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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G66540
Type: Protein GRN ID: np35962 Name:
Annotation: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT5G66540
Gene Expression (Affy ATH1 probeset): 247046_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G66540  --  has similar expression pattern (mutual information value=0.819016) with  --  AT2G18220
3 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42
4 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
5 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530
6 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10
7 AT5G66540  --  has similar expression pattern (mutual information value=0.833152) with  --  AT5G38720
8 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240
9 AT5G66540  --  has similar expression pattern (mutual information value=0.847067) with  --  AT5G54910
10 AT5G66540  --  has similar expression pattern (mutual information value=0.819016) with  --  AT2G18220  --  has similar expression pattern (mutual information value=0.964885) with  --  AT1G23280
11 AT5G66540  --  has similar expression pattern (mutual information value=0.819016) with  --  AT2G18220  --  has similar expression pattern (mutual information value=0.870279) with  --  AT1G73180
12 AT5G66540  --  has similar expression pattern (mutual information value=0.819016) with  --  AT2G18220  --  has similar expression pattern (mutual information value=0.964464) with  --  AT1G77550
13 AT5G66540  --  has similar expression pattern (mutual information value=0.819016) with  --  AT2G18220  --  has similar expression pattern (mutual information value=0.826887) with  --  HSP60; HSP60-3B
14 AT5G66540  --  has similar expression pattern (mutual information value=0.819016) with  --  AT2G18220  --  has similar expression pattern (mutual information value=0.821207) with  --  AT5G19300
15 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  interacts with  --  CERK1; LYSM RLK1
16 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.15489) with  --  AT2G19385
17 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.11735) with  --  AT2G34260
18 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.896088) with  --  AT1G63250
19 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.896088) with  --  AT2G07750
20 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.927653) with  --  OWL1
21 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.833735) with  --  ATHB54; HB54
22 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.06745) with  --  ATRRP4; RRP4
23 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.986862) with  --  AT1G14060
24 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.14876) with  --  MEE67
25 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.14876) with  --  AT1G18320
26 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.889835) with  --  AT1G04945
27 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.841373) with  --  AT1G13810
28 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.91287) with  --  AT3G01160
29 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.05335) with  --  AT3G07750
30 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.883673) with  --  AT3G01800
31 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.979273) with  --  RPL3P
32 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.942047) with  --  AT3G13940
33 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.02089) with  --  AT3G15080
34 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.04903) with  --  ATPRMT3; PRMT3
35 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.867627) with  --  AT1G16740
36 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.04556) with  --  AT4G01990
37 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.866615) with  --  AT4G31790
38 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.06093) with  --  AT3G55605
39 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.932182) with  --  NRPA1
40 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.02232) with  --  AT5G09840
41 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.831492) with  --  AT5G39840
42 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.03154) with  --  RID2
43 AT5G66540  --  has similar expression pattern (mutual information value=0.873578) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.826464) with  --  CYCH;1
44 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.967772) with  --  ATKRS-1
45 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=1.06336) with  --  AT3G09720
46 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=1.31309) with  --  HSP60-3A
47 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.850109) with  --  EMB2788
48 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.810007) with  --  emb1796
49 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.836466) with  --  HD2C; HDT3
50 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.819566) with  --  ATMSL10; MSL10
51 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.834188) with  --  EMB3012
52 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.833288) with  --  NRPC2
53 AT5G66540  --  has similar expression pattern (mutual information value=0.834803) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.976641) with  --  LON1; LON_ARA_ARA
54 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.987124) with  --  AT1G08580
55 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.808804) with  --  ATPHB6; PHB6
56 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.808804) with  --  ATPHB1; PHB1
57 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.97524) with  --  AT1G79470
58 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.03291) with  --  PPR596
59 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.04586) with  --  AT3G03060
60 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.00386) with  --  AT1G71850
61 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.00445) with  --  ATPHB4; PHB4
62 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.968252) with  --  AT4G23620
63 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.10126) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
64 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.02803) with  --  AT4G31810
65 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=0.892747) with  --  AT3G49320
66 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.03) with  --  AT5G02050
67 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.12223) with  --  AT5G06550
68 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.10099) with  --  AT5G11240
69 AT5G66540  --  has similar expression pattern (mutual information value=0.86231) with  --  AT3G10530  --  has similar expression pattern (mutual information value=1.00082) with  --  AT5G14580
70 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  interacts with  --  ATP8; AtRCD1; CEO; CEO1; RCD1
71 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=0.846977) with  --  AT1G13160
72 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=0.800149) with  --  AT1G30070
73 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=0.829137) with  --  AT3G19360
74 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=1.01522) with  --  ATFKBP62; FKBP62; ROF1
75 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=0.836148) with  --  AT1G66070
76 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=0.878419) with  --  AT3G12340
77 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=0.830933) with  --  BOB1
78 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  has similar expression pattern (mutual information value=0.93016) with  --  AT4G37090
79 AT5G66540  --  has similar expression pattern (mutual information value=0.854318) with  --  TPR10  --  is modified by  --  LRR1
80 AT5G66540  --  has similar expression pattern (mutual information value=0.833152) with  --  AT5G38720  --  has similar expression pattern (mutual information value=0.935511) with  --  AT1G20300
81 AT5G66540  --  has similar expression pattern (mutual information value=0.833152) with  --  AT5G38720  --  has similar expression pattern (mutual information value=0.967459) with  --  AT5G27395
82 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  ATWRKY27; WRKY27
83 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  AT5G43520
84 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  ABI1
85 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  AT4G16670
86 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  RAP2.2
87 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  CIPK11; PKS5; SIP4; SNRK3.22
88 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  ATHB6
89 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  AT1G73920
90 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  interacts with  --  RAP2.4
91 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  has similar expression pattern (mutual information value=0.811318) with  --  AT4G30840
92 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  has similar expression pattern (mutual information value=0.876037) with  --  AT3G52040
93 AT5G66540  --  has similar expression pattern (mutual information value=0.963997) with  --  AT5G48240  --  has similar expression pattern (mutual information value=0.832745) with  --  AT5G52380
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