G03760
48 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=1.17191) with  --  TIM13
49 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.883925) with  --  ATRPAC43; RPAC43
50 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.901329) with  --  AT1G09300
51 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.820771) with  --  AT1G48560
52 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.80884) with  --  AT1G71060
53 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.80258) with  --  AT1G69070
54 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.852466) with  --  AT4G01790
55 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.863923) with  --  AT4G02220
56 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.811692) with  --  EMB1706; MTA
57 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.801516) with  --  AT4G10620
58 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.823555) with  --  AT3G48210
59 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.8414) with  --  AT3G49725
60 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.80261) with  --  NRPA1
61 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.903418) with  --  AT3G63400
62 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.832736) with  --  HD2C; HDT3
63 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=1.12772) with  --  ABO1; AtELP1; ELO2
64 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.845246) with  --  AT5G25080
65 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=1.04689) with  --  AT4G37090
66 AT1G15480  --  has similar expression pattern (mutual information value=1.02216) with  --  AT5G22840  --  has similar expression pattern (mutual information value=0.817114) with  --  MAP1A
67 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=0.817909) with  --  ATMAP70-3; MAP70-3
68 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=0.984994) with  --  AT1G67120
69 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=0.876901) with  --  AT1G69380
70 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=0.833288) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
71 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=0.854312) with  --  AT5G17270
72 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=1.00644) with  --  EMB3012
73 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=0.822501) with  --  LON1; LON_ARA_ARA
74 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has similar expression pattern (mutual information value=0.90971) with  --  AT5G15610
75 AT1G15480  --  has similar expression pattern (mutual information value=0.926228) with  --  NRPC2  --  has product (in catalytic reaction)  --  RNA
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact