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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G29850
Type: Protein GRN ID: np18164 Name:
Annotation: double-stranded DNA-binding family protein
Gene Locus: AT1G29850
Gene Expression (Affy ATH1 probeset): 256001_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G29850  --  interacts with  --  AT4G25660
3 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330
4 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800
5 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G58750
6 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G65925
7 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G31830
8 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G28690
9 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G47310
10 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  emb2735
11 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G27610
12 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B5
13 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G04740
14 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ATRAB1A; ATRABD2B; RAB1A
15 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G51180
16 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G57300
17 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G24990
18 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G09450
19 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AtTic22-IV; Tic22-IV
20 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G12010
21 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G25680
22 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G16250
23 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B6
24 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ATRAB-F2A; ATRAB5A; ATRABF2A; RAB-F2A; RAB5A; RABF2A; RHA1
25 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G71480
26 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B2
27 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G14340
28 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ARA-3; ARA3; ATRAB8A; ATRABE1C; RAB8A; RABE1c
29 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G44970
30 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G34460
31 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G40765
32 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G59710
33 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G55160
34 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ASAR1; ATSAR2; ATSARA1C; SAR2
35 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G07840
36 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ATSAR1; ATSARA1A; SARA1A
37 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  NodGS
38 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G20150
39 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G67860
40 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ATNFU2; NFU4
41 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G67865
42 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  GLX2-4
43 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.F2; PRA7
44 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G08480
45 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G30880
46 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT3G13845
47 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ATISU1; ISU1
48 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G49850
49 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  DEL1; E2FE; E2L3
50 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT3G20680
51 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
52 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  ATRAB8; AtRab8B; AtRABE1a; RAB8
53 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G17486
54 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  IMPA-2
55 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G78140
56 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.F3; PRA8
57 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B4
58 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.F4
59 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  APFI; GAMMA CA2
60 AT1G29850  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G17720
61 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.979961) with  --  AT2G44200
62 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.854588) with  --  AT2G19270
63 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=1.16199) with  --  ATCSN2; COP12; CSN2; FUS12
64 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.878278) with  --  AT2G27285
65 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=1.00372) with  --  AT2G24830
66 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.877674) with  --  AT1G65220
67 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.883541) with  --  ATDSS1(I); DSS1(I)
68 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.876061) with  --  AT1G17130
69 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.825019) with  --  AT1G11240
70 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.960685) with  --  DRT111
71 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=1.02537) with  --  AT1G74250
72 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.963083) with  --  CHR11
73 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.980592) with  --  EIF4B1
74 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.909596) with  --  AT4G12760
75 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.975092) with  --  AT4G18260
76 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.983571) with  --  AT4G39160
77 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=1.10725) with  --  AT1G01350
78 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=1.10725) with  --  AT5G06420
79 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.916212) with  --  AT5G14440
80 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.979294) with  --  AT5G49000
81 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.994627) with  --  AT5G51130
82 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.902259) with  --  NRPB6A; NRPD6A; NRPE6A
83 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.83758) with  --  CPL4
84 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=1.01236) with  --  HOS15
85 AT1G29850  --  has similar expression pattern (mutual information value=0.813484) with  --  AT1G02330  --  has similar expression pattern (mutual information value=0.816337) with  --  AT4G17010
86 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.871175) with  --  AT2G38420
87 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.10841) with  --  ATIPT2
88 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.907811) with  --  AT2G40650
89 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.856044) with  --  ATMAP70-3; MAP70-3
90 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.910478) with  --  AT1G55460
91 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.11856) with  --  AT1G60900
92 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.11856) with  --  AT1G60830
93 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.817885) with  --  AT1G06530
94 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.07517) with  --  AT1G32630
95 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.969971) with  --  NF-YC10
96 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.959904) with  --  ATPC2
97 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.989416) with  --  HAT3.1
98 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.24632) with  --  AT3G19650
99 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.991438) with  --  AT3G19630
100 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.980269) with  --  AT2G34040
101 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.884068) with  --  AT4G08460
102 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.841087) with  --  AT4G17960
103 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.17411) with  --  AT4G22350
104 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.17411) with  --  AT4G22285
105 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.05274) with  --  GAUT3
106 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.812928) with  --  AT3G44690
107 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.988789) with  --  AT3G48120
108 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.996728) with  --  AT3G51270
109 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.856852) with  --  DEI1; PAS1
110 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.904032) with  --  ATFIP37; FIP37
111 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.83821) with  --  AT5G14820
112 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.83821) with  --  AT3G62540
113 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.83821) with  --  AT3G62470
114 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.937573) with  --  AT5G18950
115 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.3173) with  --  ATGSTT2; GST10B; GSTT2
116 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.3173) with  --  ATGSTT3; GST10C; GSTT3
117 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.04224) with  --  ATCBP20
118 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.894417) with  --  AT5G50020
119 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.12649) with  --  AT1G48900
120 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.829234) with  --  AT5G16950
121 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.17202) with  --  AT1G31870
122 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=0.911305) with  --  SMP2
123 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.02797) with  --  AT5G19960
124 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.0673) with  --  FAR1
125 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  has similar expression pattern (mutual information value=1.07708) with  --  SMU2
126 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  interacts with  --  AT5G27860
127 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  interacts with  --  AT4G33690
128 AT1G29850  --  has similar expression pattern (mutual information value=0.802347) with  --  AT5G53800  --  interacts with  --  AT2G43370
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