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Location:  Home > Details for node ATDEF1; PDF1A
Type: Protein GRN ID: np16444 Name: ATDEF1; PDF1A
Annotation: PDF1A, ATDEF1 | peptide deformylase 1A [EC:3.5.1.88]
Gene Locus: AT1G15390
Gene Expression (Affy ATH1 probeset): 262573_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Methionyl peptide
3 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate
4 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.805871) with  --  AT1G28530
5 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.810054) with  --  AT5G41970
6 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Methionyl peptide  --  is product (in catalytic reaction) of  --  ATDEF2; DEF2; PDF1B
7 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Methionyl peptide  --  is product (in catalytic reaction) of  --  Formyl-L-methionyl peptide
8 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  has product (in catalytic reaction)  --  10-Formyltetrahydrofolate
9 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  ATGCH; ATRIBA1; GCH; RFD1
10 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  D-Ribulose 5-phosphate
11 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  AT5G59750
12 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  AT2G22450
13 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  CER1
14 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  Long-chain aldehyde
15 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  GTP
16 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  AT3G07270
17 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  AT4G37560
18 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  Formamide
19 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  AT4G37550
20 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  AT5G47435
21 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  AT4G17360
22 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  ATSFGH; SFGH
23 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  S-Formylglutathione
24 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  CYP51; CYP51A2; CYP51G1; EMB1738
25 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  ARD4; ATARD4
26 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one
27 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  ARD1; ATARD1
28 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  ATARD2
29 ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate  --  is product (in catalytic reaction) of  --  ARD; ARD3; ATARD3
30 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.805871) with  --  AT1G28530  --  has similar expression pattern (mutual information value=0.84413) with  --  AT1G48570
31 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.805871) with  --  AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460
32 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.805871) with  --  AT1G28530  --  has similar expression pattern (mutual information value=0.803856) with  --  AT4G31210
33 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.805871) with  --  AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580
34 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.810054) with  --  AT5G41970  --  has similar expression pattern (mutual information value=0.8186) with  --  AT1G08360
35 ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.810054) with  --  AT5G41970  --  has similar expression pattern (mutual information value=0.80424) with  --  AT3G62940
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