Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AtRZ-1c; RZ-1c
Type: Protein GRN ID: np37678 Name: AtRZ-1c; RZ-1c
Annotation: RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Gene Locus: AT5G04280
Transcription factor /
transcriptional regulator:		 transcription factor interactor and regulator family CCHC(Zn)
Gene Expression (Affy ATH1 probeset): 245714_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G25490
3 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060
4 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G06770
5 AtRZ-1c; RZ-1c  --  interacts with  --  AtRZ-1b; RZ-1b
6 AtRZ-1c; RZ-1c  --  interacts with  --  AT2G44710
7 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30
8 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30
9 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G25490  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1
10 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G25490  --  interacts with  --  PTF1; TCP13; TFPD
11 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G25490  --  interacts with  --  AT2G37220
12 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G25490  --  interacts with  --  AT4G24500
13 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G25490  --  interacts with  --  AT2G43370
14 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2
15 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060  --  interacts with  --  AT5G54580
16 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060  --  interacts with  --  AT1G29120
17 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060  --  interacts with  --  AT5G05190
18 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060  --  interacts with  --  AT5G11090
19 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060  --  interacts with  --  MOS1
20 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G53060  --  interacts with  --  AT2G39100
21 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G06770  --  interacts with  --  ATPABN1; PABN1
22 AtRZ-1c; RZ-1c  --  interacts with  --  AT5G06770  --  interacts with  --  DCP5
23 AtRZ-1c; RZ-1c  --  interacts with  --  AtRZ-1b; RZ-1b  --  interacts with  --  AT2G36145
24 AtRZ-1c; RZ-1c  --  interacts with  --  AtRZ-1b; RZ-1b  --  interacts with  --  IMPA-2
25 AtRZ-1c; RZ-1c  --  interacts with  --  AtRZ-1b; RZ-1b  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
26 AtRZ-1c; RZ-1c  --  interacts with  --  AT2G44710  --  interacts with  --  AT5G44090
27 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  AT5G52530
28 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  At-RS41; ATRSP41; RS41
29 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  AT2G29210
30 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  At-SCL30A; SCL30A
31 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  At-SCL28; SCL28
32 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  interacts with  --  ATCYP59; CYP59
33 AtRZ-1c; RZ-1c  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30  --  has similar expression pattern (mutual information value=0.822944) with  --  AT1G68140
34 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  ATU2AF35B; U2AF35B
35 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  AME3
36 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33
37 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34
38 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21
39 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  AT1G71020
40 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  At-RSZ22; RSZ22; RSZP22; SRZ-22; SRZ22
41 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  AT3G63400
42 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  AT4G32420
43 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  At-SC35; ATSC35; SC35
44 AtRZ-1c; RZ-1c  --  interacts with  --  At-SCL30; SCL30  --  interacts with  --  At-SCL33; ATSCL33; SCL33; SR33
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact