Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G09990
Type: Protein GRN ID: np22742 Name:
Annotation: Ribosomal protein S5 domain 2-like superfamily protein
Gene Locus: AT2G09990
Gene Expression (Affy ATH1 probeset): 263821_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10
3 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100
4 AT2G09990  --  has similar expression pattern (mutual information value=1.02687) with  --  emb2171
5 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  RPL16B
6 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  AT5G45775
7 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760
8 AT2G09990  --  has similar expression pattern (mutual information value=0.994112) with  --  AT5G27700
9 AT2G09990  --  has similar expression pattern (mutual information value=0.996169) with  --  AT4G36420
10 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.86709) with  --  RPS14
11 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.22526) with  --  AT2G36160
12 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.42596) with  --  AT1G02870
13 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.10863) with  --  AT1G26740
14 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.829625) with  --  AT3G02220
15 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.13843) with  --  AT3G01790
16 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.821233) with  --  RPS18C
17 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.08231) with  --  AT5G06360
18 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.829805) with  --  AT5G23900
19 AT2G09990  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.03851) with  --  AT5G47930
20 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  interacts with  --  AT2G40010
21 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  interacts with  --  AT3G44590
22 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.194) with  --  AT1G26880
23 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  has similar expression pattern (mutual information value=0.82453) with  --  AT2G40510
24 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  has similar expression pattern (mutual information value=0.82453) with  --  AT2G40590
25 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.11661) with  --  AT2G05220
26 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.11661) with  --  AT5G04800
27 AT2G09990  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.11661) with  --  AT2G04390
28 AT2G09990  --  has similar expression pattern (mutual information value=1.02687) with  --  emb2171  --  has similar expression pattern (mutual information value=0.871794) with  --  AT2G44120
29 AT2G09990  --  has similar expression pattern (mutual information value=1.02687) with  --  emb2171  --  has similar expression pattern (mutual information value=1.18508) with  --  RPL27A; RPL27AB
30 AT2G09990  --  has similar expression pattern (mutual information value=1.02687) with  --  emb2171  --  has similar expression pattern (mutual information value=0.926733) with  --  AP40; P40; RP40; RPSAA
31 AT2G09990  --  has similar expression pattern (mutual information value=1.02687) with  --  emb2171  --  has similar expression pattern (mutual information value=1.05791) with  --  AT4G12600
32 AT2G09990  --  has similar expression pattern (mutual information value=1.02687) with  --  emb2171  --  has similar expression pattern (mutual information value=0.937246) with  --  AT3G51010
33 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  RPL16B  --  has similar expression pattern (mutual information value=1.06983) with  --  AT1G33120
34 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.951185) with  --  AT3G28900
35 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  RPL16B  --  has similar expression pattern (mutual information value=1.08623) with  --  AT3G22230
36 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07930
37 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07920
38 AT2G09990  --  has similar expression pattern (mutual information value=1.1082) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07940
39 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450
40 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760  --  has similar expression pattern (mutual information value=0.909787) with  --  ATGRP2; GR-RBP2; GRP2
41 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760  --  has similar expression pattern (mutual information value=0.825373) with  --  AT4G28360
42 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760  --  has similar expression pattern (mutual information value=0.825373) with  --  AT1G52370
43 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760  --  has similar expression pattern (mutual information value=1.01326) with  --  AT3G45030
44 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760  --  has similar expression pattern (mutual information value=1.32868) with  --  ARS27A; RS27A
45 AT2G09990  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G48760  --  has similar expression pattern (mutual information value=0.83282) with  --  ECT3
46 AT2G09990  --  has similar expression pattern (mutual information value=0.994112) with  --  AT5G27700  --  has similar expression pattern (mutual information value=0.851838) with  --  AT3G43980
47 AT2G09990  --  has similar expression pattern (mutual information value=0.994112) with  --  AT5G27700  --  has similar expression pattern (mutual information value=0.851838) with  --  AT3G44010
48 AT2G09990  --  has similar expression pattern (mutual information value=0.996169) with  --  AT4G36420  --  has similar expression pattern (mutual information value=0.983398) with  --  AT2G11910
49 AT2G09990  --  has similar expression pattern (mutual information value=0.996169) with  --  AT4G36420  --  has similar expression pattern (mutual information value=0.874955) with  --  NRP1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact