The Online Data Resource for Review:
Phenylpropanoids and plant defense -- an updated genomic perspective   
 
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Core phenylpropanoid pathway > 4-Coumarate: Coenzyme A ligase (4CL)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|152177| e_gw1.356.14.1 476  
N/A
 N/A  Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Phypa1_1|113172| e_gw1.6.71.1 552  
N/A
 N/A  Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Phypa1_1|117032| e_gw1.18.145.1 515  
N/A
 N/A  Top 5 Hits: [ Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Phypa1_1|140413| e_gw1.167.67.1 539  
N/A
 N/A  Top 5 Hits: [ 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. californica E-value=0; 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 1 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 1 OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|150981| e_gw1.325.2.1 563  
N/A
 N/A  Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
jgi|Phypa1_1|104959| estExt_fgenesh1_pm.C _200030 533  
N/A
 N/A  Top 5 Hits: [ 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. californica E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 1 OS=Physcomitrella patens subsp. magdalenae E-value=0; ] 
jgi|Phypa1_1|233094| estExt_fgenesh2_pg.C _710053 527  
N/A
 N/A  Top 5 Hits: [ 4-coumarate:coenzyme A ligase 3 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 3 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 3 OS=Physcomitrella patens subsp. californica E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. californica E-value=0; ]  ABV60449.1 Mogi et al.,2009
jgi|Phypa1_1|122068| e_gw1.38.65.1 535  
N/A
 N/A  Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 

Core phenylpropanoid pathway > Cinnamate 4-hydroxylase (C4H)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|150408| e_gw1.315.25.1 497  
N/A
 N/A  Top 5 Hits: [ Cinnamic acid 4-hydroxylase OS=Ginkgo biloba E-value=0; Cinnamate-4-hydroxylase OS=Rubus occidentalis E-value=0; Cinnamate-4-hydroxylase OS=Rubus sp. SSL-2007 E-value=0; Cinnamic acid 4-hydroxylase OS=Humulus lupulus E-value=0; Cinnamate-4-hydroxylase OS=Rubus coreanus E-value=0; ] 
jgi|Phypa1_1|149501| e_gw1.298.22.1 503  
N/A
 N/A  Top 5 Hits: [ Cinnamate 4-hydroxylase OS=Populus trichocarpa x Populus deltoides E-value=0; Cytochrome P450 cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Trans-cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Cinnamic acid hydroxylase OS=Malus domestica E-value=0; Cinnamate-4-hydroxylase OS=Rubus occidentalis E-value=0; ] 
jgi|Phypa1_1|140533| e_gw1.168.38.1 501  
N/A
 N/A  Top 5 Hits: [ Cinnamic acid 4-hydroxylase OS=Ginkgo biloba E-value=0; Cinnamate 4-hydroxylase OS=Populus trichocarpa x Populus deltoides E-value=0; Cytochrome P450 cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Trans-cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Trans-cinnamate 4-hydroxylase OS=Pinus taeda E-value=0; ] 

Core phenylpropanoid pathway > L-Phenylalanine ammonia-lyase (PAL)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|180561| estExt_gwp_gw1.C_430 075 710  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|123116| e_gw1.43.91.1 710  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|123073| e_gw1.43.93.1 710  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|177179| estExt_gwp_gw1.C_220 001 714  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|178793| estExt_gwp_gw1.C_320 152 714  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|154075| e_gw1.410.10.1 219  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|121522| e_gw1.36.41.1 702  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Diphasiastrum tristachyum E-value=0; ] 
jgi|Phypa1_1|176961| estExt_gwp_gw1.C_200 169 715  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|181734| estExt_gwp_gw1.C_520 019 714  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|113035| e_gw1.5.74.1 728  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|156018| e_gw1.500.3.1 714  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|228135| estExt_Genewise1.C_4 940001 675  
N/A
 N/A  Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; Phenylalanine ammonia-lyase OS=Physcomitrella patens subsp. patens E-value=0; ] 

Flavonoid core > Chalcone isomerase (CHI)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|127780| e_gw1.67.77.1 217  
N/A
 N/A  Top 5 Hits: [ Chalcone isomerase-like protein OS=Populus trichocarpa E-value=9e-39; Chalcone isomerase, putative OS=Arabidopsis thaliana E-value=3e-37; Chalcone isomerase, putative; 94270-95700 OS=Arabidopsis thaliana E-value=5e-37; Putative chalcone isomerase 3 OS=Glycine max E-value=5e-35; T3F20.16 protein OS=Arabidopsis thaliana E-value=8e-33; ] 
jgi|Phypa1_1|233922| estExt_fgenesh2_pg.C _1100007 212  
N/A
 N/A  Top 5 Hits: [ Chalcone isomerase-like protein OS=Populus trichocarpa E-value=2e-30; Chalcone isomerase OS=Garcinia mangostana E-value=3e-30; Chalcone-flavanone isomerase family protein, expressed OS=Oryza sativa subsp. japonica E-value=1e-28; Os12g0115700 protein OS=Oryza sativa subsp. japonica E-value=1e-28; Chalcone-flavanone isomerase OS=Elaeis guineensis var. tenera E-value=2e-27; ] 
jgi|Phypa1_1|137498| e_gw1.138.78.1 200  
N/A
 N/A  Top 5 Hits: [ Chalcone isomerase OS=Zea mays E-value=2e-55; Os07g0571600 protein OS=Oryza sativa subsp. japonica E-value=2e-51; Putative chalcone isomerase OS=Solanum lycopersicum E-value=6e-40; ] 
jgi|Phypa1_1|167842| estExt_fgenesh1_pg.C _1590004 209  
N/A
 N/A  Top 5 Hits: [ Chalcone isomerase OS=Garcinia mangostana E-value=3e-29; Chalcone isomerase-like protein OS=Populus trichocarpa E-value=3e-27; Chalcone--flavonone isomerase, putative OS=Ricinus communis E-value=8e-27; Chalcone-flavanone isomerase family protein, expressed OS=Oryza sativa subsp. japonica E-value=2e-25; Chalcone-flavanone isomerase OS=Elaeis guineensis var. tenera E-value=5e-25; ] 

Flavonoid core > Chalcone synthase (CHS)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|149790| e_gw1.304.37.1 418  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase homolog PrChS1 OS=Pinus radiata E-value=0; Chalcone synthase, putative OS=Ricinus communis E-value=0; Chalcone synthase family protein OS=Arabis gemmifera E-value=0; Chalcone synthase family protein OS=Arabidopsis thaliana E-value=0; Chalcone synthase family protein OS=Arabis gemmifera E-value=0; ] 
jgi|Phypa1_1|149180| e_gw1.292.29.1 389  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Stilbenecarboxylate synthase 1 OS=Marchantia polymorpha E-value=0; Chalcone synthase OS=Fragaria ananassa E-value=0; ] 
jgi|Phypa1_1|149692| e_gw1.303.70.1 389  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Stilbenecarboxylate synthase 1 OS=Marchantia polymorpha E-value=0; Chalcone synthase OS=Fragaria ananassa E-value=0; ] 
jgi|Phypa1_1|149682| e_gw1.303.67.1 389  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Stilbenecarboxylate synthase 1 OS=Marchantia polymorpha E-value=0; Chalcone synthase OS=Fragaria ananassa E-value=0; ] 
jgi|Phypa1_1|118540| e_gw1.25.174.1 411  
N/A
 N/A  Top 5 Hits: [ Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=5e-82; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=2e-81; Chalcone synthase OS=Physcomitrella patens E-value=1e-79; Chalcone synthase OS=Ginkgo biloba E-value=2e-78; Chalcone synthase OS=Iris germanica E-value=4e-78; ] 
jgi|Phypa1_1|104998| estExt_fgenesh1_pm.C _220002 397  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Aromatic polyketide synthase OS=Rubus idaeus E-value=0; PpCHS ]  ABB84527.1 Jiang et al.,2006
jgi|Phypa1_1|109184| estExt_fgenesh1_pm.C _4250003 377  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Chalcone synthase-like OS=Marchantia paleacea var. diptera E-value=0; Chalcone synthase-like OS=Marchantia paleacea var. diptera E-value=0; ] 
jgi|Phypa1_1|110814| e_gw1.1.371.1 402  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Stilbenecarboxylate synthase 1 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like OS=Marchantia paleacea var. diptera E-value=0; ] 
jgi|Phypa1_1|122336| e_gw1.39.179.1 402  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Chalcone synthase-like OS=Marchantia paleacea var. diptera E-value=0; Chalcone synthase-like OS=Marchantia paleacea var. diptera E-value=0; ] 
jgi|Phypa1_1|152430| e_gw1.365.20.1 389  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Chalcone synthase OS=Fragaria ananassa E-value=0; Stilbenecarboxylate synthase 1 OS=Marchantia polymorpha E-value=0; ] 
jgi|Phypa1_1|201011| estExt_gwp_gw1.C_500 0002 397  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Aromatic polyketide synthase OS=Rubus idaeus E-value=0; Chalcone synthase OS=Malus domestica E-value=0; ] 
jgi|Phypa1_1|155379| e_gw1.463.9.1 398  
N/A
 N/A  Top 5 Hits: [ Chalcone synthase OS=Physcomitrella patens E-value=0; Stilbenecarboxylate synthase 2 OS=Marchantia polymorpha E-value=0; Chalcone synthase-like polyketide synthase OS=Huperzia serrata E-value=0; Aromatic polyketide synthase OS=Rubus idaeus E-value=0; Stilbenecarboxylate synthase 1 OS=Marchantia polymorpha E-value=0; ] 

Flavonols, anthocyanidins > 2-Oxoglutarate-dependent dioxygenase (2Og)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|115293| e_gw1.13.327.1 368  
N/A
 N/A  Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase OS=Zea mays E-value=4e-56; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=8e-55; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=3e-53; ] 
jgi|Phypa1_1|122538| e_gw1.40.91.1 347  
N/A
 N/A  Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=2e-60; Genomic DNA, chromosome 3, P1 clone:MHC9 OS=Arabidopsis thaliana E-value=6e-60; 1-aminocyclopropane-1-carboxylate oxidase, putative OS=Ricinus communis E-value=1e-59; 1-aminocyclopropane-1-carboxylate oxidase, putative OS=Ricinus communis E-value=5e-59; F3H7.17 protein OS=Arabidopsis thaliana E-value=2e-58; ] 
jgi|Phypa1_1|129299| e_gw1.75.91.1 346  
N/A
 N/A  Top 5 Hits: [ Ethylene-forming enzyme OS=Picea glauca E-value=2e-47; 1-aminocyclopropane-1-carboxylate oxidase, putative OS=Ricinus communis E-value=2e-44; Flavonol synthase/flavanone 3-hydroxylase OS=Zea mays E-value=3e-44; Leucoanthocyanidin dioxygenase-like protein OS=Arabidopsis thaliana E-value=1e-43; Leucoanthocyanidin dioxygenase, putative; 41415-43854 OS=Arabidopsis thaliana E-value=2e-43; ] 
jgi|Phypa1_1|146815| e_gw1.249.22.1 346  
N/A
 N/A  Top 5 Hits: [ 1-aminocyclopropane-1-carboxylate oxidase, putative OS=Ricinus communis E-value=6e-51; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=6e-51; Flavonol synthase, putative OS=Ricinus communis E-value=7e-51; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=1e-49; ] 
jgi|Phypa1_1|15388|g w1.57.30.1 319  
N/A
 N/A  Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=4e-58; Leucoanthocyanidin dioxygenase-like protein OS=Arabidopsis thaliana E-value=3e-56; Leucoanthocyanidin dioxygenase-like protein OS=Arabidopsis thaliana E-value=2e-55; ] 
jgi|Phypa1_1|108581| estExt_fgenesh1_pm.C _2870008 342  
N/A
 N/A  Top 5 Hits: [ Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=9e-98; Strong similarity to naringenin 3-dioxygenase OS=Arabidopsis thaliana E-value=2e-96; Flavonol synthase/flavanone 3-hydroxylase OS=Zea mays E-value=9e-95; Os06g0162500 protein OS=Oryza sativa subsp. japonica E-value=1e-92; Naringenin 3-dioxygenase like protein OS=Brassica napus E-value=2e-79; ] 
jgi|Phypa1_1|162685| estExt_fgenesh1_pg.C _460080 353  
N/A
 N/A  Top 5 Hits: [ 1-aminocyclopropane-1-carboxylate oxidase, putative OS=Ricinus communis E-value=3e-60; T30F21.12 protein OS=Arabidopsis thaliana E-value=8e-58; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=3e-57; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=3e-57; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=4e-56; ] 
jgi|Phypa1_1|171275| estExt_fgenesh1_pg.C _2830044 318  
N/A
 N/A  Top 5 Hits: [ 1-aminocyclopropane-1-carboxylate oxidase, putative OS=Ricinus communis E-value=4e-51; Flavonol synthase OS=Camellia sinensis E-value=4e-49; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=7e-49; F3H7.16 protein OS=Arabidopsis thaliana E-value=9e-49; Os01g0832600 protein OS=Oryza sativa subsp. japonica E-value=2e-48; ] 
jgi|Phypa1_1|220256| estExt_Genewise1.C_1 910057 329  
N/A
 N/A  Subfamily: F3betaH; putative; Top 5 Hits: [ Os09g0248900 protein OS=Oryza sativa subsp. japonica E-value=1e-98; Putative flavonol synthase-like protein OS=Euphorbia esula E-value=2e-97; Os09g0245500 protein OS=Oryza sativa subsp. japonica E-value=6e-97; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=5e-96; 2-oxoglutarate-dependent dioxygenase OS=Populus trichocarpa E-value=1e-95; ] 

Flavonols, anthocyanidins > Dihydroflavonol reductase (DFR)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|184659| estExt_gwp_gw1.C_750 108 318  
N/A
 N/A  May belong to CAD,DFR families; Top 5 Hits: [ Os01g0528800 protein OS=Oryza sativa subsp. japonica E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=1e-99; Alcohol dehydrogenase-like protein OS=Ocimum basilicum E-value=5e-99; Cinnamyl alcohol dehydrogenase OS=Elaeis guineensis var. tenera E-value=2e-98; ] 
jgi|Phypa1_1|193687| estExt_gwp_gw1.C_202 0001 339  
N/A
 N/A  Top 5 Hits: [ Dihydroflavonol-4-reductase OS=Zea mays E-value=3e-92; Dihydroflavonal-4-reductase, putative OS=Ricinus communis E-value=2e-89; Putative dihydroflavonal-4-reductase OS=Oryza sativa E-value=2e-88; Uncharacterized protein At4g33360.2 OS=Arabidopsis thaliana E-value=2e-80; Os03g0184550 protein OS=Oryza sativa subsp. japonica E-value=4e-63; ] 
jgi|Phypa1_1|215362| estExt_Genewise1.C_1 140128 329  
N/A
 N/A  May belong to CCR,DFR families; Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=6e-90; Cinnamoyl-CoA reductase OS=Jatropha curcas E-value=5e-88; Putative reductase; 61412-62628 OS=Arabidopsis thaliana E-value=2e-86; Os01g0127500 protein OS=Oryza sativa subsp. japonica E-value=2e-78; Dihydroflavonol 4-reductase, putative OS=Arabidopsis thaliana E-value=3e-76; ] 
jgi|Phypa1_1|138124| e_gw1.144.123.1 356  
N/A
 N/A  May belong to CCR,DFR families; Top 5 Hits: [ At4g35420 OS=Arabidopsis thaliana E-value=4e-99; Dihydroflavonol-4-reductase OS=Zea mays E-value=7e-97; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=7e-97; Dihydro-flavanoid reductase-like protein OS=Zea mays E-value=2e-95; Dihydroflavonol-4-reductase OS=Zea mays E-value=3e-95; ] 

Flavonols, anthocyanidins > Flavonoid 3',5'-hydroxylase (F3'5'H)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|22681|g w1.276.47.1 465  
N/A
 N/A  putative; Top 5 Hits: [ Cytochrome P450 OS=Capsicum chinense E-value=6e-80; Flavonoid 3',5'-hydroxylase OS=Solanum tuberosum E-value=8e-79; Flavonoid 3',5'-hydroxylase OS=Petunia interior E-value=2e-78; Flavonoid 3',5'-hydroxylase OS=Petunia guarapuavensis E-value=3e-78; Cytochrome P450 OS=Populus trichocarpa E-value=5e-78; ] 
jgi|Phypa1_1|115760| e_gw1.14.225.1 482  
N/A
 N/A  putative; Top 5 Hits: [ Flavonoid 3',5'-hydroxylase OS=Petunia interior E-value=5e-93; Flavonoid 3',5'-hydroxylase OS=Petunia hybrida E-value=1e-92; Flavonoid 3', 5'-hydroxylase OS=Petunia integrifolia var. integrifolia E-value=1e-92; Flavonoid-3',5'-hydroxylase OS=Petunia hybrida E-value=2e-92; Cytochrome P450 OS=Petunia hybrida E-value=3e-92; ] 
jgi|Phypa1_1|167379| estExt_fgenesh1_pg.C _1440031 523  
N/A
 N/A  putative; Top 5 Hits: [ Cytochrome P450 monooxygenase CYP92A29 OS=Medicago truncatula E-value=7e-88; Flavonoid 3',5'-hydroxylase OS=Petunia axillaris subsp. subandina E-value=8e-86; Flavonoid 3',5'-hydroxylase OS=Petunia axillaris subsp. axillaris E-value=8e-86; Flavonoid 3',5'-hydroxylase OS=Petunia parodii E-value=8e-86; Flavonoid 3',5'-hydroxylase OS=Petunia occidentalis E-value=8e-86; ] 

Flavonols, anthocyanidins > Flavonoid 3'-hydroxylase (F3'H)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|186336| estExt_gwp_gw1.C_910 162 519  
N/A
 N/A  putative; Top 5 Hits: [ p-coumaroyl shikimate 3'-hydroxylase OS=Populus trichocarpa E-value=1e-86; Os09g0264400 protein OS=Oryza sativa subsp. japonica E-value=2e-86; Flavonoid 3-hydroxylase, putative OS=Ricinus communis E-value=3e-86; Flavonoid 3-hydroxylase, putative OS=Ricinus communis E-value=7e-86; Flavonoid 3-hydroxylase, putative OS=Ricinus communis E-value=3e-85; ] 
jgi|Phypa1_1|211162| estExt_Genewise1.C_6 80090 494  
N/A
 N/A  putative; Top 5 Hits: [ Flavonoid 3'-hydroxylase OS=Tagetes erecta E-value=6e-89; Flavonoid 3` hydroxylase 2 protein OS=Brassica rapa subsp. campestris E-value=2e-88; Flavonoid 3'-hydroxylase OS=Matthiola incana E-value=2e-88; Flavonoid 3'-hydroxylase OS=Vitis vinifera E-value=1e-87; Flavonoid 3'-hydroxylase OS=Brassica napus E-value=3e-87; ] 
jgi|Phypa1_1|181978| estExt_gwp_gw1.C_540 041 464  
N/A
 N/A  putative; Top 5 Hits: [ Flavonoid 3'-hydroxylase OS=Lobelia erinus E-value=0; Flavonoid 3' hydroxylase IIb OS=Malus domestica E-value=0; Flavonoid 3' hydroxylase IIa OS=Malus domestica E-value=7e-99; Flavonoid 3' hydroxylase OS=Malus domestica E-value=1e-98; Flavonoid 3'-hydroxylase OS=Garcinia mangostana E-value=2e-98; ] 
jgi|Phypa1_1|31920|g w1.10.191.1 486  
N/A
 N/A  putative; Top 5 Hits: [ Cytochrome P450 OS=Populus trichocarpa E-value=1e-79; Cytochrome P450 OS=Populus trichocarpa E-value=2e-79; Flavonoid 3-hydroxylase, putative OS=Ricinus communis E-value=3e-79; Flavonoid 3' hydroxylase OS=Tricyrtis hirta E-value=4e-79; Flavonoid 3'-hydroxylase OS=Tagetes erecta E-value=8e-79; ] 
jgi|Phypa1_1|110816| e_gw1.1.355.1 516  
N/A
 N/A  putative; Top 5 Hits: [ Flavonoid 3'-hydroxylase OS=Echinops bannaticus E-value=5e-72; Cytochrome P450 OS=Petunia hybrida E-value=8e-70; Flavonoid 3'-hydroxylase OS=Cichorium intybus E-value=1e-69; Cytochrome P450 OS=Triticum aestivum E-value=1e-69; Flavonoid 3'-hydroxylase OS=Pelargonium hortorum E-value=3e-69; ] 
jgi|Phypa1_1|31879|g w1.198.77.1 504  
N/A
 N/A  putative; Top 5 Hits: [ Cytochrome P450-dependent monooxygenase OS=Selaginella moellendorffii E-value=1e-78; Flavonoid 3'-hydroxylase OS=Matthiola incana E-value=2e-77; Cytochrome P450 OS=Populus trichocarpa E-value=3e-77; Cytochrome P450 OS=Populus trichocarpa E-value=6e-77; Cytochrome P450 OS=Populus trichocarpa E-value=8e-77; ] 
jgi|Phypa1_1|133330| e_gw1.102.70.1 548  
N/A
 N/A  putative; Top 5 Hits: [ Flavonoid 3'-hydroxylase OS=Cichorium intybus E-value=6e-70; Flavonoid 3'-hydroxylase OS=Hieracium pilosella E-value=4e-68; Flavonoid 3'-hydroxylase OS=Pelargonium hortorum E-value=7e-68; Flavonoid 3'-hydroxylase OS=Tagetes erecta E-value=2e-67; Flavonoid 3'-hydroxylase OS=Echinops bannaticus E-value=2e-67; ] 

Lignin > Cinnamyl alcohol dehydrogenase (CAD)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|165249| estExt_fgenesh1_pg.C _840117 356  
N/A
 N/A  Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=2e-93; Cinnamyl alcohol dehydrogenase OS=Elaeis guineensis var. tenera E-value=2e-93; Mannitol dehydrogenase OS=Zea mays E-value=2e-92; Mannitol dehydrogenase OS=Zea mays E-value=2e-87; ] 
jgi|Phypa1_1|184659| estExt_gwp_gw1.C_750 108 318  
N/A
 N/A  May belong to CAD,DFR families; Top 5 Hits: [ Os01g0528800 protein OS=Oryza sativa subsp. japonica E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=1e-99; Alcohol dehydrogenase-like protein OS=Ocimum basilicum E-value=5e-99; Cinnamyl alcohol dehydrogenase OS=Elaeis guineensis var. tenera E-value=2e-98; ] 

Lignin > Caffeoyl Coenzyme A 3-O-methyl-transferase (CCOMT)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|143295| e_gw1.201.130.1 283  
N/A
 N/A  Top 5 Hits: [ Os08g0154000 protein OS=Oryza sativa subsp. japonica E-value=4e-79; O-methyltransferase, putative OS=Ricinus communis E-value=6e-79; Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays E-value=3e-77; Trans-caffeoyl-coa 3-o-methyltransferase-like protein OS=Populus trichocarpa E-value=1e-71; O-methyltransferase, family 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) E-value=2e-63; ] 
jgi|Phypa1_1|116394| e_gw1.16.6.1 254  
N/A
 N/A  Top 5 Hits: [ Caffeoyl-CoA O-methyltransferase OS=Chamaecyparis formosensis E-value=1e-93; Caffeoyl-CoA O-methyltransferase OS=Taiwania cryptomerioides E-value=2e-93; Caffeoyl coenzyme A 3-O-methyltransferase 1 OS=Leucaena glauca E-value=3e-93; Caffeoyl-CoA O-methyltransferase 2 OS=Eucalyptus camaldulensis E-value=3e-93; Caffeoyl-CoA 3-O methyltransferase OS=Coffea canephora E-value=4e-93; ] 

Lignin > Cinnamoyl Coenzyme A reductase (CCR)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|111821| e_gw1.2.225.1 343  
N/A
 N/A  Top 5 Hits: [ Cinnamoyl CoA reductase (Fragment) OS=Picea abies E-value=0; Cinnamoyl CoA reductase OS=Fragaria ananassa E-value=0; Cinnamoyl-CoA reductase OS=Vaccinium corymbosum E-value=1e-99; Cinnamoyl CoA reductase OS=Solanum tuberosum E-value=3e-98; Cinnamoyl-CoA reductase OS=Solanum lycopersicum E-value=3e-97; ] 
jgi|Phypa1_1|143208| e_gw1.200.41.1 321  
N/A
 N/A  Top 5 Hits: [ Cinnamoyl CoA reductase (Fragment) OS=Picea abies E-value=6e-66; Cinnamoyl-CoA reductase OS=Pinus taeda E-value=7e-64; Cinnamoyl-CoA reductase OS=Pinus massoniana E-value=2e-63; Cinnamoyl-CoA reductase OS=Solanum lycopersicum E-value=6e-62; Putative cinnamoyl-CoA reductase OS=Capsicum annuum E-value=7e-62; ] 
jgi|Phypa1_1|122374| e_gw1.39.116.1 309  
N/A
 N/A  Top 5 Hits: [ Cinnamoyl CoA reductase (Fragment) OS=Picea abies E-value=6e-68; Cinnamoyl-CoA reductase OS=Pinus massoniana E-value=5e-65; Cinnamoyl-CoA reductase OS=Pinus taeda E-value=8e-65; Putative cinnamoyl-CoA reductase OS=Capsicum annuum E-value=7e-64; Cinnamoyl CoA reductase OS=Solanum tuberosum E-value=4e-63; ] 
jgi|Phypa1_1|215362| estExt_Genewise1.C_1 140128 329  
N/A
 N/A  May belong to CCR,DFR families; Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=6e-90; Cinnamoyl-CoA reductase OS=Jatropha curcas E-value=5e-88; Putative reductase; 61412-62628 OS=Arabidopsis thaliana E-value=2e-86; Os01g0127500 protein OS=Oryza sativa subsp. japonica E-value=2e-78; Dihydroflavonol 4-reductase, putative OS=Arabidopsis thaliana E-value=3e-76; ] 
jgi|Phypa1_1|138124| e_gw1.144.123.1 356  
N/A
 N/A  May belong to CCR,DFR families; Top 5 Hits: [ At4g35420 OS=Arabidopsis thaliana E-value=4e-99; Dihydroflavonol-4-reductase OS=Zea mays E-value=7e-97; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=7e-97; Dihydro-flavanoid reductase-like protein OS=Zea mays E-value=2e-95; Dihydroflavonol-4-reductase OS=Zea mays E-value=3e-95; ] 

Lignin > Caffeic acid 3-O-methyl-transferase (COMT)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|175146| estExt_gwp_gw1.C_110 044 363  
N/A
 N/A  Top 5 Hits: [ Catechol O-methyltransferase OS=Nicotiana tabacum E-value=2e-55; Caffeic acid O-methyltransferase II OS=Nicotiana tabacum E-value=3e-54; O-methyltransferase, putative OS=Ricinus communis E-value=7e-52; Catechol o-methyltransferase OS=Populus trichocarpa E-value=1e-51; Caffeate O-methyltransferase OS=Picea abies E-value=5e-51; ] 
jgi|Phypa1_1|182345| estExt_gwp_gw1.C_560 052 378  
N/A
 N/A  Top 5 Hits: [ Catechol O-methyltransferase OS=Thalictrum tuberosum II;Thatu;1 E-value=6e-75; Catechol O-methyltransferase OS=Thalictrum tuberosum II;Thatu;4 E-value=6e-75; Putative caffeic acid methyltransferase OS=Gossypium hirsutum E-value=7e-75; Putative caffeic acid methyltransferase OS=Gossypium raimondii E-value=1e-74; Phloroglucinol O-methyltransferase OS=Rosa chinensis var. spontanea E-value=1e-74; ] 
jgi|Phypa1_1|135040| e_gw1.116.68.1 336  
N/A
 N/A  Top 5 Hits: [ Caffeic acid ortho-methyltransferase OS=Pinus radiata E-value=8e-59; Caffeic acid O-methyltransferase OS=Pinus taeda E-value=3e-58; O-methyltransferase OS=Pinus radiata E-value=2e-57; Caffeic acid 3-O-methyltransferase OS=Populus trichocarpa E-value=4e-52; Alkaloid o-methyltransferase related OS=Populus trichocarpa E-value=1e-51; ] 

Lignin > Hydroxycinnamoyl Coenzyme A: shikimate hydroxycinnamoyl transferase (HCT)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|196803| estExt_gwp_gw1.C_275 0032 436  
N/A
 N/A  Top 5 Hits: [ H1005F08.3 protein OS=Oryza sativa E-value=6e-69; Os04g0664600 protein OS=Oryza sativa subsp. japonica E-value=2e-68; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea arabica E-value=2e-68; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=3e-68; Hydroxycinnamoyl transferase OS=Coffea arabica E-value=3e-68; ] 
jgi|Phypa1_1|168049| estExt_fgenesh1_pg.C _1640063 601  
N/A
 N/A  Top 5 Hits: [ Contig An01c0350, complete genome OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) E-value=0; Pc20g13960 protein OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) E-value=4e-91; Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase OS=Pinus radiata E-value=4e-14; Putative alcohol acyltransferase 1 OS=Lavandula angustifolia E-value=3e-13; Taxane 2-alpha-O-benzoyltransferase OS=Taxus x media E-value=4e-11; ] 
jgi|Phypa1_1|196442| estExt_gwp_gw1.C_266 0021 436  
N/A
 N/A  Top 5 Hits: [ H1005F08.3 protein OS=Oryza sativa E-value=9e-73; Os04g0664600 protein OS=Oryza sativa subsp. japonica E-value=2e-72; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=3e-72; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea arabica E-value=5e-72; Hydroxycinnamoyl transferase OS=Coffea arabica E-value=6e-72; ] 
jgi|Phypa1_1|125437| e_gw1.54.60.1 470  
N/A
 N/A  Top 5 Hits: [ Shikimate O-hydroxycinnamoyltransferase OS=Trifolium pratense E-value=8e-59; Shikimate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=3e-58; Putative acyltransferase OS=Clitoria ternatea E-value=2e-57; Hydroxycinnamoyl transferase OS=Nicotiana tabacum E-value=5e-57; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase OS=Populus trichocarpa E-value=6e-57; ] 
jgi|Phypa1_1|112484| e_gw1.4.208.1 411  
N/A
 N/A  Top 5 Hits: [ Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=2e-67; Taxadien-5-alpha-ol O-acetyltransferase, putative OS=Ricinus communis E-value=3e-65; T8F5.23 protein OS=Arabidopsis thaliana E-value=6e-65; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=2e-63; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=3e-63; ] 
jgi|Phypa1_1|105011| estExt_fgenesh1_pm.C _220020 410  
N/A
 N/A  Top 5 Hits: [ Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase OS=Pinus radiata E-value=0; Shikimate O-hydroxycinnamoyltransferase OS=Trifolium pratense E-value=0; Shikimate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=0; Putative acyltransferase OS=Clitoria ternatea E-value=0; Putative acyltransferase OS=Clitoria ternatea E-value=0; ] 
jgi|Phypa1_1|176127| estExt_gwp_gw1.C_150 252 433  
N/A
 N/A  Top 5 Hits: [ Quinate O-hydroxycinnamoyltransferase/shikimate O-hydroxycinnamoyltransferase OS=Populus trichocarpa E-value=2e-63; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase OS=Populus trichocarpa E-value=2e-63; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=9e-63; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=2e-62; Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase OS=Pinus radiata E-value=2e-62; ] 
jgi|Phypa1_1|200839| estExt_gwp_gw1.C_465 0017 454  
N/A
 N/A  Top 5 Hits: [ Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyltransferase OS=Pinus radiata E-value=2e-61; Hydroxycinnamoyl-CoA:quinate hydroxycinnamoyltransferase OS=Cynara cardunculus E-value=4e-61; Putative acyltransferase OS=Clitoria ternatea E-value=4e-61; Anthranilate N-benzoyltransferase OS=Arabidopsis thaliana E-value=1e-60; Anthranilate N-benzoyltransferase OS=Arabidopsis thaliana E-value=1e-60; ] 
jgi|Phypa1_1|32608|g w1.64.82.1 402  
N/A
 N/A  Top 5 Hits: [ Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea arabica E-value=6e-70; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=7e-70; Hydroxycinnamoyl transferase OS=Coffea arabica E-value=1e-69; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=2e-69; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase OS=Populus trichocarpa E-value=3e-69; ] 
jgi|Phypa1_1|138784| e_gw1.150.83.1 459  
N/A
 N/A  Top 5 Hits: [ Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein (Fragment) OS=Populus trichocarpa E-value=0; Taxadien-5-alpha-ol O-acetyltransferase, putative OS=Ricinus communis E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=0; Putative N-hydroxycinnamoyl/benzoyltransferase OS=Arabidopsis thaliana E-value=0; ] 
jgi|Phypa1_1|116553| e_gw1.16.170.1 460  
N/A
 N/A  Top 5 Hits: [ Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=9e-66; T8F5.23 protein OS=Arabidopsis thaliana E-value=2e-64; Taxadien-5-alpha-ol O-acetyltransferase, putative OS=Ricinus communis E-value=2e-62; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein (Fragment) OS=Populus trichocarpa E-value=3e-60; Hydroxycinnamoyl transferase OS=Nicotiana tabacum E-value=2e-59; ] 
jgi|Phypa1_1|32573|g w1.97.108.1 402  
N/A
 N/A  Top 5 Hits: [ Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=6e-59; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea arabica E-value=8e-59; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=4e-58; Putative acyltransferase OS=Clitoria ternatea E-value=4e-58; Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase OS=Coffea canephora E-value=4e-58; ] 

Lignin > Laccase (Laccase)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|106598| estExt_fgenesh1_pm.C _860004 571  
N/A
 N/A  Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase OS=Pinus taeda E-value=0; Laccase 90c OS=Populus trichocarpa E-value=0; Laccase 90a OS=Populus trichocarpa E-value=0; ] 
jgi|Phypa1_1|176440| estExt_gwp_gw1.C_170 108 564  
N/A
 N/A  Top 5 Hits: [ Laccase 90c OS=Populus trichocarpa E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase 90a OS=Populus trichocarpa E-value=0; ] 


  © 2010 by The Samuel Roberts Noble Foundation, Inc.