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Location:  Home > Details for node AT3G58840
Type: Protein GRN ID: np29343 Name:
Annotation: Tropomyosin-related
Gene Locus: AT3G58840
Gene Expression (Affy ATH1 probeset): 251556_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G58840  --  interacts with  --  AT1G06530
3 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760
4 AT3G58840  --  has similar expression pattern (mutual information value=0.838915) with  --  AT3G13190
5 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652
6 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120
7 AT3G58840  --  interacts with  --  AT1G06530  --  has similar expression pattern (mutual information value=0.860508) with  --  ATMAP70-3; MAP70-3
8 AT3G58840  --  interacts with  --  AT1G06530  --  has similar expression pattern (mutual information value=0.818732) with  --  AT1G12830
9 AT3G58840  --  interacts with  --  AT1G06530  --  has similar expression pattern (mutual information value=0.817885) with  --  AT5G53800
10 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.939673) with  --  AT2G33840
11 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.939673) with  --  AT1G28350
12 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.881518) with  --  AT2G25670
13 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.835627) with  --  RIP3
14 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=1.09103) with  --  SYNC3
15 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=1.09103) with  --  EMB2755; SYNC1; SYNC1 ARATH
16 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.923653) with  --  AT3G24080
17 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=1.17198) with  --  AT5G05210
18 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.927914) with  --  NACA3
19 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.872898) with  --  PSL4
20 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.968976) with  --  PNM1
21 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.901343) with  --  SDN3
22 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has similar expression pattern (mutual information value=0.895698) with  --  AT5G20600
23 AT3G58840  --  has similar expression pattern (mutual information value=0.943233) with  --  AT3G02760  --  has product (in catalytic reaction)  --  L-Histidyl-tRNA(His)
24 AT3G58840  --  has similar expression pattern (mutual information value=0.838915) with  --  AT3G13190  --  has similar expression pattern (mutual information value=0.840503) with  --  AT3G17160
25 AT3G58840  --  has similar expression pattern (mutual information value=0.838915) with  --  AT3G13190  --  has similar expression pattern (mutual information value=0.821962) with  --  ATCBP20
26 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  has similar expression pattern (mutual information value=0.871227) with  --  AT2G24990
27 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  has similar expression pattern (mutual information value=0.871227) with  --  AT5G37350
28 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  has similar expression pattern (mutual information value=0.84516) with  --  emb1796
29 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  has similar expression pattern (mutual information value=0.824576) with  --  NRPC1
30 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  interacts with  --  AT1G66500
31 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  interacts with  --  CLPS5
32 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  interacts with  --  ATFIP1[V]; ATFIPS5; FIP1[V]; FIPS5
33 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  interacts with  --  nPAP; PAP(IV)
34 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  interacts with  --  CSTF64
35 AT3G58840  --  has similar expression pattern (mutual information value=0.895299) with  --  AT3G66652  --  interacts with  --  ATCPSF30; CPSF30
36 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.17291) with  --  AT2G18520
37 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970268) with  --  AT1G09590
38 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970268) with  --  AT1G09690
39 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.970564) with  --  AT1G09660
40 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.919329) with  --  AT1G79200
41 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.09412) with  --  AT2G31725
42 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.950668) with  --  ATRBP47C; RBP47C
43 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.950668) with  --  ATRBP47C'; RBP47C'
44 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.826851) with  --  AT1G63980
45 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.17357) with  --  CDC48C; emb1354
46 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.05712) with  --  AT3G22660
47 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.887988) with  --  AT3G19360
48 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.913281) with  --  HAT3.1
49 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.882841) with  --  VIL1; VRN5
50 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.994594) with  --  AT3G12340
51 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.945101) with  --  AT4G01990
52 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.839029) with  --  AT4G07950
53 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.839029) with  --  AT1G01210
54 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.22827) with  --  AT4G22350
55 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.22827) with  --  AT4G22285
56 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.0424) with  --  AT4G22000
57 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.858052) with  --  AT4G22720
58 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.868392) with  --  AT4G25210
59 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.936556) with  --  AT4G39160
60 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.02914) with  --  AT3G51270
61 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.884001) with  --  AT3G60040
62 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.884001) with  --  AT3G60050
63 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.808972) with  --  AT5G06110
64 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.918353) with  --  AT5G11310
65 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.952332) with  --  ABO1; AtELP1; ELO2
66 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.987895) with  --  AT5G14440
67 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.90449) with  --  AT5G18950
68 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.06708) with  --  AT5G42060
69 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.12524) with  --  AT5G50310
70 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=1.04059) with  --  AT5G61310
71 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  has similar expression pattern (mutual information value=0.980502) with  --  AT5G04320
72 AT3G58840  --  has similar expression pattern (mutual information value=1.0731) with  --  AT5G57120  --  interacts with  --  IMPA-2
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