Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G38610
Type: Protein GRN ID: np21332 Name:
Annotation: RNA-binding KH domain-containing protein
Gene Locus: AT2G38610
Gene Expression (Affy ATH1 probeset): 266420_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G38610  --  interacts with  --  AT3G21215
3 AT2G38610  --  interacts with  --  AT1G09660
4 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  ATGRP2; GR-RBP2; GRP2
5 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AT4G03120
6 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  BTR1; BTR1L; BTR1S
7 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AT4G01090
8 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AT5G54580
9 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AT5G46190
10 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AT3G22440
11 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AtDRM3; DRM3
12 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AT1G03457
13 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  At-RSZ22a; RSZ22a
14 AT2G38610  --  interacts with  --  AT3G21215  --  interacts with  --  AT2G33410
15 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT5G38420
16 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT2G39740
17 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  PTF1; TCP13; TFPD
18 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT5G51110
19 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  ATFKBP12; FKBP12
20 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT3G51180
21 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  RFI2
22 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  PSAD-1
23 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT2G39100
24 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT3G15160
25 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT1G49850
26 AT2G38610  --  interacts with  --  AT1G09660  --  interacts with  --  AT2G43370
27 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.803283) with  --  AT2G32730
28 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.978236) with  --  AT2G47790
29 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.913602) with  --  RIP3
30 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.853758) with  --  AT1G80790
31 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.858356) with  --  AT3G19650
32 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.844802) with  --  AT4G05400
33 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.89347) with  --  AT4G07950
34 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.89347) with  --  AT1G01210
35 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.971404) with  --  AT4G22350
36 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.971404) with  --  AT4G22285
37 AT2G38610  --  interacts with  --  AT1G09660  --  has similar expression pattern (mutual information value=0.970564) with  --  AT5G57120
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact