Phenylpropanoids and plant defense -- an updated genomic perspective

The Online Data Resource for Review:

	Home Browse By Gene Family + 2Og 4CL C3H C4H CAD CCOMT CCR CHI CHR CHS COMT DFR F3'5'H F3'H F5H HCT I2'H IFR IFS IOMT Laccase PAL Browse By Species + A. thaliana G. max L. japonicus M. truncatula O. sativa P. patens P. trichocarpa S. bicolor S. moellendorffii V. vinifera Z. mays
Location: Home > Species: Medicago truncatula

Seq ID	Length	Coordinates	AffyProbes	Description
Core phenylpropanoid pathway > 4-Coumarate: Coenzyme A ligase (4CL)
IMGA\|AC233655_1.1	551	Chr. : mth2-c1244 From : 24780 To : 29515 Strand: -	Mtr.42337.1.S1_at	Top 5 Hits: [ 4-coumarate:CoA ligase OS=Amorpha fruticosa E-value=0; 4-coumarate:CoA ligase OS=Betula platyphylla E-value=0; 4-coumarate:CoA ligase isoenzyme 2 OS=Glycine max E-value=0; 4-coumarate CoA ligase 2 (Fragment) OS=Leucaena glauca E-value=0; 4-coumarate:CoA ligase OS=Humulus lupulus E-value=0; ]
IMGA\|Medtr1g087380.1	542	Chr. : chr01 From : 17596379 To : 17602444 Strand: -	N/A	Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr3g043450.1	515	Chr. : chr03 From : 11785947 To : 11793982 Strand: -	Mtr.12556.1.S1_at	Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ]
IMGA\|Medtr3g117330.1	562	Chr. : chr03 From : 29530003 To : 29534795 Strand: -	N/A	Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr3g117340.1	560	Chr. : chr03 From : 29537488 To : 29544585 Strand: -	Mtr.44778.1.S1_at; Mtr.45561.1.S1_at	Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr4g023340.1	539	Chr. : chr04 From : 4954468 To : 4958138 Strand: -	Mtr.25611.1.S1_at	Top 5 Hits: [ 4-coumarate:CoA ligase OS=Amorpha fruticosa E-value=0; 4-coumarate CoA ligase 2 (Fragment) OS=Leucaena glauca E-value=0; 4-coumarate:CoA ligase OS=Betula platyphylla E-value=0; 4-coumarate:CoA ligase OS=Humulus lupulus E-value=0; 4-coumarate:CoA ligase isoenzyme 2 OS=Glycine max E-value=0; ]
IMGA\|Medtr4g107290.1	478	Chr. : chr04 From : 23387848 To : 23390872 Strand: +	N/A	Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; ]
IMGA\|Medtr5g007720.1	587	Chr. : chr05 From : 1270333 To : 1276333 Strand: +	Mtr.41031.1.S1_at	Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; 4-coumarate:CoA ligase OS=Glycine max E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:coA ligase 3 OS=Rubus idaeus E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr5g027650.1	555	Chr. : chr05 From : 11306876 To : 11309428 Strand: -	N/A	Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ]
IMGA\|Medtr5g027670.1	568	Chr. : chr05 From : 11317383 To : 11319976 Strand: -	Mtr.42330.1.S1_at	Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description	NCBI Protein	Literature
Core phenylpropanoid pathway > Cinnamate 4-hydroxylase (C4H)
IMGA\|AC233660_7.1	537	Chr. : mth2-c161 From : 34943 To : 37165 Strand: -	N/A	Top 5 Hits: [ Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; Cinnamate 4-hydroxylase OS=Phaseolus vulgaris E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Core phenylpropanoid pathway > L-Phenylalanine ammonia-lyase (PAL)
IMGA\|fpc265_29.1	485	Chr. : fpc265 From : 133491 To : 134948 Strand: -	N/A	Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Vitis vinifera E-value=0; Phenylalanine ammonia-lyase, putative OS=Ricinus communis E-value=0; Phenylalanine ammonia-lyase OS=Camellia oleifera E-value=0; Phenylalanine ammonia-lyase OS=Daucus carota E-value=0; Phenylalanine ammonia-lyase OS=Daucus carota E-value=0; ]
IMGA\|Medtr1g076720.1	712	Chr. : chr01 From : 15390975 To : 15395552 Strand: -	N/A	Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Trifolium pratense E-value=0; Phenylalanine ammonia-lyase OS=Trifolium pratense E-value=0; Phenylalanine ammonia-lyase OS=Astragalus mongholicus E-value=0; Phenylalanine ammonia-lyase OS=Astragalus penduliflorus E-value=0; Phenylalanine ammonia-lyase OS=Glycine max E-value=0; ]
IMGA\|Medtr1g120610.1	722	Chr. : chr01 From : 25996019 To : 26002607 Strand: -	N/A	Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Ricinus communis E-value=0; Phenylalanine ammonia-lyase OS=Manihot esculenta E-value=0; Phenylalanine ammonia-lyase OS=Populus trichocarpa E-value=0; Phenylalanine ammonia-lyase OS=Populus trichocarpa E-value=0; Phenylalanine ammonia-lyase OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr5g106310.1	708	Chr. : chr05 From : 42754460 To : 42757390 Strand: +	N/A	Top 5 Hits: [ Phenylalanine ammonia-lyase OS=Ricinus communis E-value=0; Phenylalanine ammonia-lyase OS=Jatropha curcas E-value=0; Phenylalanine ammonia-lyase OS=Vitis vinifera E-value=0; Phenylalanine ammonia-lyase OS=Robinia pseudoacacia E-value=0; Phenylalanine ammonia-lyase OS=Vitis vinifera E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Flavonoid core > Chalcone isomerase (CHI)
Medtr1g146030	224	Chr. : chr01 From : 32178552 To : 32179536 Strand: -	N/A	Top 5 Hits: [ Chalcone isomerase OS=Glycine max E-value=1e-88; Chalcone isomerase OS=Populus trichocarpa E-value=1e-87; Chalcone isomerase OS=Citrus unshiu E-value=6e-86; Chalcone isomerase 1 (Fragment) OS=Glycine max E-value=3e-83; Chalcone isomerase protein OS=Malus hybrid cultivar E-value=1e-82; ]
Medtr1g146040	223	Chr. : chr01 From : 32189849 To : 32192781 Strand: -	Mtr.31570.1.S1_at	Top 5 Hits: [ Chalcone isomerase 2 (Fragment) OS=Glycine max E-value=1e-86; Chalcone isomerase A OS=Glycine max E-value=3e-71; Chalcone isomerase OS=Glycyrrhiza uralensis E-value=3e-71; Chalcone isomerase OS=Populus trichocarpa E-value=3e-61; Chalcone isomerase OS=Ipomoea purpurea E-value=3e-60; ]
Medtr1g146050	225	Chr. : chr01 From : 32194243 To : 32195931 Strand: -	N/A	Top 5 Hits: [ Chalcone isomerase 2 (Fragment) OS=Glycine max E-value=5e-89; Chalcone isomerase OS=Glycyrrhiza uralensis E-value=5e-74; Chalcone isomerase A OS=Glycine max E-value=6e-74; Chalcone isomerase OS=Populus trichocarpa E-value=2e-65; Chalcone isomerase OS=Ipomoea purpurea E-value=3e-63; ]
Medtr1g146080	222	Chr. : chr01 From : 32201168 To : 32202558 Strand: -	Mtr.8531.1.S1_at	Top 5 Hits: [ Chalcone isomerase A OS=Glycine max E-value=2e-97; Chalcone isomerase OS=Glycyrrhiza uralensis E-value=2e-97; Chalcone isomerase 2 (Fragment) OS=Glycine max E-value=8e-73; Chalcone isomerase (Fragment) OS=Cicer arietinum E-value=3e-69; Chalcone isomerase OS=Populus trichocarpa E-value=2e-63; ]
Medtr1g146220	224	Chr. : chr01 From : 32245224 To : 32247023 Strand: -	Mtr.4347.1.S1_s_at	Top 5 Hits: [ Chalcone isomerase OS=Glycine max E-value=9e-88; Chalcone isomerase OS=Populus trichocarpa E-value=3e-84; Chalcone isomerase 1 (Fragment) OS=Glycine max E-value=5e-83; Chalcone isomerase OS=Citrus unshiu E-value=2e-80; Chalcone isomerase protein OS=Malus hybrid cultivar E-value=2e-78; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Flavonoid core > Chalcone reductase (CHR)
Medtr3g106150	315	Chr. : chr03 From : 26693884 To : 26695935 Strand: +	N/A	Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; ]
Medtr4g097740	300	Chr. : chr04 From : 20969918 To : 20971968 Strand: +	N/A	Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-97; Aldo-keto reductase, putative OS=Ricinus communis E-value=5e-95; Aldo-keto reductase, putative OS=Ricinus communis E-value=9e-95; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=1e-91; ]
Medtr4g097770	331	Chr. : chr04 From : 20981453 To : 20983240 Strand: +	N/A	Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-97; Aldo-keto reductase, putative OS=Ricinus communis E-value=6e-95; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-93; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=7e-92; ]
Medtr4g097780	308	Chr. : chr04 From : 20984406 To : 20986141 Strand: +	N/A	Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Reductase 1 OS=Hydrangea macrophylla E-value=1e-86; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-86; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-85; Aldo-keto reductase, putative OS=Ricinus communis E-value=4e-84; ]
Medtr5g105610	312	Chr. : chr05 From : 42415018 To : 42416368 Strand: -	N/A	Top 5 Hits: [ Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ]
Medtr5g105620	312	Chr. : chr05 From : 42424128 To : 42425511 Strand: -	Mtr.17404.1.S1_s_at	Top 5 Hits: [ Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ]
Medtr5g105640	312	Chr. : chr05 From : 42430365 To : 42431825 Strand: +	Mtr.17404.1.S1_s_at	Top 5 Hits: [ Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description	NCBI Protein	Literature
Flavonoid core > Chalcone synthase (CHS)
Medtr1g124570	389	Chr. : chr01 From : 27171880 To : 27173521 Strand: +	N/A	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr1g124580	389	Chr. : chr01 From : 27176080 To : 27177727 Strand: +	Mtr.10368.1.S1_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase (Fragment) OS=Astragalus mongholicus E-value=0; ]
Medtr1g124600	389	Chr. : chr01 From : 27180149 To : 27186123 Strand: +	N/A	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase (Fragment) OS=Astragalus mongholicus E-value=0; ]
Medtr2g073900	389	Chr. : chr02 From : 16761473 To : 16764088 Strand: -	N/A	Top 5 Hits: [ Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr3g102800	427	Chr. : chr03 From : 25177750 To : 25179796 Strand: -	Mtr.49423.1.S1_at	Top 5 Hits: [ Root-specific chalcone synthase OS=Senna alata E-value=0; Root-specific chalcone synthase OS=Senna alata E-value=0; Root-specific chalcone synthase OS=Senna alata E-value=0; Chalcone synthase OS=Clitoria ternatea E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; ]
Medtr3g105280	389	Chr. : chr03 From : 26335756 To : 26337357 Strand: +	Mtr.14428.1.S1_at	Top 5 Hits: [ Root-specific chalcone synthase OS=Senna alata E-value=0; Root-specific chalcone synthase OS=Senna alata E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Lupinus luteus E-value=0; ]
Medtr3g105290	389	Chr. : chr03 From : 26339689 To : 26341320 Strand: +	Mtr.20567.1.S1_at	Top 5 Hits: [ Root-specific chalcone synthase OS=Senna alata E-value=0; Root-specific chalcone synthase OS=Senna alata E-value=0; Chalcone synthase OS=Clitoria ternatea E-value=0; Chalcone synthase OS=Lupinus luteus E-value=0; Root-specific chalcone synthase OS=Senna alata E-value=0; ]
Medtr4g133440	274	Chr. : chr04 From : 31978074 To : 31979153 Strand: -	N/A	Top 5 Hits: [ Root-specific chalcone synthase OS=Senna alata E-value=0; Chalcone synthase (Fragment) OS=Robinia pseudoacacia E-value=0; Chalcone synthase (Fragment) OS=Robinia pseudoacacia E-value=0; Root-specific chalcone synthase OS=Senna alata E-value=0; Chalcone synthase 9 OS=Glycine max E-value=0; ]
Medtr5g007800	389	Chr. : chr05 From : 1303649 To : 1305141 Strand: +	Mtr.20187.1.S1_at	Top 5 Hits: [ Chalcone synthase OS=Cicer arietinum E-value=0; Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr5g007810	389	Chr. : chr05 From : 1307712 To : 1309413 Strand: +	Mtr.49572.1.S1_s_at	Top 5 Hits: [ Chalcone synthase OS=Cicer arietinum E-value=0; Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr5g007840	389	Chr. : chr05 From : 1317587 To : 1319306 Strand: +	Mtr.20185.1.S1_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr5g007850	389	Chr. : chr05 From : 1322930 To : 1326255 Strand: +	Mtr.49574.1.S1_at	Top 5 Hits: [ Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr5g007860	389	Chr. : chr05 From : 1330357 To : 1332371 Strand: +	Mtr.40122.1.S1_s_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr5g007870	250	Chr. : chr05 From : 1335177 To : 1336098 Strand: +	Mtr.49576.1.S1_at	Top 5 Hits: [ Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr7g014940	389	Chr. : chr07 From : 3647736 To : 3649377 Strand: +	Mtr.20464.1.S1_x_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr7g014950	389	Chr. : chr07 From : 3651341 To : 3654352 Strand: -	Mtr.17612.1.S1_x_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]	CAC20725.1	Wasson et al.,2006
Medtr7g014960	389	Chr. : chr07 From : 3665921 To : 3667472 Strand: +	Mtr.17616.1.S1_x_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr7g014980	389	Chr. : chr07 From : 3673568 To : 3675387 Strand: +	Mtr.17621.1.S1_x_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr7g015000	389	Chr. : chr07 From : 3678382 To : 3680099 Strand: +	Mtr.45667.1.S1_x_at	Top 5 Hits: [ Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Cicer arietinum E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase OS=Glycine max E-value=0; ]
Medtr7g097310	391	Chr. : chr07 From : 22014592 To : 22016749 Strand: -	Mtr.10369.1.S1_at	Top 5 Hits: [ Chalcone synthase OS=Populus alba E-value=0; Chalcone synthase OS=Vitis vinifera E-value=0; Chalcone synthase OS=Vitis vinifera E-value=0; Chalcone synthase OS=Vitis vinifera E-value=0; Chalcone synthase OS=Dictamnus albus E-value=0; ]
Medtr7g139170	303	Chr. : chr07 From : 33223217 To : 33224293 Strand: -	Mtr.49659.1.S1_x_at	Top 5 Hits: [ Chalcone synthase OS=Cicer arietinum E-value=0; Putative chalcone synthase OS=Medicago truncatula E-value=0; Chalcone synthase OS=Glycyrrhiza uralensis E-value=0; Chalcone synthase OS=Glycyrrhiza inflata E-value=0; Chalcone synthase (Fragment) OS=Robinia pseudoacacia E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Flavonols, anthocyanidins > 2-Oxoglutarate-dependent dioxygenase (2Og)
Medtr7g093160	351	Chr. : chr07 From : 20746336 To : 20748468 Strand: +	N/A	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Putative flavonol synthase OS=Arabidopsis thaliana E-value=0; Hyoscyamine 6-dioxygenase, putative OS=Ricinus communis E-value=1e-95; SRG1-like protein OS=Arabidopsis thaliana E-value=2e-91; Fe2+ dioxygenase-like OS=Sisymbrium irio E-value=5e-90; ]
Medtr8g105350	313	Chr. : chr08 From : 23248356 To : 23254553 Strand: +	Mtr.35127.1.S1_s_at; Mtr.42370.1.S1_s_at; Mtr.45897.1.S1_at	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Transposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica E-value=2e-83; Os10g0523100 protein OS=Oryza sativa subsp. japonica E-value=3e-83; AT4G16770 protein OS=Arabidopsis thaliana E-value=9e-77; Putative gibberellin 20-oxidase OS=Oryza sativa subsp. japonica E-value=9e-75; ]
Medtr8g105360	322	Chr. : chr08 From : 23257420 To : 23260995 Strand: +	N/A	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Transposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica E-value=5e-87; Os10g0523100 protein OS=Oryza sativa subsp. japonica E-value=5e-87; AT4G16770 protein OS=Arabidopsis thaliana E-value=3e-79; Putative gibberellin 20-oxidase OS=Oryza sativa subsp. japonica E-value=2e-77; ]
Medtr8g122060	280	Chr. : chr08 From : 28457531 To : 28459767 Strand: -	N/A	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Ethylene-forming-enzyme-like dioxygenase OS=Prunus armeniaca E-value=1e-84; Similar to ethylene-forming-enzyme-like dioxygenase OS=Arabidopsis thaliana E-value=9e-81; Putative ethylene-forming dioxygenase OS=Arabidopsis thaliana E-value=2e-76; Ethylene-forming-enzyme-like dioxygenase-like protein OS=Arabidopsis thaliana E-value=2e-76; ]
AC235677_29	317	Chr. : mth2-c179 From : 131717 To : 133698 Strand: +	N/A	Top 5 Hits: [ Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=2e-93; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=4e-87; SRG1-like protein OS=Arabidopsis thaliana E-value=2e-83; SRG1-like protein OS=Arabidopsis thaliana E-value=2e-83; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=2e-82; ]
AC235677_19	359	Chr. : mth2-c179 From : 84535 To : 88047 Strand: +	N/A	Top 5 Hits: [ Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; SRG1-like protein OS=Arabidopsis thaliana E-value=0; SRG1-like protein OS=Arabidopsis thaliana E-value=0; ]
Medtr5g067720	394	Chr. : chr05 From : 24070781 To : 24072970 Strand: +	N/A	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; ]
Medtr5g067780	355	Chr. : chr05 From : 24101751 To : 24113201 Strand: +	N/A	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; SRG1-like protein OS=Arabidopsis thaliana E-value=0; ]
Medtr5g067800	350	Chr. : chr05 From : 24120789 To : 24132358 Strand: +	Mtr.13512.1.S1_at; Mtr.1563.1.S1_at	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; SRG1 like protein OS=Arabidopsis thaliana E-value=2e-96; ]
Medtr5g067820	355	Chr. : chr05 From : 24160168 To : 24162796 Strand: -	Mtr.31273.1.S1_at; Mtr.39751.1.S1_at	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; SRG1-like protein OS=Arabidopsis thaliana E-value=0; SRG1-like protein OS=Arabidopsis thaliana E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; ]
Medtr5g067830	354	Chr. : chr05 From : 24164638 To : 24168225 Strand: -	N/A	Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; ]
Medtr3g124060	261	Chr. : chr03 From : 31350226 To : 31351751 Strand: -	Mtr.17728.1.S1_at	Subfamily: ANS; putative; Top 5 Hits: [ Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=8e-62; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=1e-54; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=1e-52; Os08g0480200 protein OS=Oryza sativa subsp. japonica E-value=2e-42; Os04g0581100 protein OS=Oryza sativa subsp. japonica E-value=5e-38; ]
Medtr4g120970	366	Chr. : chr04 From : 28221584 To : 28223997 Strand: +	N/A	Subfamily: ANS; putative; Top 5 Hits: [ Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Os08g0480200 protein OS=Oryza sativa subsp. japonica E-value=3e-73; Desacetoxyvindoline 4-hydroxylase, putative OS=Ricinus communis E-value=2e-63; ]
Medtr5g011370	356	Chr. : chr05 From : 3068080 To : 3070616 Strand: +	Mtr.28774.1.S1_at; Mtr.3858.1.S1_at	Subfamily: ANS; putative; Top 5 Hits: [ Anthocyanidin synthase OS=Medicago truncatula E-value=0; Anthocyanidin synthase 2 OS=Glycine max E-value=0; Anthocyanidin synthase OS=Glycine max E-value=0; Anthocyanidin synthase OS=Malus domestica E-value=0; Anthocyanidin synthase protein OS=Malus hybrid cultivar E-value=0; ]
Medtr5g074190	342	Chr. : chr05 From : 26752322 To : 26755547 Strand: +	Mtr.38650.1.S1_at	Subfamily: ANS; putative; Top 5 Hits: [ Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis E-value=0; Leucoanthocyanidin dioxygenase, putative OS=Ricinus communis E-value=0; Os08g0480200 protein OS=Oryza sativa subsp. japonica E-value=3e-79; ]
Medtr3g122530	338	Chr. : chr03 From : 30491189 To : 30496707 Strand: -	N/A	Subfamily: F3betaH; putative; Top 5 Hits: [ 1-aminocyclopropane-1-carboxylate oxidase, putative OS=Ricinus communis E-value=0; Flavanone 3-hydroxylase-like protein OS=Arabidopsis thaliana E-value=0; Flavanone 3-hydroxylase-like protein OS=Arabidopsis thaliana E-value=0; Os03g0122300 protein OS=Oryza sativa subsp. japonica E-value=0; Oxidoreductase, 2OG-Fe oxygenase family protein, expressed OS=Oryza sativa subsp. japonica E-value=0; ]
Medtr5g021930	357	Chr. : chr05 From : 8485405 To : 8487294 Strand: +	N/A	Subfamily: F3betaH; putative; Top 5 Hits: [ Naringenin 3-dioxygenase (Flavanone-3-hydroxylase) OS=Medicago sativa E-value=0; Flavonone-3-hydroxylase OS=Medicago sativa E-value=0; Naringenin 2-oxoglutarate 3-dioxygenase OS=Clitoria ternatea E-value=0; Flavanone-3-hydroxylase OS=Gossypium hirsutum E-value=0; GA20ox1 OS=Gossypium barbadense E-value=0; ]
Medtr8g089930	365	Chr. : chr08 From : 19474753 To : 19477431 Strand: -	Mtr.49432.1.S1_at	Subfamily: F3betaH; putative; Top 5 Hits: [ Flavanone 3-hydroxylase OS=Glycine soja E-value=0; Flavanone 3-hydroxylase OS=Glycine max E-value=0; Flavanone 3-hydroxylase OS=Glycine soja E-value=0; Flavanone 3-hydroxylase OS=Glycine soja E-value=0; Naringenin 2-oxoglutarate 3-dioxygenase OS=Clitoria ternatea E-value=0; ]
Medtr8g089960	365	Chr. : chr08 From : 19497453 To : 19500530 Strand: -	N/A	Subfamily: F3betaH; putative; Top 5 Hits: [ Flavanone-3-hydroxylase OS=Gossypium hirsutum E-value=0; GA20ox1 OS=Gossypium barbadense E-value=0; Flavanone-3-hydroxylase OS=Dimocarpus longan E-value=0; Naringenin 2-oxoglutarate 3-dioxygenase OS=Clitoria ternatea E-value=0; Gibberellin 20-oxidase 1 OS=Gossypium hirsutum E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Flavonols, anthocyanidins > Dihydroflavonol reductase (DFR)
AC235668_6	247	Chr. : mth2-58d20 From : 19155 To : 23405 Strand: +	N/A	Top 5 Hits: [ Dihydroflavanol-4-reductase 1 OS=Medicago truncatula E-value=0; Dihydroflavonol reductase OS=Lotus corniculatus E-value=0; Dihydroflavonol 4-reductase OS=Lotus japonicus E-value=0; Dihydroflavanol reductase 3 OS=Lotus corniculatus E-value=0; Dihydroflavonol-4-reductase DFR1 OS=Glycine max E-value=0; ]
Medtr2g122390	330	Chr. : chr02 From : 29360514 To : 29361822 Strand: -	N/A	May belong to CCR,DFR families; Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; At4g35420 OS=Arabidopsis thaliana E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=0; Dihydro-flavanoid reductase-like protein OS=Zea mays E-value=0; ]
Medtr3g147990	333	Chr. : chr03 From : 38465792 To : 38468225 Strand: -	Mtr.9379.1.S1_at	Top 5 Hits: [ Dihydroflavonal-4-reductase, putative OS=Ricinus communis E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=0; Uncharacterized protein At4g33360.2 OS=Arabidopsis thaliana E-value=0; Putative dihydroflavonal-4-reductase OS=Oryza sativa E-value=0; Os03g0184550 protein OS=Oryza sativa subsp. japonica E-value=2e-98; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Flavonols, anthocyanidins > Flavonoid 3',5'-hydroxylase (F3'5'H)
Medtr3g169570	515	Chr. : chr03 From : 44249975 To : 44253390 Strand: +	N/A	Top 5 Hits: [ Flavonoid 3'5' hydroxylase OS=Glycine max E-value=0; Flavonoid 3', 5'-hydroxylase OS=Glycine max E-value=0; Flavonoid 3',5'-hydroxylase OS=Clitoria ternatea E-value=0; Flavonoid 3',5'-hdyroxylase (Fragment) OS=Clitoria ternatea E-value=0; Flavonoid 3',5'-hydroxylase OS=Cyclamen persicum E-value=0; ]
Medtr3g169650_60	506	N/A	N/A	Top 5 Hits: [ Flavonoid 3',5'-hydroxylase OS=Gossypium hirsutum E-value=0; Flavonoid 3'5'-hydroxylase OS=Gossypium hirsutum E-value=0; Flavonoid 3',5'-hydroxylase OS=Populus trichocarpa E-value=0; Cytochrome P450 flavonoid 3',5'-hydroxylase OS=Populus trichocarpa E-value=0; Flavonoid-3',5'-hydroxylase OS=Petunia hybrida E-value=3e-99; ]

Seq ID	Length	Coordinates	AffyProbes	Description	NCBI Protein	Literature
Flavonols, anthocyanidins > Flavonoid 3'-hydroxylase (F3'H)
Medtr3g037120	516	Chr. : chr03 From : 9970366 To : 9975286 Strand: -	Mtr.13960.1.S1_at	Top 5 Hits: [ Flavonoid 3'-hydroxylase OS=Glycine max E-value=0; Flavonoid 3'-hydroxylase OS=Glycine max E-value=0; Putative flavonoid 3'-hydroxylase OS=Trifolium pratense E-value=0; Flavonoid 3'-hydroxylase OS=Populus trichocarpa E-value=0; Flavonoid 3' hydroxylase IIa OS=Malus domestica E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description	NCBI Protein	Literature
Isoflavonoid > Isoflavone 2'-hydroxylase (I2'H)
AC235671_21	494	Chr. : mth2-75g11 From : 82360 To : 84994 Strand: -	N/A	Top 5 Hits: [ Cytochrome P450 OS=Glycyrrhiza echinata Ge-31 E-value=0; Cytochrome P450 OS=Cicer arietinum E-value=0; Isoflavone 2'-hydroxylase OS=Medicago truncatula E-value=0; Cytochrome P450 monooxygenase OS=Cicer arietinum E-value=0; CYP81E8 OS=Medicago truncatula E-value=0; ]
gi\|33521517	498	N/A	Mtr.43009.1.S1_at		AAQ20040.1	Liu et al., 2003
gi\|33521521	499	N/A	Mtr.8605.1.S1_at
gi\|33521519	501	N/A	Mtr.12632.1.S1_at	This enzyme also has I3'H activity;

Seq ID	Length	Coordinates	AffyProbes	Description
Isoflavonoid > Isoflavone reductase (IFR)
Medtr3g009310	317	Chr. : chr03 From : 1320960 To : 1323812 Strand: +	Mtr.27878.1.S1_at	Top 5 Hits: [ Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Isoflavone reductase-like protein 2 OS=Vitis vinifera E-value=0; Isoflavone reductase-like protein OS=Citrus paradisi E-value=0; Eugenol synthase 1 OS=Clarkia breweri E-value=0; ]
Medtr3g009470	317	Chr. : chr03 From : 1379423 To : 1385376 Strand: -	Mtr.32271.1.S1_at	Top 5 Hits: [ Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Isoflavone reductase-like protein OS=Citrus paradisi E-value=0; Isoflavone reductase-like protein 2 OS=Vitis vinifera E-value=0; Eugenol synthase 1 OS=Clarkia breweri E-value=0; ]
Medtr3g009510	311	Chr. : chr03 From : 1395195 To : 1398157 Strand: -	N/A	Top 5 Hits: [ Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Isoflavone reductase-like protein OS=Citrus paradisi E-value=0; Isoflavone reductase-like protein 2 OS=Vitis vinifera E-value=0; Eugenol synthase 1 OS=Clarkia breweri E-value=2e-99; ]
Medtr3g162390	312	Chr. : chr03 From : 42401546 To : 42403345 Strand: +	Mtr.12708.1.S1_at	Top 5 Hits: [ Isoflavone reductase homolog 2 OS=Glycine max E-value=0; Isoflavone reductase related protein OS=Pyrus communis E-value=0; Phenylcoumaran benzylic ether reductase 3 OS=Populus trichocarpa E-value=0; Isoflavone reductase-like protein 6 OS=Vitis vinifera E-value=0; Isoflavone reductase-like protein 5 OS=Vitis vinifera E-value=0; ]
Medtr4g095900	330	Chr. : chr04 From : 20062910 To : 20066384 Strand: +	Mtr.24228.1.S1_at	Top 5 Hits: [ Pterocarpan reductase OS=Lotus japonicus E-value=0; Pterocarpan reductase OS=Lotus japonicus E-value=0; Isoflavone reductase related protein OS=Pyrus communis E-value=0; Isoflavone reductase homolog 2 OS=Glycine max E-value=0; Isoflavone reductase-like protein 6 OS=Vitis vinifera E-value=0; ]
Medtr4g095920	309	Chr. : chr04 From : 20068108 To : 20070665 Strand: -	Mtr.24230.1.S1_at	Top 5 Hits: [ Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Isoflavone reductase, putative OS=Ricinus communis E-value=0; Isoflavone reductase-like protein OS=Arabidopsis thaliana E-value=0; Isoflavone reductase OS=Zea mays E-value=1e-98; Os02g0705000 protein OS=Oryza sativa subsp. japonica E-value=7e-92; ]
Medtr4g095930	327	Chr. : chr04 From : 20074308 To : 20076563 Strand: +	Mtr.24231.1.S1_at	Top 5 Hits: [ Pterocarpan reductase OS=Lotus japonicus E-value=0; Pterocarpan reductase OS=Lotus japonicus E-value=0; Isoflavone reductase related protein OS=Pyrus communis E-value=0; Isoflavone reductase homolog 2 OS=Glycine max E-value=0; Isoflavone reductase-like protein 6 OS=Vitis vinifera E-value=0; ]
Medtr5g020630	309	Chr. : chr05 From : 7803819 To : 7805695 Strand: +	Mtr.8604.1.S1_at	Top 5 Hits: [ Isoflavone reductase homolog 1 OS=Glycine max E-value=0; Isoflavone reductase-like protein 5 OS=Vitis vinifera E-value=0; Isoflavone reductase-like protein 6 OS=Vitis vinifera E-value=0; Phenylcoumaran benzylic ether reductase homolog Fi1 OS=Forsythia intermedia E-value=0; Isoflavone reductase, putative OS=Ricinus communis E-value=0; ]
Medtr5g020650	318	Chr. : chr05 From : 7815124 To : 7816829 Strand: +	Mtr.410.1.S1_s_at	Top 5 Hits: [ Isoflavone reductase OS=Medicago truncatula E-value=0; Isoflavone reductase homolog OS=Lotus japonicus E-value=0; NADPH:isoflavone reductase OS=Glycine max E-value=0; Isoflavone reductase homolog 1 OS=Glycine max E-value=0; Isoflavone reductase-like protein 6 OS=Vitis vinifera E-value=0; ]
Medtr5g020700	318	Chr. : chr05 From : 7827953 To : 7829818 Strand: +	Mtr.410.1.S1_s_at	Top 5 Hits: [ Isoflavone reductase OS=Medicago truncatula E-value=0; Isoflavone reductase homolog OS=Lotus japonicus E-value=0; NADPH:isoflavone reductase OS=Glycine max E-value=0; Isoflavone reductase homolog 1 OS=Glycine max E-value=0; Isoflavone reductase-like protein 6 OS=Vitis vinifera E-value=0; ]
Medtr5g027470	311	Chr. : chr05 From : 11174581 To : 11177936 Strand: -	Mtr.41269.1.S1_at	Top 5 Hits: [ Pinoresinol-lariciresinol reductase homolog OS=Lotus japonicus E-value=0; NAD dependent epimerase/dehydratase, putative OS=Ricinus communis E-value=0; Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Isoflavone reductase-like protein 1 OS=Vitis vinifera E-value=0; Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; ]
Medtr5g027490	311	Chr. : chr05 From : 11207085 To : 11213591 Strand: -	Msa.1636.1.S1_at	Top 5 Hits: [ Pinoresinol-lariciresinol reductase homolog OS=Lotus japonicus E-value=0; NAD dependent epimerase/dehydratase, putative OS=Ricinus communis E-value=0; Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; Isoflavone reductase-like protein 1 OS=Vitis vinifera E-value=0; Phenylcoumaran benzylic ether reductase-like protein OS=Populus trichocarpa E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description	NCBI Protein	Literature
Isoflavonoid > Isoflavone synthase (IFS)
gi\|27542825	523	N/A	Mtr.10492.1.S1_at
gi\|62870099	522	N/A	Mtr.30765.1.S1_at	IFS1 ;	AAY18206.1	Deavours and Dixon,2005
Medtr3g021620	514	N/A	N/A	putative;
Medtr7g111280	513	Chr. : chr07 From : 26106203 To : 26109278 Strand: +	N/A	putative;
Medtr7g111290	511	Chr. : chr07 From : 26112030 To : 26114113 Strand: +	Mtr.14172.1.S1_at	putative;

Seq ID	Length	Coordinates	AffyProbes	Description	NCBI Protein	Literature
Isoflavonoid > Isoflavone O-methyltransferase (IOMT)
IMGA\|Medtr4g125710.1	239	Chr. : chr04 From : 29702883 To : 29704694 Strand: -	N/A	Top 5 Hits: [ SAM dependent isoflavone 7-O-methyltransferase OS=Medicago truncatula E-value=0; O-methytransferase OS=Medicago sativa E-value=0; IOMT 3 OS=Medicago truncatula E-value=3e-90; S-adenosyl-L-methionine: daidzein 7-0-methyltransferase OS=Glycyrrhiza echinata E-value=2e-89; IOMT 2 OS=Medicago truncatula E-value=2e-86; ]
IMGA\|Medtr7g025780.1	350	Chr. : chr07 From : 6419832 To : 6421008 Strand: -	Mtr.51533.1.S1_at	Top 5 Hits: [ S-adenosyl-L-methionine: daidzein 7-0-methyltransferase OS=Glycyrrhiza echinata E-value=0; SAM dependent isoflavone 7-O-methyltransferase OS=Medicago truncatula E-value=0; IOMT 2 OS=Medicago truncatula E-value=0; IOMT 4 OS=Medicago truncatula E-value=0; IOMT 3 OS=Medicago truncatula E-value=0; ]
IMGA\|Medtr7g035010.1	268	Chr. : chr07 From : 8491604 To : 8492410 Strand: +	Mtr.29301.1.S1_at	Top 5 Hits: [ IOMT 4 OS=Medicago truncatula E-value=0; IOMT 2 OS=Medicago truncatula E-value=8e-73; IOMT 3 OS=Medicago truncatula E-value=1e-71; S-adenosyl-L-methionine: daidzein 7-0-methyltransferase OS=Glycyrrhiza echinata E-value=2e-71; SAM dependent isoflavone 7-O-methyltransferase OS=Medicago truncatula E-value=3e-70; ]
IMGA\|Medtr7g035040.1	361	Chr. : chr07 From : 8504168 To : 8506009 Strand: +	N/A	Subfamily: 7IOMT; Top 5 Hits: [ IOMT 4 OS=Medicago truncatula E-value=0; S-adenosyl-L-methionine: daidzein 7-0-methyltransferase OS=Glycyrrhiza echinata E-value=0; SAM dependent isoflavone 7-O-methyltransferase OS=Medicago truncatula E-value=0; IOMT 3 OS=Medicago truncatula E-value=0; IOMT 2 OS=Medicago truncatula E-value=0; ]	ABD83944.1	Deavours et al.,2006
IMGA\|Medtr7g073440.1	357	Chr. : chr07 From : 14892652 To : 14894726 Strand: +	Mtr.37751.1.S1_at	Subfamily: 7IOMT; Top 5 Hits: [ IOMT 3 OS=Medicago truncatula E-value=0; IOMT 2 OS=Medicago truncatula E-value=0; SAM dependent isoflavone 7-O-methyltransferase OS=Medicago truncatula E-value=0; O-methytransferase OS=Medicago sativa E-value=0; S-adenosyl-L-methionine: daidzein 7-0-methyltransferase OS=Glycyrrhiza echinata E-value=0; ]	ABD83943.1	Deavours et al.,2006
IMGA\|Medtr7g073460.1	546	Chr. : chr07 From : 14902303 To : 14905858 Strand: -	Mtr.19782.1.S1_at; Mtr.19783.1.S1_at	Subfamily: 7IOMT; Top 5 Hits: [ IOMT 2 OS=Medicago truncatula E-value=0; IOMT 3 OS=Medicago truncatula E-value=0; SAM dependent isoflavone 7-O-methyltransferase OS=Medicago truncatula E-value=0; O-methytransferase OS=Medicago sativa E-value=0; S-adenosyl-L-methionine: daidzein 7-0-methyltransferase OS=Glycyrrhiza echinata E-value=0; ]	ABD83942.1	Deavours et al.,2006
IMGA\|Medtr7g073480.1	352	Chr. : chr07 From : 14909528 To : 14911285 Strand: -	Mtr.49862.1.S1_at	Subfamily: 7IOMT; Top 5 Hits: [ SAM dependent isoflavone 7-O-methyltransferase OS=Medicago truncatula E-value=0; O-methytransferase OS=Medicago sativa E-value=0; IOMT 3 OS=Medicago truncatula E-value=0; S-adenosyl-L-methionine: daidzein 7-0-methyltransferase OS=Glycyrrhiza echinata E-value=0; IOMT 2 OS=Medicago truncatula E-value=0; ]	AAY18582.1	Deavours et al.,2006
gi\|62871343	364	N/A	N/A	Subfamily: 4'IOMT;	AAY18581.1	Deavours et al.,2006
gi\|90018277	357	N/A	N/A	Subfamily: 4'IOMT;	ABD83945.1	Deavours et al.,2006
gi\|90018279	363	N/A	N/A	Subfamily: 4'IOMT;	ABD83946.1	Deavours et al.,2006
gi\|90018281	366	N/A	N/A	Subfamily: 4'IOMT;	ABD83947.1	Deavours et al.,2006

Seq ID	Length	Coordinates	AffyProbes	Description	NCBI Protein	Literature
Lignin > 4-Coumaroyl shikimate 3-hydroxylase (C3H)
gi\|84514155	509	N/A	N/A	Top 5 Hits: [ cytochrome P450 monooxygenase CYP98A37 ]	TC143168	Reddy et al., 2005
gi\|84514145	512	N/A	N/A	Top 5 Hits: [ cytochrome P450 monooxygenase CYP92A29 ]

Seq ID	Length	Coordinates	AffyProbes	Description
Lignin > Cinnamyl alcohol dehydrogenase (CAD)
IMGA\|Medtr1g031870.1	360	Chr. : chr01 From : 7813847 To : 7816006 Strand: +	Mtr.46050.1.S1_at	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Camellia sinensis E-value=0; H0209A05.10 protein OS=Oryza sativa E-value=0; Mannitol dehydrogenase OS=Zea mays E-value=0; ]
IMGA\|Medtr2g009920.1	406	Chr. : chr02 From : 2273887 To : 2277061 Strand: -	Mtr.14696.1.S1_s_at; Mtr.14697.1.S1_at	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Elaeis guineensis var. tenera E-value=0; Mannitol dehydrogenase OS=Zea mays E-value=0; Mannitol dehydrogenase OS=Zea mays E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr2g009950.1	256	Chr. : chr02 From : 2280630 To : 2282133 Strand: -	Mtr.14696.1.S1_s_at	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=1e-92; Cinnamyl alcohol dehydrogenase OS=Elaeis guineensis var. tenera E-value=1e-92; Mannitol dehydrogenase OS=Zea mays E-value=2e-88; Mannitol dehydrogenase OS=Zea mays E-value=3e-83; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=2e-75; ]
IMGA\|Medtr3g012700.1	326	Chr. : chr03 From : 2176346 To : 2179785 Strand: +	Mtr.49106.1.S1_at; Mtr.49106.1.S1_s_at	May belong to CCR,CAD families; Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Eucalyptus gunnii E-value=0; ]
IMGA\|Medtr3g012710.1	322	Chr. : chr03 From : 2195833 To : 2198604 Strand: +	N/A	May belong to CCR,CAD families; Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Eucalyptus gunnii E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr4g104600.1	502	Chr. : chr04 From : 22905444 To : 22908281 Strand: +	N/A	Top 5 Hits: [ Cinnamyl alcohol dehydrogenase, putative; 82967-79323 OS=Arabidopsis thaliana E-value=3e-62; Os03g0216900 protein OS=Oryza sativa subsp. japonica E-value=9e-11; ]
IMGA\|Medtr4g104630.1	325	Chr. : chr04 From : 22912516 To : 22914644 Strand: -	N/A	May belong to CCR,CAD families; Top 5 Hits: [ Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr4g104640.1	327	Chr. : chr04 From : 22918967 To : 22920832 Strand: -	N/A	May belong to CAD,CCR families; Top 5 Hits: [ Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr4g141720.1	416	Chr. : chr04 From : 35059914 To : 35065520 Strand: -	Mtr.24074.1.S1_at; Mtr.24075.1.S1_at	Top 5 Hits: [ Cinnamyl-alcohol dehydrogenase OS=Medicago sativa E-value=0; Cinnamyl alcohol dehydrogenase OS=Gossypium hirsutum E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Putative sinapyl alcohol dehydrogenase OS=Populus tremula x Populus tremuloides E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g032630.1	335	Chr. : chr05 From : 13246380 To : 13247752 Strand: -	N/A	Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr5g032650.1	361	Chr. : chr05 From : 13252217 To : 13254184 Strand: -	N/A	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr5g032660.1	390	Chr. : chr05 From : 13258313 To : 13260263 Strand: +	N/A	Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Nicotiana tabacum E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g032680.1	361	Chr. : chr05 From : 13262461 To : 13264163 Strand: +	N/A	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g032690.1	361	Chr. : chr05 From : 13266838 To : 13268891 Strand: +	N/A	Top 5 Hits: [ Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr5g032750.1	362	Chr. : chr05 From : 13286135 To : 13288887 Strand: -	N/A	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; ]
IMGA\|Medtr5g032760.1	362	Chr. : chr05 From : 13292594 To : 13294381 Strand: -	Mtr.37341.1.S1_at	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; ]
IMGA\|Medtr5g032770.1	362	Chr. : chr05 From : 13299402 To : 13301379 Strand: -	N/A	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; ]
IMGA\|Medtr5g032800.1	363	Chr. : chr05 From : 13320025 To : 13322291 Strand: -	N/A	Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g032820.1	361	Chr. : chr05 From : 13327098 To : 13329140 Strand: -	Mtr.2534.1.S1_at	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; ]
IMGA\|Medtr5g032850.1	358	Chr. : chr05 From : 13338097 To : 13340797 Strand: +	N/A	Top 5 Hits: [ Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Sinapyl alcohol dehydrogenase-like protein OS=Populus tremula x Populus tremuloides E-value=0; ]
IMGA\|Medtr8g074350.1	323	Chr. : chr08 From : 14762954 To : 14768563 Strand: -	Mtr.6181.1.S1_at	May belong to CCR,CAD families; Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; ]
IMGA\|Medtr8g074740.1	333	Chr. : chr08 From : 14931098 To : 14934812 Strand: -	Mtr.38066.1.S1_at	May belong to CCR,CAD families; Top 5 Hits: [ Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr8g079190.1	302	Chr. : chr08 From : 16428585 To : 16431130 Strand: +	N/A	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase OS=Cucumis sativus E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr8g121370.1	361	Chr. : chr08 From : 28100046 To : 28102320 Strand: -	N/A	Top 5 Hits: [ Alcohol dehydrogenase, putative OS=Ricinus communis E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Fragaria ananassa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase-like protein OS=Populus trichocarpa E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Lignin > Caffeoyl Coenzyme A 3-O-methyl-transferase (CCOMT)
IMGA\|Medtr4g130200.1	247	Chr. : chr04 From : 31186418 To : 31188075 Strand: +	Msa.1622.1.S1_at; Mtr.16956.1.S1_at	Top 5 Hits: [ Caffeoyl coenzyme A 3-O-methyltransferase 1 OS=Leucaena glauca E-value=0; Caffeoyl coenzyme A 3-O-methyltransferase 2 OS=Leucaena glauca E-value=0; Caffeoyl-CoA O-methyltransferase OS=Betula luminifera E-value=0; Caffeoyl CoA 3-O-methyltransferase OS=Betula platyphylla E-value=0; Caffeoyl-CoA-O-methyltransferase OS=Broussonetia papyrifera E-value=0; ]
IMGA\|Medtr4g160600.1	235	Chr. : chr04 From : 40736808 To : 40738391 Strand: -	N/A	Top 5 Hits: [ O-methyltransferase, putative OS=Ricinus communis E-value=3e-79; O-methyltransferase, putative OS=Ricinus communis E-value=9e-79; O-methyltransferase OS=Mesembryanthemum crystallinum E-value=8e-73; Putative caffeoyl-CoA O-methyltransferase protein OS=Isatis tinctoria E-value=2e-68; Caffeoyl-CoA 3-O-methyltransferase OS=Brassica rapa subsp. pekinensis E-value=2e-68; ]
IMGA\|Medtr6g093410.1	238	Chr. : chr06 From : 20023036 To : 20025559 Strand: +	Mtr.40504.1.S1_at	Top 5 Hits: [ O-methyltransferase, putative OS=Ricinus communis E-value=1e-78; O-methyltransferase, putative OS=Ricinus communis E-value=2e-76; O-methyltransferase OS=Mesembryanthemum crystallinum E-value=1e-71; Caffeoyl-CoA O-methyltransferase OS=Ammi majus E-value=3e-67; Putative caffeoyl-CoA 3-O-methyltransferase OS=Capsicum annuum E-value=4e-67; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Lignin > Cinnamoyl Coenzyme A reductase (CCR)
IMGA\|CU179634_4.1	343	Chr. : S.lycopersicum From : 9139 To : 12713 Strand: -	N/A	Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Cinnamoyl CoA reductase 2 (Fragment) OS=Solanum tuberosum E-value=1e-99; Putative cinnamoyl-CoA reductase OS=Arabidopsis thaliana E-value=8e-94; Putative cinnamoyl-CoA reductase OS=Arabidopsis thaliana E-value=3e-91; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=1e-87; ]
IMGA\|Medtr2g034190.1	333	Chr. : chr02 From : 9501661 To : 9505456 Strand: -	Mtr.52265.1.S1_at	May belong to CCR,DFR families; Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Putative cinnamoyl-CoA reductase OS=Arabidopsis thaliana E-value=0; Dihydroflavonol 4-reductase-like OS=Arabidopsis thaliana E-value=5e-90; Cinnamoyl-CoA reductase OS=Camellia oleifera E-value=2e-89; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=1e-88; ]
IMGA\|Medtr2g122390.1	330	Chr. : chr02 From : 29360514 To : 29361822 Strand: -	N/A	May belong to CCR,DFR families; Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; At4g35420 OS=Arabidopsis thaliana E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=0; Dihydro-flavanoid reductase-like protein OS=Zea mays E-value=0; ]
IMGA\|Medtr3g012700.1	326	Chr. : chr03 From : 2176346 To : 2179785 Strand: +	Mtr.49106.1.S1_at; Mtr.49106.1.S1_s_at	May belong to CCR,CAD families; Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Eucalyptus gunnii E-value=0; ]
IMGA\|Medtr3g012710.1	322	Chr. : chr03 From : 2195833 To : 2198604 Strand: +	N/A	May belong to CCR,CAD families; Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamyl alcohol dehydrogenase OS=Eucalyptus gunnii E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr3g034220.1	319	Chr. : chr03 From : 9385075 To : 9389701 Strand: -	Msa.2715.1.S1_at; Mtr.12393.1.S1_at	May belong to DFR,CCR families; Top 5 Hits: [ Dihydroflavonol reductase OS=Glycine max E-value=0; Cinnamoyl-CoA reductase OS=Acacia auriculiformis x Acacia mangium E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Cinnamoyl-CoA reductase OS=Camellia oleifera E-value=0; Dihydroflavonol 4-reductase-like OS=Arabidopsis thaliana E-value=0; ]
IMGA\|Medtr4g006000.1	326	Chr. : chr04 From : 584725 To : 588302 Strand: -	Mtr.37666.1.S1_at	Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=2e-98; Putative cinnamoyl-CoA reductase OS=Arabidopsis thaliana E-value=6e-96; Putative cinnamoyl-CoA reductase OS=Arabidopsis thaliana E-value=1e-91; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=1e-89; ]
IMGA\|Medtr4g006650.1	330	Chr. : chr04 From : 930317 To : 934171 Strand: -	N/A	Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Putative cinnamoyl-CoA reductase OS=Arabidopsis thaliana E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Putative cinnamoyl-CoA reductase OS=Arabidopsis thaliana E-value=0; Os06g0623300 protein OS=Oryza sativa subsp. japonica E-value=8e-98; ]
IMGA\|Medtr4g022160.1	336	Chr. : chr04 From : 4432502 To : 4436503 Strand: -	N/A	Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Cinnamoyl CoA reductase OS=Populus trichocarpa E-value=0; Cinnamoyl-CoA reductase OS=Populus tomentosa E-value=0; Cinnamoyl-CoA reductase OS=Populus trichocarpa E-value=0; Cinnamoyl CoA reductase OS=Populus tomentosa E-value=0; ]
IMGA\|Medtr4g024930.1	329	Chr. : chr04 From : 5806603 To : 5809756 Strand: -	Mtr.24112.1.S1_at	Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=3e-93; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=6e-91; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=2e-82; NAD-dependent epimerase/dehydratase OS=Medicago truncatula E-value=3e-80; Vestitone reductase OS=Glycine max E-value=8e-79; ]
IMGA\|Medtr4g104630.1	325	Chr. : chr04 From : 22912516 To : 22914644 Strand: -	N/A	May belong to CCR,CAD families; Top 5 Hits: [ Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr4g104640.1	327	Chr. : chr04 From : 22918967 To : 22920832 Strand: -	N/A	May belong to CAD,CCR families; Top 5 Hits: [ Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g029870.1	298	Chr. : chr05 From : 12474349 To : 12477608 Strand: +	N/A	May belong to DFR,CCR families; Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Dihydroflavonol-4-reductase OS=Zea mays E-value=7e-81; Os10g0576900 protein OS=Oryza sativa subsp. japonica E-value=8e-80; Putative cinnamoyl-CoA reductase OS=Oryza sativa E-value=2e-78; Dihydroflavonol-4-reductase OS=Zea mays E-value=6e-78; ]
IMGA\|Medtr5g067120.1	319	Chr. : chr05 From : 23783086 To : 23786110 Strand: +	Mtr.9050.1.S1_at	May belong to CCR,DFR families; Top 5 Hits: [ Cinnamoyl-CoA reductase OS=Jatropha curcas E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Putative reductase; 61412-62628 OS=Arabidopsis thaliana E-value=0; Dihydroflavonol 4-reductase, putative OS=Arabidopsis thaliana E-value=0; Os01g0127500 protein OS=Oryza sativa subsp. japonica E-value=0; ]
IMGA\|Medtr5g080900.1	320	Chr. : chr05 From : 30324817 To : 30328194 Strand: +	Mtr.35998.1.S1_at	May belong to DFR,CCR families; Top 5 Hits: [ Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Cinnamoyl-CoA reductase OS=Camellia oleifera E-value=0; Dihydroflavonol 4-reductase-like OS=Arabidopsis thaliana E-value=0; NmrA-like family protein OS=Solanum demissum E-value=0; Putative cinnamoyl-CoA reductase-like protein OS=Solanum tuberosum E-value=0; ]
IMGA\|Medtr8g074350.1	323	Chr. : chr08 From : 14762954 To : 14768563 Strand: -	Mtr.6181.1.S1_at	May belong to CCR,CAD families; Top 5 Hits: [ Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl-CoA reductase, putative OS=Ricinus communis E-value=0; Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; ]
IMGA\|Medtr8g074740.1	333	Chr. : chr08 From : 14931098 To : 14934812 Strand: -	Mtr.38066.1.S1_at	May belong to CCR,CAD families; Top 5 Hits: [ Putative cinnamyl alcohol dehydrogenase OS=Malus domestica E-value=0; Cinnamyl alcohol dehydrogenase OS=Prunus mume E-value=0; Phenylacetaldehyde reductase OS=Rosa damascena E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; Cinnamoyl CoA reductase-like protein OS=Populus trichocarpa E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Lignin > Caffeic acid 3-O-methyl-transferase (COMT)
IMGA\|Medtr3g022200.1	357	Chr. : chr03 From : 5693162 To : 5697061 Strand: -	Mtr.10220.1.S1_s_at; Mtr.18067.1.S1_at	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=0; Caffeic acid O-methyltransferase OS=Malus domestica E-value=2e-81; Caffeic acid O-methyltransferase OS=Malus domestica E-value=2e-81; Caffeic acid O-methyltransferase II OS=Nicotiana tabacum E-value=4e-81; Caffeic acid O-methyltransferase OS=Malus domestica E-value=7e-81; ]
IMGA\|Medtr3g022210.1	370	Chr. : chr03 From : 5697570 To : 5701683 Strand: -	N/A	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=0; Caffeic acid O-methyltransferase OS=Malus domestica E-value=2e-82; Caffeic acid O-methyltransferase OS=Malus domestica E-value=8e-82; Caffeic acid O-methyltransferase OS=Jatropha curcas E-value=3e-81; Caffeic acid O-methyltransferase OS=Malus domestica E-value=1e-80; ]
IMGA\|Medtr3g105610.1	361	Chr. : chr03 From : 26457000 To : 26459910 Strand: +	Mtr.45963.1.S1_at; Mtr.5380.1.S1_s_at	Top 5 Hits: [ O-methyltransferase, putative OS=Ricinus communis E-value=3e-98; O-methyltransferase, putative OS=Ricinus communis E-value=4e-94; O-methyltransferase-like protein OS=Arabidopsis thaliana E-value=2e-84; O-methyltransferase-like protein OS=Arabidopsis thaliana E-value=2e-72; Caffeic acid 3-O-methyltransferase OS=Populus trichocarpa E-value=1e-64; ]
IMGA\|Medtr3g122520.1	365	Chr. : chr03 From : 30482804 To : 30490935 Strand: +	Mtr.14783.1.S1_at	Top 5 Hits: [ Caffeic acid O-methyltransferase OS=Acacia auriculiformis x Acacia mangium E-value=0; Caffeic acid O-methyl transferase OS=Leucaena glauca E-value=0; O-methyltransferase, putative OS=Ricinus communis E-value=0; Caffeic acid O-methyltransferase OS=Rosa chinensis var. spontanea E-value=0; O-methyltransferase OS=Fragaria ananassa E-value=0; ]
IMGA\|Medtr3g143540.1	358	Chr. : chr03 From : 37050969 To : 37055935 Strand: +	N/A	Top 5 Hits: [ O-diphenol-O-methyl transferase OS=Medicago varia E-value=0; Beta-alanine n-methyltransferase related OS=Populus trichocarpa E-value=0; O-methyltransferase, putative OS=Ricinus communis E-value=0; Caffeic acid O-methyltransferase-like protein OS=Arabidopsis thaliana E-value=0; S-adenosyl-L-methionine: beta-alanine N-methyltransferase OS=Limonium latifolium E-value=0; ]
IMGA\|Medtr3g143560.1	358	Chr. : chr03 From : 37062625 To : 37066690 Strand: +	Mtr.43098.1.S1_at; Mtr.5939.1.S1_s_at; Mtr.7717.1.S1_at	Top 5 Hits: [ O-diphenol-O-methyl transferase OS=Medicago varia E-value=0; Beta-alanine n-methyltransferase related OS=Populus trichocarpa E-value=0; Caffeic acid O-methyltransferase-like protein OS=Arabidopsis thaliana E-value=0; O-methyltransferase, putative OS=Ricinus communis E-value=0; S-adenosyl-L-methionine: beta-alanine N-methyltransferase OS=Limonium latifolium E-value=0; ]
IMGA\|Medtr4g047310.1	369	Chr. : chr04 From : 10965784 To : 10971911 Strand: +	N/A	Top 5 Hits: [ O-methyltransferase, putative OS=Ricinus communis E-value=0; O-methyltransferase, putative OS=Ricinus communis E-value=0; Caffeic acid 3-O-methyltransferase OS=Populus trichocarpa E-value=0; Alkaloid o-methyltransferase related OS=Populus trichocarpa E-value=0; Caffeic acid O-methyltransferase OS=Rosa chinensis var. spontanea E-value=0; ]
IMGA\|Medtr5g105850.1	361	Chr. : chr05 From : 42539806 To : 42543553 Strand: +	N/A	Top 5 Hits: [ O-methyltransferase, putative OS=Ricinus communis E-value=0; Caffeic acid 3-O-methyltransferase OS=Populus trichocarpa E-value=0; O-methyltransferase OS=Populus trichocarpa x Populus deltoides E-value=0; Caffeic acid O-3-methyltransferase OS=Populus deltoides E-value=0; Caffeic acid O-methyltransferase OS=Acacia auriculiformis x Acacia mangium E-value=0; ]
IMGA\|Medtr7g011150.1	370	Chr. : chr07 From : 2624646 To : 2626966 Strand: -	N/A	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=0; Caffeic acid O-methyltransferase OS=Malus domestica E-value=1e-88; Caffeic acid O-methyltransferase OS=Malus domestica E-value=1e-88; Caffeic acid O-methyltransferase OS=Jatropha curcas E-value=6e-88; O-methyltransferase, putative OS=Ricinus communis E-value=7e-88; ]
IMGA\|Medtr7g011250.1	367	Chr. : chr07 From : 2674788 To : 2677963 Strand: -	Mtr.8606.1.S1_at	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=0; Caffeic acid O-methyltransferase OS=Malus domestica E-value=9e-90; Caffeic acid O-methyltransferase OS=Malus domestica E-value=2e-89; O-methyltransferase OS=Populus trichocarpa x Populus deltoides E-value=1e-88; Caffeic acid O-3-methyltransferase OS=Populus deltoides E-value=2e-88; ]
IMGA\|Medtr7g011280.1	369	Chr. : chr07 From : 2686151 To : 2689353 Strand: -	Mtr.12678.1.S1_at	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=0; Caffeic acid O-methyltransferase OS=Malus domestica E-value=3e-83; Caffeic acid O-methyltransferase OS=Malus domestica E-value=8e-83; Caffeic acid O-methyltransferase OS=Malus domestica E-value=8e-82; Caffeic acid O-methyltransferase OS=Malus domestica E-value=1e-81; ]
IMGA\|Medtr7g011310.1	246	Chr. : chr07 From : 2696246 To : 2697374 Strand: -	N/A	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=4e-88; Caffeic acid O-methyltransferase OS=Malus domestica E-value=2e-61; Caffeic acid O-methyltransferase OS=Malus domestica E-value=4e-61; 3' flavonoid O-methyltransferase OS=Chrysosplenium americanum E-value=5e-61; Caffeic acid O-methyltransferase OS=Malus domestica E-value=2e-60; ]
IMGA\|Medtr7g011330.1	375	Chr. : chr07 From : 2716203 To : 2718256 Strand: -	Mtr.41208.1.S1_at	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=0; Caffeic acid O-methyltransferase OS=Malus domestica E-value=3e-83; O-methyltransferase, putative OS=Ricinus communis E-value=7e-83; Caffeic acid O-methyltransferase OS=Jatropha curcas E-value=7e-83; Caffeic acid O-methyltransferase OS=Malus domestica E-value=1e-82; ]
IMGA\|Medtr7g011360.1	375	Chr. : chr07 From : 2729704 To : 2732556 Strand: -	N/A	Top 5 Hits: [ O-methyltransferase OS=Glycyrrhiza echinata E-value=0; Caffeic acid O-methyltransferase OS=Malus domestica E-value=2e-83; Caffeic acid O-methyltransferase OS=Jatropha curcas E-value=3e-82; Caffeic acid O-methyltransferase OS=Malus domestica E-value=3e-82; O-methyltransferase, putative OS=Ricinus communis E-value=3e-81; ]
IMGA\|Medtr7g146180.1	362	Chr. : chr07 From : 34911912 To : 34916208 Strand: -	N/A	Top 5 Hits: [ O-methyltransferase, family 2; Dimerisation OS=Medicago truncatula E-value=0; Catechol o-methyltransferase related OS=Populus trichocarpa E-value=0; O-methyltransferase, family 2; Dimerisation OS=Medicago truncatula E-value=0; Caffeic acid O-methyltransferase II OS=Nicotiana tabacum E-value=0; Catechol o-methyltransferase OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr8g081380.1	266	Chr. : chr08 From : 16667813 To : 16670259 Strand: -	N/A	Top 5 Hits: [ O-methyltransferase, family 2; Dimerisation OS=Medicago truncatula E-value=0; Catechol o-methyltransferase related OS=Populus trichocarpa E-value=4e-84; Catechol o-methyltransferase OS=Populus trichocarpa E-value=1e-81; O-methyltransferase, putative OS=Ricinus communis E-value=2e-81; Caffeic acid O-methyltransferase II OS=Nicotiana tabacum E-value=2e-80; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Lignin > Ferulic acid/coniferaldehyde/coniferyl alcohol 5-hydroxylase (F5H)
IMGA\|Medtr4g097200.1	222	Chr. : chr04 From : 20686817 To : 20688049 Strand: -	N/A	Top 5 Hits: [ Cald5H OS=Leucaena glauca E-value=6e-87; Ferulate 5-hydroxylase OS=Camptotheca acuminata E-value=6e-87; Ferulate 5-hydroxylase OS=Medicago sativa E-value=4e-86; Cytochrome P450 probable 5-hydroxylase for coniferaldehyde, coniferyl alcohol and ferulic acid OS=Populus trichocarpa E-value=7e-86; Ferulate 5-hydroxylase OS=Medicago sativa E-value=2e-85; ]
IMGA\|Medtr5g021320.1	519	Chr. : chr05 From : 8121034 To : 8124474 Strand: +	Mtr.10628.1.S1_at	Top 5 Hits: [ Ferulate 5-hydroxylase OS=Medicago sativa E-value=0; Ferulate 5-hydroxylase OS=Medicago sativa E-value=0; Cytochrome P450 monooxygenase CYP84A16 OS=Glycine max E-value=0; Cald5H OS=Leucaena glauca E-value=0; Cytochrome P450 monooxygenase CYP84A17 (Fragment) OS=Medicago truncatula E-value=0; ]
IMGA\|Medtr8g090380.1	510	Chr. : chr08 From : 19720361 To : 19724122 Strand: -	Mtr.20710.1.S1_at; Mtr.42553.1.S1_s_at	Top 5 Hits: [ Ferulate 5-hydroxylase OS=Medicago sativa E-value=0; Ferulate 5-hydroxylase OS=Medicago sativa E-value=0; Cald5H OS=Leucaena glauca E-value=0; Ferulate 5-hydroxylase OS=Camptotheca acuminata E-value=0; Cytochrome P450 monooxygenase CYP84A16 OS=Glycine max E-value=0; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Lignin > Hydroxycinnamoyl Coenzyme A: shikimate hydroxycinnamoyl transferase (HCT)
IMGA\|AC233655_10.1	432	Chr. : mth2-c1244 From : 83679 To : 86615 Strand: -	N/A	Top 5 Hits: [ Putative acyltransferase OS=Clitoria ternatea E-value=0; Putative acyltransferase OS=Clitoria ternatea E-value=0; Shikimate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=0; Shikimate O-hydroxycinnamoyltransferase OS=Trifolium pratense E-value=0; Quinate O-hydroxycinnamoyltransferase/shikimate O-hydroxycinnamoyltransferase OS=Populus trichocarpa E-value=0; ]
IMGA\|AC235673_32.1	451	Chr. : mth2-107o18 From : 147978 To : 149333 Strand: +	N/A	Top 5 Hits: [ Malate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=0; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=1e-91; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=2e-87; Putative anthranilate N-hydroxycinnamoyl/benzoyltransferase OS=Arabidopsis thaliana E-value=3e-83; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=6e-83; ]
IMGA\|Medtr3g031290.1	451	Chr. : chr03 From : 8757891 To : 8759246 Strand: +	N/A	Top 5 Hits: [ Malate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=0; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=1e-91; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=2e-87; Putative anthranilate N-hydroxycinnamoyl/benzoyltransferase OS=Arabidopsis thaliana E-value=3e-83; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=6e-83; ]
IMGA\|Medtr3g064390.1	456	Chr. : chr03 From : 14602100 To : 14604604 Strand: +	Mtr.33589.1.S1_at	Top 5 Hits: [ Malate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=0; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=2e-88; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=6e-84; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=7e-81; Putative anthranilate N-hydroxycinnamoyl/benzoyltransferase OS=Arabidopsis thaliana E-value=1e-80; ]
IMGA\|Medtr3g150860.1	435	Chr. : chr03 From : 39832577 To : 39835928 Strand: +	N/A	Top 5 Hits: [ Taxadien-5-alpha-ol O-acetyltransferase, putative OS=Ricinus communis E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=0; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein (Fragment) OS=Populus trichocarpa E-value=0; Putative N-hydroxycinnamoyl/benzoyltransferase OS=Arabidopsis thaliana E-value=0; ]
IMGA\|Medtr7g102650.1	466	Chr. : chr07 From : 22858230 To : 22859647 Strand: +	Mtr.20618.1.S1_at; Mtr.20618.1.S1_s_at	Top 5 Hits: [ Transferase OS=Medicago truncatula E-value=0; Transferase OS=Medicago truncatula E-value=0; Transferase OS=Medicago truncatula E-value=3e-94; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=4e-76; Malate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=2e-75; ]
IMGA\|Medtr7g102720.1	466	Chr. : chr07 From : 22872051 To : 22873468 Strand: -	Mtr.20618.1.S1_s_at; Mtr.20622.1.S1_at	Top 5 Hits: [ Transferase OS=Medicago truncatula E-value=0; Transferase OS=Medicago truncatula E-value=0; Transferase OS=Medicago truncatula E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=4e-76; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=7e-76; ]
IMGA\|Medtr7g102730.1	465	Chr. : chr07 From : 22878067 To : 22879516 Strand: -	N/A	Top 5 Hits: [ Transferase OS=Medicago truncatula E-value=0; Transferase OS=Medicago truncatula E-value=1e-86; Transferase OS=Medicago truncatula E-value=8e-81; Transferase, putative OS=Medicago truncatula E-value=7e-67; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=1e-66; ]
IMGA\|Medtr8g089790.1	420	Chr. : chr08 From : 19372348 To : 19376074 Strand: -	N/A	Top 5 Hits: [ Shikimate O-hydroxycinnamoyltransferase OS=Trifolium pratense E-value=0; Shikimate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=0; Putative acyltransferase OS=Clitoria ternatea E-value=0; Putative acyltransferase OS=Clitoria ternatea E-value=0; Alcohol acyl-transferase OS=Prunus mume E-value=0; ]
IMGA\|Medtr8g101590.1	457	Chr. : chr08 From : 22078589 To : 22079962 Strand: -	N/A	Top 5 Hits: [ Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=0; Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=0; Putative anthranilate N-hydroxycinnamoyl/benzoyltransferase OS=Arabidopsis thaliana E-value=0; Malate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=3e-87; ]
IMGA\|Medtr8g129460.1	457	Chr. : chr08 From : 30591223 To : 30592624 Strand: -	Mtr.15377.1.S1_s_at; Mtr.48031.1.S1_s_at	Top 5 Hits: [ Anthranilate N-benzoyltransferase protein, putative OS=Ricinus communis E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=0; Hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein OS=Populus trichocarpa E-value=0; Putative anthranilate N-hydroxycinnamoyl/benzoyltransferase OS=Arabidopsis thaliana E-value=0; Malate O-hydroxycinnamoyl transferase OS=Trifolium pratense E-value=2e-87; ]

Seq ID	Length	Coordinates	AffyProbes	Description
Lignin > Laccase (Laccase)
IMGA\|Medtr2g008450.1	579	Chr. : chr02 From : 1590646 To : 1593419 Strand: -	N/A	Top 5 Hits: [ Putative laccase OS=Rosa hybrid cultivar E-value=0; ]
IMGA\|Medtr3g097050.1	575	Chr. : chr03 From : 23068296 To : 23072589 Strand: -	N/A	Top 5 Hits: [ Diphenol oxidase laccase OS=Glycine max E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase 90c OS=Populus trichocarpa E-value=0; Laccase 90a OS=Populus trichocarpa E-value=0; Laccase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr3g147840.1	224	Chr. : chr03 From : 38391712 To : 38393197 Strand: +	N/A	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=5e-78; Putative laccase OS=Rosa hybrid cultivar E-value=9e-74; ]
IMGA\|Medtr3g147850.1	382	Chr. : chr03 From : 38393801 To : 38395880 Strand: +	N/A	Top 5 Hits: [ Putative laccase OS=Rosa hybrid cultivar E-value=0; ]
IMGA\|Medtr3g147860.1	564	Chr. : chr03 From : 38400074 To : 38403323 Strand: +	N/A	Top 5 Hits: [ Putative laccase OS=Rosa hybrid cultivar E-value=0; ]
IMGA\|Medtr4g012530.1	557	Chr. : chr04 From : 2133345 To : 2137759 Strand: +	N/A	Top 5 Hits: [ Laccase 1a OS=Populus trichocarpa E-value=0; Laccase 1b OS=Populus trichocarpa E-value=0; Laccase 1d (Fragment) OS=Populus trichocarpa E-value=0; Laccase 1c OS=Populus trichocarpa E-value=0; Diphenol oxidase OS=Nicotiana tabacum E-value=0; ]
IMGA\|Medtr4g084160.1	581	Chr. : chr04 From : 17610112 To : 17613557 Strand: -	N/A	Top 5 Hits: [ Laccase 110b OS=Populus trichocarpa E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase OS=Populus trichocarpa E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g020490.1	566	Chr. : chr05 From : 7752333 To : 7755496 Strand: +	Mtr.32041.1.S1_at; Mtr.7066.1.S1_at	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase OS=Pinus taeda E-value=0; Laccase OS=Pinus taeda E-value=0; Laccase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g020510.1	561	Chr. : chr05 From : 7763164 To : 7765448 Strand: +	N/A	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase OS=Pinus taeda E-value=0; Laccase OS=Pinus taeda E-value=0; Laccase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g078230.1	558	Chr. : chr05 From : 28972760 To : 28976643 Strand: +	N/A	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Diphenol oxidase OS=Nicotiana tabacum E-value=0; Laccase 1a OS=Populus trichocarpa E-value=0; Laccase 1d (Fragment) OS=Populus trichocarpa E-value=0; Laccase 1b OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr5g081380.1	560	Chr. : chr05 From : 30566027 To : 30569132 Strand: -	Mtr.2040.1.S1_at; Mtr.41285.1.S1_at; Mtr.9645.1.S1_at	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase 90c OS=Populus trichocarpa E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase 90a OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr5g089110.1	356	Chr. : chr05 From : 34576872 To : 34578142 Strand: +	N/A	Top 5 Hits: [ Laccase 3 OS=Populus trichocarpa E-value=2e-95; Laccase OS=Populus trichocarpa E-value=5e-93; Laccase OS=Populus trichocarpa E-value=3e-92; Laccase OS=Populus trichocarpa E-value=4e-92; Laccase, putative OS=Ricinus communis E-value=5e-91; ]
IMGA\|Medtr5g089140.1	562	Chr. : chr05 From : 34592154 To : 34595987 Strand: +	N/A	Top 5 Hits: [ Laccase 3 OS=Populus trichocarpa E-value=0; Laccase OS=Populus trichocarpa E-value=0; Laccase OS=Populus trichocarpa E-value=0; Laccase OS=Populus trichocarpa E-value=0; Laccase, putative OS=Ricinus communis E-value=0; ]
IMGA\|Medtr5g090860.1	499	Chr. : chr05 From : 35513440 To : 35517108 Strand: -	N/A	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase 90a OS=Populus trichocarpa E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Diphenol oxidase laccase OS=Glycine max E-value=0; Laccase 90c OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr7g064780.1	605	Chr. : chr07 From : 13151601 To : 13159021 Strand: +	Mtr.11230.1.S1_at; Mtr.44423.1.S1_at	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase OS=Liriodendron tulipifera E-value=0; Laccase OS=Liriodendron tulipifera E-value=0; Laccase OS=Liriodendron tulipifera E-value=0; ]
IMGA\|Medtr7g064830.1	558	Chr. : chr07 From : 13175148 To : 13177593 Strand: +	N/A	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase OS=Liriodendron tulipifera E-value=0; Laccase 110c OS=Populus trichocarpa E-value=0; ]
IMGA\|Medtr7g067600.1	581	Chr. : chr07 From : 13703995 To : 13708069 Strand: +	Mtr.13825.1.S1_at; Mtr.44366.1.S1_at	Top 5 Hits: [ Laccase, putative OS=Ricinus communis E-value=0; Laccase, putative OS=Ricinus communis E-value=0; Laccase OS=Liriodendron tulipifera E-value=0; Laccase OS=Liriodendron tulipifera E-value=0; ]