Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G55160
Type: Protein GRN ID: np18109 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT1G55160
Gene Expression (Affy ATH1 probeset): 259665_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G55160  --  interacts with  --  AT4G25660
3 AT1G55160  --  interacts with  --  AT5G50370
4 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G58750
5 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G65925
6 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G31830
7 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G28690
8 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G47310
9 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  emb2735
10 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G27610
11 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B5
12 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G04740
13 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ATRAB1A; ATRABD2B; RAB1A
14 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G51180
15 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G57300
16 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G24990
17 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G09450
18 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AtTic22-IV; Tic22-IV
19 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G12010
20 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G25680
21 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT5G16250
22 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B6
23 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ATRAB-F2A; ATRAB5A; ATRABF2A; RAB-F2A; RAB5A; RABF2A; RHA1
24 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G71480
25 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B2
26 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G14340
27 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ARA-3; ARA3; ATRAB8A; ATRABE1C; RAB8A; RABE1c
28 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G44970
29 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G34460
30 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G40765
31 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G59710
32 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ASAR1; ATSAR2; ATSARA1C; SAR2
33 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G29850
34 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G07840
35 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ATSAR1; ATSARA1A; SARA1A
36 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  NodGS
37 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G20150
38 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G67860
39 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ATNFU2; NFU4
40 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G67865
41 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  GLX2-4
42 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.F2; PRA7
43 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G08480
44 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT2G30880
45 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT3G13845
46 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ATISU1; ISU1
47 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G49850
48 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  DEL1; E2FE; E2L3
49 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT3G20680
50 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
51 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  ATRAB8; AtRab8B; AtRABE1a; RAB8
52 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G17486
53 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  IMPA-2
54 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT1G78140
55 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.F3; PRA8
56 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.B4
57 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  PRA1.F4
58 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  APFI; GAMMA CA2
59 AT1G55160  --  interacts with  --  AT4G25660  --  interacts with  --  AT4G17720
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact