Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AtFAD3; FAD3
Type: Protein GRN ID: np22032 Name: AtFAD3; FAD3
Annotation: FAD3 | fatty acid desaturase 3
Gene Locus: AT2G29980
Gene Expression (Affy ATH1 probeset): 266865_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AtFAD3; FAD3  --  interacts with  --  FAD2
3 AtFAD3; FAD3  --  interacts with  --  LCV1
4 AtFAD3; FAD3  --  is the target gene of  --  ath-miR863-3p
5 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  AT4G37445
6 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  AT5G01430
7 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  TOM20-3
8 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  PRA1.A1
9 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  ASAR1; ATSAR2; ATSARA1C; SAR2
10 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  ATCESA3
11 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  AT3G09690
12 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  AT3G54120
13 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  PRA1.F4
14 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  ATPPT2; PPT2
15 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  APE1
16 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  SC3
17 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  AT5G11870
18 AtFAD3; FAD3  --  interacts with  --  LCV1  --  interacts with  --  ATSAR1; ATSAR1B; ATSARA1B; SAR1; SAR1B
19 AtFAD3; FAD3  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  ATMYB66; MYB66; WER; WER1
20 AtFAD3; FAD3  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  ath-miR5026
21 AtFAD3; FAD3  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  SE
22 AtFAD3; FAD3  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  AT1G23410
23 AtFAD3; FAD3  --  is the target gene of  --  ath-miR863-3p  --  inhibit the expression of  --  AT1G01240
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact