Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node EMB1241
Type: Protein GRN ID: np42385 Name: EMB1241
Annotation: EMB1241 | Co-chaperone GrpE family protein
Gene Locus: AT5G17710
Gene Expression (Affy ATH1 probeset): 250061_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3
3 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3  --  has similar expression pattern (mutual information value=0.931459) with  --  AT2G44640
4 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3  --  has similar expression pattern (mutual information value=1.0121) with  --  CPZ; TRZ2
5 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3  --  has similar expression pattern (mutual information value=0.963434) with  --  EMB3108
6 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3  --  has similar expression pattern (mutual information value=0.850356) with  --  EMB1047; EMB156; EMB36; FTSH12
7 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3  --  has similar expression pattern (mutual information value=0.972094) with  --  CS26
8 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3  --  has similar expression pattern (mutual information value=0.836781) with  --  AT4G34290
9 EMB1241  --  has similar expression pattern (mutual information value=0.934441) with  --  RFC3  --  has similar expression pattern (mutual information value=0.974542) with  --  AT5G11480
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact