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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G56680
Type: Protein GRN ID: np29426 Name:
Annotation: Single-stranded nucleic acid binding R3H protein
Gene Locus: AT3G56680
Gene Expression (Affy ATH1 probeset): 246319_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G56680  --  interacts with  --  AT1G01440
3 AT3G56680  --  interacts with  --  AN
4 AT3G56680  --  interacts with  --  AT3G11590
5 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  KAN; KAN1
6 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT1G31050
7 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  ATY1; TRX-Y1; TY1
8 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  RFI2
9 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  LSU1
10 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  BRX
11 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT4G01090
12 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT5G38640
13 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT2G45360
14 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT4G21705
15 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT3G22440
16 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT5G38420
17 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT5G48385
18 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT3G51180
19 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  RAP2.7; TOE1
20 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT3G61790
21 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  CDKC;1
22 AT3G56680  --  interacts with  --  AT1G01440  --  interacts with  --  AT1G49850
23 AT3G56680  --  interacts with  --  AN  --  interacts with  --  ATCESA7; CESA7; IRX3; MUR10
24 AT3G56680  --  interacts with  --  AN  --  interacts with  --  TDP1
25 AT3G56680  --  interacts with  --  AN  --  interacts with  --  AT5G65683
26 AT3G56680  --  interacts with  --  AN  --  interacts with  --  SCM; SRF9; SUB
27 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT5G20030
28 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G50910
29 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G17740
30 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  ATMAP70-5; MAP70-5
31 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  LSU2
32 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT4G15730
33 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G27960
34 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  HDG4
35 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AME3
36 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT5G58950
37 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G30860
38 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  ASIL1
39 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  ATSK41; SK41
40 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G48280
41 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT2G19650
42 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G31870
43 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G12650
44 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G06980
45 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G01630
46 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G80000
47 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AtMYB70; MYB70
48 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  RCN1 ATB BETA BETA
49 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AtPPR2; EMB2750; PPR2
50 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT2G32650
51 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G01690
52 AT3G56680  --  interacts with  --  AT3G11590  --  interacts with  --  AT2G43370
53 AT3G56680  --  interacts with  --  AT3G11590  --  has similar expression pattern (mutual information value=0.870626) with  --  AT3G16060
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