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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node At-SCL28; SCL28
Type: Protein GRN ID: np39696 Name: At-SCL28; SCL28
Annotation: SCL28, At-SCL28 | SC35-like splicing factor 28
Gene Locus: AT5G18810
Gene Expression (Affy ATH1 probeset): 249976_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33
3 At-SCL28; SCL28  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30
4 At-SCL28; SCL28  --  interacts with  --  At-SCL30A; SCL30A
5 At-SCL28; SCL28  --  interacts with  --  At-SCL30; SCL30
6 At-SCL28; SCL28  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34
7 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21
8 At-SCL28; SCL28  --  interacts with  --  AT2G43370
9 At-SCL28; SCL28  --  interacts with  --  AT3G63400
10 At-SCL28; SCL28  --  interacts with  --  AT4G32420
11 At-SCL28; SCL28  --  interacts with  --  At-SCL33; ATSCL33; SCL33; SR33
12 At-SCL28; SCL28  --  interacts with  --  ATCYP59; CYP59
13 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  interacts with  --  AME3
14 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  interacts with  --  At-RS31; ATRSP31; RS31; RSP31
15 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  interacts with  --  At-SC35; ATSC35; SC35
16 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22
17 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  interacts with  --  AT5G62600
18 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=1.08753) with  --  EMB2776; LIS
19 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=0.809438) with  --  AT1G30880
20 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=0.903536) with  --  AT1G06630
21 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=0.823769) with  --  ANAC014; NAC014
22 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=0.806288) with  --  BIM2
23 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=0.844311) with  --  AT4G32910
24 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=0.819572) with  --  AT4G38440
25 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  has similar expression pattern (mutual information value=0.955899) with  --  At-RS2Z; RS2Z32; RSZ32
26 At-SCL28; SCL28  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33  --  is the target gene of  --  ath-miR842
27 At-SCL28; SCL28  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  AtRZ-1b; RZ-1b
28 At-SCL28; SCL28  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  AT5G52530
29 At-SCL28; SCL28  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  At-RS41; ATRSP41; RS41
30 At-SCL28; SCL28  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  AT2G29210
31 At-SCL28; SCL28  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  AtRZ-1c; RZ-1c
32 At-SCL28; SCL28  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  has similar expression pattern (mutual information value=0.822944) with  --  AT1G68140
33 At-SCL28; SCL28  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  AT5G25490
34 At-SCL28; SCL28  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  ATU2AF35B; U2AF35B
35 At-SCL28; SCL28  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  AT1G71020
36 At-SCL28; SCL28  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  ATCBL2; CBL2
37 At-SCL28; SCL28  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  has similar expression pattern (mutual information value=0.858514) with  --  AT1G09280
38 At-SCL28; SCL28  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  has similar expression pattern (mutual information value=0.830535) with  --  ACBP2
39 At-SCL28; SCL28  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  has similar expression pattern (mutual information value=0.809528) with  --  AT4G29380
40 At-SCL28; SCL28  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  has similar expression pattern (mutual information value=0.937819) with  --  AT5G66180
41 At-SCL28; SCL28  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  is the target gene of  --  ath-miR864-5p
42 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=1.05626) with  --  emb1220
43 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=1.05626) with  --  AT3G60610
44 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.955931) with  --  GIF2
45 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.849329) with  --  AT1G05410
46 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.802575) with  --  SUE3; VIP1
47 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.824651) with  --  AT3G02280
48 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.821018) with  --  AT3G07220
49 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.821018) with  --  AT3G07260
50 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.882634) with  --  AT3G19630
51 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.888465) with  --  AT3G22220
52 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.941344) with  --  AT5G16505
53 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.921559) with  --  AT5G46840
54 At-SCL28; SCL28  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21  --  has similar expression pattern (mutual information value=0.894074) with  --  AT5G49880
55 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G53060
56 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  LSU2
57 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT4G39050
58 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  LSU1
59 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G19960
60 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G58720
61 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  BOI; RING
62 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT3G50910
63 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  SUA
64 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT3G11590
65 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G38600
66 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G53800
67 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  ATEXO70E2; EXO70E2
68 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  At-RS40; AT-SRP40; ATRSP35; ATRSP40; RS40; RSP35
69 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT1G30860
70 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  At-RSZ22a; RSZ22a
71 At-SCL28; SCL28  --  interacts with  --  AT2G43370  --  interacts with  --  AT1G09660
72 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.942977) with  --  AT2G47790
73 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.855433) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
74 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.911863) with  --  AT1G03760
75 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.805386) with  --  AT1G79950
76 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.952637) with  --  AT1G07615
77 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.864815) with  --  AT1G48560
78 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.879028) with  --  AT4G22350
79 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.879028) with  --  AT4G22285
80 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.845958) with  --  AT4G31880
81 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.853681) with  --  GAUT3
82 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.800048) with  --  EMB2789; MOS7
83 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.968377) with  --  ABO1; AtELP1; ELO2
84 At-SCL28; SCL28  --  interacts with  --  AT3G63400  --  has similar expression pattern (mutual information value=0.869998) with  --  AT5G15570
85 At-SCL28; SCL28  --  interacts with  --  AT4G32420  --  interacts with  --  ATCSP3; CSP3
86 At-SCL28; SCL28  --  interacts with  --  AT4G32420  --  has product (in catalytic reaction)  --  Peptidylproline (omega=0)
87 At-SCL28; SCL28  --  interacts with  --  ATCYP59; CYP59  --  has similar expression pattern (mutual information value=0.842803) with  --  AT2G40650
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