Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G25660
Type: Protein GRN ID: np27072 Name:
Annotation: Amidase family protein [EC:6.3.5.6] [EC:6.3.5.7]
Gene Locus: AT3G25660
Gene Expression (Affy ATH1 probeset): 256728_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G25660  --  has product (in catalytic reaction)  --  Glutaminyl-tRNA
3 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)
4 AT3G25660  --  has similar expression pattern (mutual information value=0.982646) with  --  AT2G17570
5 AT3G25660  --  has similar expression pattern (mutual information value=1.18594) with  --  GATB
6 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800
7 AT3G25660  --  has similar expression pattern (mutual information value=0.931063) with  --  AT1G66430
8 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420
9 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190
10 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1
11 AT3G25660  --  has similar expression pattern (mutual information value=0.932996) with  --  AT5G35370
12 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1
13 AT3G25660  --  has product (in catalytic reaction)  --  Glutaminyl-tRNA  --  is product (in catalytic reaction) of  --  L-Glutamyl-tRNA(Gln)
14 AT3G25660  --  has product (in catalytic reaction)  --  Glutaminyl-tRNA  --  is product (in catalytic reaction) of  --  AT5G19720
15 AT3G25660  --  has product (in catalytic reaction)  --  Glutaminyl-tRNA  --  is product (in catalytic reaction) of  --  tRNA(Gln)
16 AT3G25660  --  has product (in catalytic reaction)  --  Glutaminyl-tRNA  --  is product (in catalytic reaction) of  --  OVA9
17 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  L-Aspartyl-tRNA(Asn)
18 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  EMB2755; SYNC1; SYNC1 ARATH
19 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  tRNA(Asn)
20 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  L-Asparagine
21 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  ATNS1; NS1; OVA8
22 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  ATNS2; NS2; SYNC2; SYNC2_ARATH
23 AT3G25660  --  has product (in catalytic reaction)  --  L-Asparaginyl-tRNA(Asn)  --  is product (in catalytic reaction) of  --  SYNC3
24 AT3G25660  --  has similar expression pattern (mutual information value=0.982646) with  --  AT2G17570  --  has product (in catalytic reaction)  --  Dehydrodolichol diphosphate
25 AT3G25660  --  has similar expression pattern (mutual information value=0.982646) with  --  AT2G17570  --  has similar expression pattern (mutual information value=0.898437) with  --  ATPRX Q
26 AT3G25660  --  has similar expression pattern (mutual information value=0.982646) with  --  AT2G17570  --  has similar expression pattern (mutual information value=0.915327) with  --  APG1; E37; IEP37; VTE3
27 AT3G25660  --  has similar expression pattern (mutual information value=1.18594) with  --  GATB  --  interacts with  --  AT4G15930
28 AT3G25660  --  has similar expression pattern (mutual information value=1.18594) with  --  GATB  --  has similar expression pattern (mutual information value=1.08801) with  --  CPN60B; LEN1
29 AT3G25660  --  has similar expression pattern (mutual information value=1.18594) with  --  GATB  --  has similar expression pattern (mutual information value=1.12236) with  --  EMB2369
30 AT3G25660  --  has similar expression pattern (mutual information value=1.18594) with  --  GATB  --  has similar expression pattern (mutual information value=1.11213) with  --  AT5G55220
31 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.50163) with  --  AT2G37660
32 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.22188) with  --  AT2G24060
33 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.52165) with  --  DEGP2; EMB3117
34 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.06878) with  --  AOR
35 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.3104) with  --  ABC4
36 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=0.914802) with  --  Z-ISO; Z-ISO1.1; Z-ISO1.2
37 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.21813) with  --  AT1G14030
38 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.08907) with  --  ATSCO1; ATSCO1/CPEF-G; SCO1
39 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.30847) with  --  FUG1
40 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.31505) with  --  ALB-1V; ALB1; CHLD; PDE166; V157
41 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.08516) with  --  AT3G01060
42 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.18036) with  --  PTAC13
43 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=0.817051) with  --  ABCI6; ATNAP7; NAP7
44 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.39511) with  --  AT3G08740
45 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.01175) with  --  ATAB2
46 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.28361) with  --  CCB1
47 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.28476) with  --  CP33; PDE322
48 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.20808) with  --  ANTR2; PHT4;4
49 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.31194) with  --  emb2726
50 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.49724) with  --  FAD6; FADC; SFD4
51 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.1786) with  --  MRL1; PDE346
52 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.14247) with  --  ATGR2; EMB2360; GR
53 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=0.876813) with  --  AT3G56160
54 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.26222) with  --  ATEGY2; EGY2
55 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.02094) with  --  AT5G14460
56 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=0.983222) with  --  ATSS1; SS1; SSI; SSI1
57 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.14899) with  --  DXR; PDE129
58 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.15067) with  --  AT4G36390
59 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.41539) with  --  EMB3136
60 AT3G25660  --  has similar expression pattern (mutual information value=1.45063) with  --  AT1G12800  --  has similar expression pattern (mutual information value=1.2711) with  --  PHR2
61 AT3G25660  --  has similar expression pattern (mutual information value=0.931063) with  --  AT1G66430  --  interacts with  --  AT1G15710
62 AT3G25660  --  has similar expression pattern (mutual information value=0.931063) with  --  AT1G66430  --  has product (in catalytic reaction)  --  D-Fructose 6-phosphate
63 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.07161) with  --  AT2G27680
64 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.16478) with  --  ABC1; ATSIG1; ATSIG2; SIG1; SIG2; SIGA; SIGB
65 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=0.988831) with  --  NDF5
66 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.09502) with  --  ATCYP38; CYP38
67 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.14552) with  --  RPL15
68 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.05523) with  --  AT3G29185
69 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=0.803862) with  --  54CP; CPSRP54; FFC; SRP54CP
70 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.10137) with  --  AT5G54600
71 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.05994) with  --  RPL9
72 AT3G25660  --  has similar expression pattern (mutual information value=1.07614) with  --  AT5G46420  --  has similar expression pattern (mutual information value=1.08394) with  --  PSRP5
73 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=1.1358) with  --  CHL-CPN10; CPN10
74 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=0.805167) with  --  AT1G27000
75 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=1.67369) with  --  PRPL11
76 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=0.946876) with  --  AT1G53520
77 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=1.72855) with  --  AT3G13120
78 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=1.25981) with  --  SAMC1; SAMT1
79 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=1.29582) with  --  CHL I2; CHLI-2; CHLI2
80 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=1.02584) with  --  AT5G66530
81 AT3G25660  --  has similar expression pattern (mutual information value=1.2628) with  --  AT5G47190  --  has similar expression pattern (mutual information value=1.22247) with  --  AT5G14910
82 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=1.09383) with  --  AT2G04039
83 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=0.868995) with  --  mtLPD1
84 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=0.955967) with  --  ZFN1
85 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=1.20668) with  --  CH-42; CH42; CHL11; CHLI-1; CHLI1
86 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=0.81307) with  --  SQD1
87 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=0.963337) with  --  AT3G60750
88 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=1.17219) with  --  CYP20-3; ROC4
89 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=1.13451) with  --  AT3G61870
90 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=0.922709) with  --  SBE2.2
91 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=1.20546) with  --  CLPP4; NCLPP4
92 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has similar expression pattern (mutual information value=0.965033) with  --  AT5G58330
93 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  has product (in catalytic reaction)  --  ADP-glucose
94 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  interacts with  --  Phytochrome B (PhyB)
95 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  interacts with  --  AT3G09250
96 AT3G25660  --  has similar expression pattern (mutual information value=1.10212) with  --  ADG1; APS1  --  interacts with  --  APL4
97 AT3G25660  --  has similar expression pattern (mutual information value=0.932996) with  --  AT5G35370  --  has similar expression pattern (mutual information value=0.86624) with  --  OVA4
98 AT3G25660  --  has similar expression pattern (mutual information value=0.932996) with  --  AT5G35370  --  has similar expression pattern (mutual information value=0.938682) with  --  STOP1
99 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.43881) with  --  AT1G62780
100 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.10064) with  --  AT1G68590
101 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.27913) with  --  AT1G14345
102 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.35129) with  --  GAPA-2
103 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.16774) with  --  AT1G44000
104 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.08733) with  --  AT3G04760
105 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.56918) with  --  HEME2
106 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.15573) with  --  HEMG1; PPO1; PPOX
107 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.57974) with  --  AT4G12060
108 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.46199) with  --  ACP4
109 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.41513) with  --  PSB28
110 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=0.82458) with  --  FTSZ2-2
111 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.29813) with  --  SBPASE
112 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.31466) with  --  AT3G58140
113 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.18657) with  --  AT5G42070
114 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=0.974501) with  --  LUT2
115 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.09199) with  --  GSA1
116 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.35358) with  --  ATG4; CHLG; G4; PDE325
117 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.54618) with  --  AT5G28500
118 AT3G25660  --  has similar expression pattern (mutual information value=1.5129) with  --  LIL3:1  --  has similar expression pattern (mutual information value=1.14453) with  --  NTRC
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact