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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G19900
Type: Protein GRN ID: np29491 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3067 (InterPro:IPR021420); Has 276 Blast hits to 276 proteins in 83 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
Gene Locus: AT3G19900
Gene Expression (Affy ATH1 probeset): 257965_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1
3 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.871774) with  --  ATBBD1; BBD1
4 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.828231) with  --  ATMYBL2; MYBL2
5 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.878479) with  --  AT3G03960
6 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.85264) with  --  HSP60; HSP60-3B
7 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.941007) with  --  AT1G55000
8 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.97609) with  --  WCRKC1
9 AT3G19900  --  has similar expression pattern (mutual information value=0.86279) with  --  ATCXXS1; CXXS1  --  has similar expression pattern (mutual information value=0.89627) with  --  AT5G27330
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