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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G60050
Type: Protein GRN ID: np28376 Name:
Annotation: Pentatricopeptide repeat (PPR) superfamily protein
Gene Locus: AT3G60050
Gene Expression (Affy ATH1 probeset): 251451_s_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120
3 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.17291) with  --  AT2G18520
4 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.859534) with  --  AT2G25670
5 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.826814) with  --  RIP3
6 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970268) with  --  AT1G09590
7 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970268) with  --  AT1G09690
8 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970564) with  --  AT1G09660
9 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.919329) with  --  AT1G79200
10 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.09412) with  --  AT2G31725
11 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.846316) with  --  AT1G06530
12 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.950668) with  --  ATRBP47C; RBP47C
13 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.950668) with  --  ATRBP47C'; RBP47C'
14 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.826851) with  --  AT1G63980
15 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.01672) with  --  SYNC3
16 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.01672) with  --  EMB2755; SYNC1; SYNC1 ARATH
17 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.17357) with  --  CDC48C; emb1354
18 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.04035) with  --  AT3G02760
19 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.05712) with  --  AT3G22660
20 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.887988) with  --  AT3G19360
21 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.913281) with  --  HAT3.1
22 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.882841) with  --  VIL1; VRN5
23 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.983348) with  --  AT3G66652
24 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.994594) with  --  AT3G12340
25 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.945101) with  --  AT4G01990
26 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.839029) with  --  AT4G07950
27 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.839029) with  --  AT1G01210
28 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.22827) with  --  AT4G22350
29 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.22827) with  --  AT4G22285
30 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.0424) with  --  AT4G22000
31 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.858052) with  --  AT4G22720
32 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.868392) with  --  AT4G25210
33 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.936556) with  --  AT4G39160
34 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.02914) with  --  AT3G51270
35 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.0731) with  --  AT3G58840
36 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.884001) with  --  AT3G60040
37 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.960089) with  --  AT5G05210
38 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.808972) with  --  AT5G06110
39 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.918353) with  --  AT5G11310
40 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.952332) with  --  ABO1; AtELP1; ELO2
41 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.943076) with  --  NACA3
42 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.987895) with  --  AT5G14440
43 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.90449) with  --  AT5G18950
44 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.06708) with  --  AT5G42060
45 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.12524) with  --  AT5G50310
46 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.834053) with  --  NRPC1
47 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.06527) with  --  PNM1
48 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.04059) with  --  AT5G61310
49 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.98558) with  --  SDN3
50 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.980502) with  --  AT5G04320
51 AT3G60050  --  has similar expression pattern (mutual information value=0.884001) with  --  AT5G57120  --  interacts with  --  IMPA-2
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