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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G09880
Type: Protein GRN ID: np39740 Name:
Annotation: Splicing factor, CC1-like [TCDB:5.B.1.2]
Gene Locus: AT5G09880
Gene Expression (Affy ATH1 probeset): 250457_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5
3 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.905033) with  --  SE
4 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=1.14492) with  --  AT1G60200
5 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.95915) with  --  AT1G15940
6 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.915821) with  --  ATPC2
7 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.82528) with  --  LD
8 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.825156) with  --  AT4G10930
9 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.945569) with  --  AT5G28330
10 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.945569) with  --  AT5G28390
11 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.945569) with  --  AT3G52660
12 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.937875) with  --  SUA
13 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.995721) with  --  TGH
14 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.912339) with  --  ATXR7; SDG25
15 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.82536) with  --  AT5G44180
16 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.927461) with  --  At-RS41; ATRSP41; RS41
17 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.834796) with  --  ATRAD21.3; SYN4
18 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.989392) with  --  DOT2; MDF
19 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  has similar expression pattern (mutual information value=0.989724) with  --  AT5G17440
20 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  is the target gene of  --  ath-miR5998b
21 AT5G09880  --  has similar expression pattern (mutual information value=0.823098) with  --  CHR5  --  is the target gene of  --  ath-miR5998a
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