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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G54910
Type: Protein GRN ID: np38969 Name:
Annotation: DEA(D/H)-box RNA helicase family protein [EC:3.6.4.13]
Gene Locus: AT5G54910
Gene Expression (Affy ATH1 probeset): 248136_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1
3 AT5G54910  --  has similar expression pattern (mutual information value=1.00738) with  --  AT2G18220
4 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280
5 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530
6 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B
7 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796
8 AT5G54910  --  has similar expression pattern (mutual information value=0.919392) with  --  OLI2
9 AT5G54910  --  has similar expression pattern (mutual information value=0.847067) with  --  AT5G66540
10 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  transport  --  Selenite
11 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=0.886127) with  --  AT2G32220
12 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=0.896217) with  --  AT2G17670
13 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=1.01672) with  --  AT1G79470
14 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=0.958824) with  --  AT1G53560
15 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=0.956198) with  --  AT3G05130
16 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=0.946737) with  --  ATRBP47B; RBP47B
17 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=1.29822) with  --  PNM1
18 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=0.909486) with  --  SDN3
19 AT5G54910  --  has similar expression pattern (mutual information value=0.942994) with  --  EDA13; EDA19; SWA1  --  has similar expression pattern (mutual information value=1.08179) with  --  AT5G19300
20 AT5G54910  --  has similar expression pattern (mutual information value=1.00738) with  --  AT2G18220  --  has similar expression pattern (mutual information value=0.870279) with  --  AT1G73180
21 AT5G54910  --  has similar expression pattern (mutual information value=1.00738) with  --  AT2G18220  --  has similar expression pattern (mutual information value=0.964464) with  --  AT1G77550
22 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.904351) with  --  PPR596
23 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.97378) with  --  AAC42; ATRPAC42
24 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.926419) with  --  AT3G16080
25 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280  --  has similar expression pattern (mutual information value=1.00665) with  --  AT3G15080
26 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.896044) with  --  AT4G02400
27 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.887193) with  --  AT3G57490
28 AT5G54910  --  has similar expression pattern (mutual information value=0.908811) with  --  AT1G23280  --  has similar expression pattern (mutual information value=0.923102) with  --  AT5G62440
29 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.20732) with  --  AT2G34260
30 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.991436) with  --  MEE21
31 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.987124) with  --  AT1G08580
32 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.808804) with  --  ATPHB6; PHB6
33 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.808804) with  --  ATPHB1; PHB1
34 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.926698) with  --  AT1G14060
35 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.04586) with  --  AT3G03060
36 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.00386) with  --  AT1G71850
37 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.00445) with  --  ATPHB4; PHB4
38 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.968252) with  --  AT4G23620
39 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.10126) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
40 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.02803) with  --  AT4G31810
41 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.855298) with  --  AT4G31790
42 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.892747) with  --  AT3G49320
43 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.03) with  --  AT5G02050
44 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.12223) with  --  AT5G06550
45 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.10099) with  --  AT5G11240
46 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.00082) with  --  AT5G14580
47 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.800385) with  --  AT5G48240
48 AT5G54910  --  has similar expression pattern (mutual information value=1.27442) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.98355) with  --  RID2
49 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
50 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.85264) with  --  ATCXXS1; CXXS1
51 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.801964) with  --  ATBBD1; BBD1
52 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=1.01164) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
53 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=1.01362) with  --  AT3G03960
54 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.826806) with  --  AT3G23940
55 AT5G54910  --  has similar expression pattern (mutual information value=0.888908) with  --  HSP60; HSP60-3B  --  has similar expression pattern (mutual information value=0.816373) with  --  ATEIF2-A2; EIF2 ALPHA; EIF2-A2
56 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796  --  has similar expression pattern (mutual information value=1.02186) with  --  AT2G20710
57 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796  --  has similar expression pattern (mutual information value=0.904698) with  --  AT3G19360
58 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796  --  has similar expression pattern (mutual information value=0.827157) with  --  EMB3120
59 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796  --  has similar expression pattern (mutual information value=0.84516) with  --  AT3G66652
60 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796  --  has similar expression pattern (mutual information value=0.960054) with  --  AT3G12340
61 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796  --  has similar expression pattern (mutual information value=1.04202) with  --  GR-RBP3
62 AT5G54910  --  has similar expression pattern (mutual information value=0.91284) with  --  emb1796  --  has similar expression pattern (mutual information value=0.811018) with  --  ACYB-2
63 AT5G54910  --  has similar expression pattern (mutual information value=0.847067) with  --  AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10
64 AT5G54910  --  has similar expression pattern (mutual information value=0.847067) with  --  AT5G66540  --  has similar expression pattern (mutual information value=0.833152) with  --  AT5G38720
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