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Phenylpropanoids and plant defense -- an updated genomic perspective   
 
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Arabidopsis thaliana (Mouse-ear cress)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
AT1G20480.1 565 
Chr.  : chr1
From  : 7094833
To    : 7097114
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=0; ] 
AT1G20490.1 447 
Chr.  : chr1
From  : 7097293
To    : 7099695
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=7e-80; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-79; ] 
AT1G20500.1 550 
Chr.  : chr1
From  : 7100502
To    : 7102915
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
AT1G20510.1 546 
Chr.  : chr1
From  : 7103454
To    : 7105881
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
AT1G62940.1 542 
Chr.  : chr1
From  : 23310535
To    : 23312747
Strand: +
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
AT1G65060.1 561 
Chr.  : chr1
From  : 24167202
To    : 24171502
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; 4-coumarate:CoA ligase 1 OS=Ruta graveolens E-value=0; 4-coumarate:CoA ligase OS=Populus tremuloides E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; ]  Q9S777.1 Ehlting et al., 1999
AT3G48990.1 514 
Chr.  : chr3
From  : 18158747
To    : 18161379
Strand: -
252293_at Top 5 Hits: [ 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
AT4G05160.1 544 
Chr.  : chr4
From  : 2664385
To    : 2666707
Strand: +
255263_at Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
AT4G19010.1 566 
Chr.  : chr4
From  : 10411490
To    : 10414249
Strand: -
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ] 
AT5G38120.1 550 
Chr.  : chr5
From  : 15213765
To    : 15216205
Strand: +
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=0; ] 
AT5G63380.1 562 
Chr.  : chr5
From  : 25387411
To    : 25390063
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 

Glycine max (Soybean)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
Glyma01g01350.1 553 
Chr.  : Gm01
From  : 972976
To    : 978178
Strand: -
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ] 
Glyma01g44270.1 552 
Chr.  : Gm01
From  : 54974200
To    : 54978159
Strand: -
N/A Top 5 Hits: [ 4-coumarate:CoA ligase OS=Glycine max E-value=0; 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus tremuloides E-value=0; ]  P31687.2 Utsugi et al.,2002
Glyma04g24860.1 339 
Chr.  : Gm04
From  : 28516915
To    : 28518199
Strand: +
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=6e-69; Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=1e-68; ] 
Glyma04g36950.1 580 
Chr.  : Gm04
From  : 43444575
To    : 43452395
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
Glyma05g15220.1 348 
Chr.  : Gm05
From  : 16660058
To    : 16661203
Strand: +
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=1e-85; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=4e-74; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=2e-70; Acyl:coa ligase OS=Populus trichocarpa E-value=4e-69; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=9e-62; ] 
Glyma05g15230.1 514 
Chr.  : Gm05
From  : 16670749
To    : 16677986
Strand: +
Gma.6332.1.S1_at Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-99; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-94; Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=1e-90; ] 
Glyma06g18030.1 597 
Chr.  : Gm06
From  : 14349741
To    : 14354366
Strand: +
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
Glyma08g44190.1 436 
Chr.  : Gm08
From  : 43912871
To    : 43916865
Strand: +
GmaAffx.6734.1.S1_at Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
Glyma09g25470.1 518 
Chr.  : Gm09
From  : 31726387
To    : 31730890
Strand: +
Gma.3578.1.S1_at; Gma.3578.1.S1_s_at; GmaAffx.92100.1.S1_at; GmaAffx.92100.1.S1_s_at Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
Glyma09g34430.1 416 
Chr.  : Gm09
From  : 40809022
To    : 40811799
Strand: +
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=4e-93; Acyl:coa ligase OS=Populus trichocarpa E-value=4e-93; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=5e-71; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=9e-66; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=1e-61; ] 
Glyma11g01240.1 535 
Chr.  : Gm11
From  : 728019
To    : 732167
Strand: +
N/A Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; 4-coumarate:CoA ligase OS=Glycine max E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus tremuloides E-value=0; 4-coumarate:CoA ligase 4 OS=Populus trichocarpa x Populus deltoides E-value=0; ] 
Glyma11g09710.1 469 
Chr.  : Gm11
From  : 6919458
To    : 6923168
Strand: +
N/A Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:coA ligase 3 OS=Rubus idaeus E-value=0; 4-coumarate:CoA ligase 1 OS=Ruta graveolens E-value=0; 4-coumarate:CoA ligase OS=Ipomoea batatas E-value=0; ] 
Glyma11g20020.1 557 
Chr.  : Gm11
From  : 16819001
To    : 16825096
Strand: +
Gma.17493.1.S1_s_at; Gma.17493.2.S1_at Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; ] 
Glyma11g31310.1 479 
Chr.  : Gm11
From  : 32350374
To    : 32353419
Strand: +
Gma.7423.1.S1_a_at; Gma.7423.2.S1_a_at; GmaAffx.92827.1.S1_at Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; ] 
Glyma12g08460.1 351 
Chr.  : Gm12
From  : 6207216
To    : 6210719
Strand: -
Gma.17493.1.S1_s_at Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; ] 
Glyma13g01080.1 562 
Chr.  : Gm13
From  : 798836
To    : 805844
Strand: +
Gma.1190.1.S1_at; GmaAffx.28417.1.S1_at Top 5 Hits: [ 4-coumarate:coenzyme A ligase OS=Glycine max E-value=0; 4-coumarate:coA ligase 2 OS=Rubus idaeus E-value=0; 4-coumarate CoA ligase 1 OS=Leucaena glauca E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; ] 
Glyma13g39770.1 540 
Chr.  : Gm13
From  : 40295403
To    : 40300841
Strand: +
Gma.5032.1.S1_at; GmaAffx.83392.1.S1_at Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
Glyma13g44950.1 547 
Chr.  : Gm13
From  : 44256628
To    : 44259752
Strand: +
N/A Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 2 OS=Glycine max E-value=0; 4-coumarate:CoA ligase OS=Amorpha fruticosa E-value=0; 4-coumarate:CoA ligase OS=Humulus lupulus E-value=0; 4-coumarate CoA ligase 2 (Fragment) OS=Leucaena glauca E-value=0; 4-coumarate:CoA ligase OS=Betula platyphylla E-value=0; ]  AAC97600.1 Gandre et al., 2002
Glyma15g00390.1 538 
Chr.  : Gm15
From  : 190549
To    : 193855
Strand: -
Gma.4928.1.S1_a_at Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 2 OS=Glycine max E-value=0; 4-coumarate:CoA ligase OS=Amorpha fruticosa E-value=0; 4-coumarate CoA ligase 2 (Fragment) OS=Leucaena glauca E-value=0; 4-coumarate:CoA ligase OS=Betula platyphylla E-value=0; 4-coumarate:CoA ligase OS=Humulus lupulus E-value=0; ] 
Glyma16g31810.1 205 
Chr.  : Gm16
From  : 35085614
To    : 35086778
Strand: -
N/A Top 5 Hits: [ Putative acyl-CoA synthetase OS=Capsicum annuum E-value=5e-21; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-20; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=5e-19; Acyl:coa ligase OS=Populus trichocarpa E-value=9e-18; Putative 4-coumarate-CoA ligase (Fragment) OS=Solanum chilense E-value=1e-16; ] 
Glyma17g07170.1 547 
Chr.  : Gm17
From  : 5222706
To    : 5227313
Strand: +
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:coA ligase 2 OS=Rubus idaeus E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; ] 
Glyma17g07180.1 535 
Chr.  : Gm17
From  : 5244221
To    : 5247087
Strand: +
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:coA ligase 2 OS=Rubus idaeus E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; ] 
Glyma17g07190.1 566 
Chr.  : Gm17
From  : 5257986
To    : 5263760
Strand: +
Gma.1190.1.S1_at; GmaAffx.93625.1.S1_s_at Top 5 Hits: [ 4-coumarate:coenzyme A ligase OS=Glycine max E-value=0; 4-coumarate:coA ligase 2 OS=Rubus idaeus E-value=0; 4-coumarate CoA ligase 1 OS=Leucaena glauca E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; ]  AAL98709.1 Lindermayr et al., 2002
Glyma18g08550.1 527 
Chr.  : Gm18
From  : 7275186
To    : 7278880
Strand: -
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
Glyma19g22460.1 541 
Chr.  : Gm19
From  : 27236183
To    : 27245853
Strand: -
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
Glyma19g22480.1 292 
Chr.  : Gm19
From  : 27268278
To    : 27269318
Strand: +
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=3e-51; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=6e-40; Acyl:coa ligase OS=Populus trichocarpa E-value=1e-39; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=2e-33; Acyl:coa ligase OS=Populus trichocarpa E-value=2e-31; ] 
Glyma19g22490.1 418 
Chr.  : Gm19
From  : 27281473
To    : 27287741
Strand: +
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=1e-77; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=6e-74; Acyl:coa ligase OS=Populus trichocarpa E-value=8e-70; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=8e-67; Acyl:coa ligase OS=Populus trichocarpa E-value=9e-67; ] 
Glyma20g29850.1 481 
Chr.  : Gm20
From  : 38649189
To    : 38652619
Strand: -
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
Glyma20g33360.1 299 
Chr.  : Gm20
From  : 41957969
To    : 41959443
Strand: -
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=3e-75; Acyl:coa ligase OS=Populus trichocarpa E-value=2e-74; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=2e-74; Acyl:coa ligase OS=Populus trichocarpa E-value=9e-49; Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=1e-48; ] 

Lotus japonicus
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
chr2.CM0020.270.nc 556 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ] 
chr3.CM0070.120.nc 397 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
chr1.CM0064.390.nc 536 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
chr4.CM0061.190.nc 547 
N/A
N/A Top 5 Hits: [ 4-coumarate:coenzyme A ligase OS=Glycine max E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
chr2.CM0018.1240.nc 581 
N/A
N/A Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; 4-coumarate:CoA ligase OS=Glycine max E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase OS=Populus tremuloides E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; ] 
chr3.CM0127.410.nc 557 
N/A
N/A Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase OS=Ipomoea batatas E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus tremuloides E-value=0; ] 
LjSGA_063891.1 350 
N/A
N/A Top 5 Hits: [ 4-coumarate-CoA ligase-like protein (Fragment) OS=Coffea arabica E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
LjSGA_088777.2 330 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=3e-77; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=4e-68; Acyl:coa ligase OS=Populus trichocarpa E-value=5e-68; Acyl:coa ligase OS=Populus trichocarpa E-value=3e-67; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=7e-63; ] 
LjSGA_030709.1 352 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=3e-93; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=8e-70; ] 
LjSGA_037033.1 383 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
LjSGA_047173.2 246 
N/A
N/A Top 5 Hits: [ 4-coumarate:CoA ligase OS=Amorpha fruticosa E-value=5e-93; 4-coumarate CoA ligase 2 (Fragment) OS=Leucaena glauca E-value=3e-88; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=3e-87; 4-coumarate:CoA ligase isoenzyme 2 OS=Glycine max E-value=4e-86; 4-coumarate coenzyme A ligase OS=Betula luminifera E-value=1e-83; ] 
LjSGA_094072.1 323 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-47; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=2e-41; Acyl:coa ligase OS=Populus trichocarpa E-value=2e-41; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=4e-38; Acyl:coa ligase OS=Populus trichocarpa E-value=4e-38; ] 

Medicago truncatula (Barrel medic)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
IMGA|AC233655_1.1 551 
Chr.  : mth2-c1244
From  : 24780
To    : 29515
Strand: -
Mtr.42337.1.S1_at Top 5 Hits: [ 4-coumarate:CoA ligase OS=Amorpha fruticosa E-value=0; 4-coumarate:CoA ligase OS=Betula platyphylla E-value=0; 4-coumarate:CoA ligase isoenzyme 2 OS=Glycine max E-value=0; 4-coumarate CoA ligase 2 (Fragment) OS=Leucaena glauca E-value=0; 4-coumarate:CoA ligase OS=Humulus lupulus E-value=0; ] 
IMGA|Medtr1g087380.1 542 
Chr.  : chr01
From  : 17596379
To    : 17602444
Strand: -
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
IMGA|Medtr3g043450.1 515 
Chr.  : chr03
From  : 11785947
To    : 11793982
Strand: -
Mtr.12556.1.S1_at Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
IMGA|Medtr3g117330.1 562 
Chr.  : chr03
From  : 29530003
To    : 29534795
Strand: -
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; ] 
IMGA|Medtr3g117340.1 560 
Chr.  : chr03
From  : 29537488
To    : 29544585
Strand: -
Mtr.44778.1.S1_at; Mtr.45561.1.S1_at Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
IMGA|Medtr4g023340.1 539 
Chr.  : chr04
From  : 4954468
To    : 4958138
Strand: -
Mtr.25611.1.S1_at Top 5 Hits: [ 4-coumarate:CoA ligase OS=Amorpha fruticosa E-value=0; 4-coumarate CoA ligase 2 (Fragment) OS=Leucaena glauca E-value=0; 4-coumarate:CoA ligase OS=Betula platyphylla E-value=0; 4-coumarate:CoA ligase OS=Humulus lupulus E-value=0; 4-coumarate:CoA ligase isoenzyme 2 OS=Glycine max E-value=0; ] 
IMGA|Medtr4g107290.1 478 
Chr.  : chr04
From  : 23387848
To    : 23390872
Strand: +
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; ] 
IMGA|Medtr5g007720.1 587 
Chr.  : chr05
From  : 1270333
To    : 1276333
Strand: +
Mtr.41031.1.S1_at Top 5 Hits: [ 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; 4-coumarate:CoA ligase OS=Glycine max E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:coA ligase 3 OS=Rubus idaeus E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; ] 
IMGA|Medtr5g027650.1 555 
Chr.  : chr05
From  : 11306876
To    : 11309428
Strand: -
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ] 
IMGA|Medtr5g027670.1 568 
Chr.  : chr05
From  : 11317383
To    : 11319976
Strand: -
Mtr.42330.1.S1_at Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ] 

Oryza sativa (Rice)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
LOC_Os01g67530.1 442 
Chr.  : Chr1
From  : 39251940
To    : 39255710
Strand: +
N/A Top 5 Hits: [ Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-98; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=3e-92; Acyl:coa ligase OS=Populus trichocarpa E-value=3e-92; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=8e-88; ] 
LOC_Os01g67540.1 598 
Chr.  : Chr1
From  : 39256795
To    : 39260319
Strand: +
OsAffx.21790.1.S1_at Top 5 Hits: [ Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
LOC_Os02g08100.1 554 
Chr.  : Chr2
From  : 4280496
To    : 4285928
Strand: +
Os.10669.1.S1_at Top 5 Hits: [ 4-coumarate coenzyme A ligase OS=Zea mays E-value=0; 4-coumarate coenzyme A ligase 1 OS=Panicum virgatum E-value=0; 4-coumarate:CoA ligase OS=Neosinocalamus affinis E-value=0; cDNA clone:J023002B16, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate--CoA ligase 4CL3 OS=Lolium perenne E-value=0; ] 
LOC_Os02g46970.1 569 
Chr.  : Chr2
From  : 28671334
To    : 28675033
Strand: -
N/A Top 5 Hits: [ cDNA clone:001-200-D12, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate--CoA ligase 4CL1 OS=Lolium perenne E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Ipomoea batatas E-value=0; ] 
LOC_Os03g05780.1 552 
Chr.  : Chr3
From  : 2882001
To    : 2886918
Strand: -
N/A Top 5 Hits: [ cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
LOC_Os04g24530.1 555 
Chr.  : Chr4
From  : 14063332
To    : 14065452
Strand: -
OsAffx.13955.1.S1_at; OsAffx.13955.1.S1_x_at Top 5 Hits: [ H0211A12.17 protein OS=Oryza sativa E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
LOC_Os04g58710.1 518 
Chr.  : Chr4
From  : 34723331
To    : 34725551
Strand: -
Os.22374.1.S2_a_at Top 5 Hits: [ Os04g0683700 protein OS=Oryza sativa subsp. japonica E-value=0; H0306F12.7 protein OS=Oryza sativa E-value=0; Peroxisomal-coenzyme A synthetase OS=Zea mays E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
LOC_Os06g44620.1 559 
Chr.  : Chr6
From  : 26942097
To    : 26948892
Strand: -
Os.8020.1.S1_at Top 5 Hits: [ cDNA clone:J023002B16, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate:CoA ligase OS=Neosinocalamus affinis E-value=0; 4-coumarate--CoA ligase 4CL2 OS=Lolium perenne E-value=0; 4-coumarate coenzyme A ligase OS=Zea mays E-value=0; 4-coumarate coenzyme A ligase 1 OS=Panicum virgatum E-value=0; ] 
LOC_Os07g17970.1 558 
Chr.  : Chr7
From  : 10635451
To    : 10642146
Strand: +
Os.15398.1.S1_at Top 5 Hits: [ cDNA clone:002-148-E06, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ABP-1 OS=Triticum aestivum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
LOC_Os08g04770.1 591 
Chr.  : Chr8
From  : 2381158
To    : 2384164
Strand: +
N/A Top 5 Hits: [ Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
LOC_Os08g14760.1 564 
Chr.  : Chr8
From  : 8873183
To    : 8877931
Strand: +
Os.52921.1.S1_at Top 5 Hits: [ cDNA clone:J023036P12, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate coenzyme A ligase 1 OS=Panicum virgatum E-value=0; 4-coumarate--CoA ligase 4CL2 OS=Lolium perenne E-value=0; 4-coumarate:CoA ligase OS=Neosinocalamus affinis E-value=0; cDNA clone:J023002B16, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
LOC_Os08g34790.1 539 
Chr.  : Chr8
From  : 21869698
To    : 21872785
Strand: -
Os.19375.1.S1_at Top 5 Hits: [ 4-coumarate:coA ligase 2 OS=Rubus idaeus E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-coumarate:CoA ligase 2 OS=Populus trichocarpa x Populus deltoides E-value=0; ] 
LOC_Os10g42800.1 564 
Chr.  : Chr10
From  : 23011693
To    : 23015058
Strand: -
N/A Top 5 Hits: [ Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 

Physcomitrella patens (Moss)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|152177| e_gw1.356.14.1 476 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Phypa1_1|113172| e_gw1.6.71.1 552 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Phypa1_1|117032| e_gw1.18.145.1 515 
N/A
N/A Top 5 Hits: [ Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Phypa1_1|140413| e_gw1.167.67.1 539 
N/A
N/A Top 5 Hits: [ 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. californica E-value=0; 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 1 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 1 OS=Physcomitrella patens subsp. patens E-value=0; ] 
jgi|Phypa1_1|150981| e_gw1.325.2.1 563 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
jgi|Phypa1_1|104959| estExt_fgenesh1_pm.C _200030 533 
N/A
N/A Top 5 Hits: [ 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. californica E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 4 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 1 OS=Physcomitrella patens subsp. magdalenae E-value=0; ] 
jgi|Phypa1_1|233094| estExt_fgenesh2_pg.C _710053 527 
N/A
N/A Top 5 Hits: [ 4-coumarate:coenzyme A ligase 3 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 3 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 3 OS=Physcomitrella patens subsp. californica E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. magdalenae E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. californica E-value=0; ]  ABV60449.1 Mogi et al.,2009
jgi|Phypa1_1|122068| e_gw1.38.65.1 535 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 

Populus trichocarpa (Black cottonwood)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Poptr1|63127|fge nesh1_pg.C_LG_I00047 9 545 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
jgi|Poptr1|64915|fge nesh1_pg.C_LG_I00226 7 338 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=4e-93; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=4e-70; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=5e-65; Acyl:coa ligase OS=Populus trichocarpa E-value=1e-62; ] 
jgi|Poptr1|80562|fge nesh1_pg.C_LG_X00049 2 552 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Poptr1|343915|fg enesh1_pm.C_LG_III00 0683 543 
N/A
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus tomentosa E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus tomentosa E-value=0; 4-coumarate:CoA ligase 3 OS=Populus trichocarpa x Populus deltoides E-value=0; ] 
jgi|Poptr1|343503|fg enesh1_pm.C_LG_III00 0271 557 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ] 
jgi|Poptr1|547738|eu gene3.00010179 540 
N/A
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 3 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-coumarate:CoA ligase OS=Populus deltoides E-value=0; 4-coumarate:CoA ligase OS=Populus tomentosa E-value=0; 4-coumarate:CoA ligase OS=Populus tomentosa E-value=0; ]  AAC24503.1 Hu et al., 1998
jgi|Poptr1|554790|eu gene3.00031423 399 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-98; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=6e-86; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=1e-85; H0211A12.17 protein OS=Oryza sativa E-value=3e-84; ] 
jgi|Poptr1|570222|eu gene3.00120875 550 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Poptr1|570225|eu gene3.00120878 301 
N/A
N/A Top 5 Hits: [ 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=2e-76; Acyl:coa ligase OS=Populus trichocarpa E-value=2e-76; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=2e-71; ] 
jgi|Poptr1|576743|eu gene3.00160878 247 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=2e-53; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=2e-37; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=4e-37; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=3e-34; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=2e-29; ] 
jgi|Poptr1|578610|eu gene3.00180834 556 
N/A
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 2 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Poptr1|582864|eu gene3.144740001 265 
N/A
N/A Top 5 Hits: [ AMP-dependent synthetase and ligase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) E-value=0; Putative AMP-dependent synthetase and ligase, putative o-succinylbenzoate--CoA ligase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) E-value=0; AMP-dependent synthetase and ligase OS=Ralstonia eutropha (strain JMP134) E-value=0; 4-Coumarate-CoA ligase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) E-value=0; AMP-dependent synthetase and ligase OS=Ralstonia eutropha (strain JMP134) E-value=0; ] 
jgi|Poptr1|662119|gr ail3.0015024001 508 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Poptr1|665396|gr ail3.0099003002 570 
N/A
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 4 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-coumarate:CoA ligase OS=Populus tremuloides E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; ]  AAC24504.1 Rubin and Greenberg, 1998
jgi|Poptr1|679285|gr ail3.5761000101 341 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=3e-92; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=1e-85; Acyl:coa ligase OS=Populus trichocarpa E-value=2e-85; ] 
jgi|Poptr1|703451|es tExt_fgenesh1_pg_v1. C_640065 548 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Poptr1|704057|es tExt_fgenesh1_pg_v1. C_1210003 545 
N/A
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-coumarate:CoA ligase 2 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Poptr1|704152|es tExt_fgenesh1_pg_v1. C_1230059 543 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
jgi|Poptr1|709380|es tExt_Genewise1_v1.C_ LG_I8990 522 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
jgi|Poptr1|714367|es tExt_Genewise1_v1.C_ LG_IV4037 543 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 

Sorghum bicolor (Sorghum)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Sorbi1|145581|es tExt_fgenesh1_pm.C_c hr_60575 502 
N/A
N/A Top 5 Hits: [ Peroxisomal-coenzyme A synthetase OS=Zea mays E-value=0; Os04g0683700 protein OS=Oryza sativa subsp. japonica E-value=0; H0306F12.7 protein OS=Oryza sativa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
jgi|Sorbi1|4773540|e _gw1.1.12495.1 573 
N/A
N/A Top 5 Hits: [ Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Sorbi1|4781390|e _gw1.1.4154.1 564 
N/A
N/A Top 5 Hits: [ cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Sorbi1|4784478|e _gw1.1.4092.1 563 
N/A
N/A Top 5 Hits: [ cDNA clone:002-148-E06, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ABP-1 OS=Triticum aestivum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate:CoA ligase OS=Populus trichocarpa E-value=4e-98; ] 
jgi|Sorbi1|4792563|e _gw1.2.286.1 553 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Sorbi1|4794897|e _gw1.2.275.1 555 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Sorbi1|4795561|e _gw1.2.13285.1 555 
N/A
N/A Top 5 Hits: [ cDNA clone:002-148-E06, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ABP-1 OS=Triticum aestivum E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Sorbi1|4872391|e stExt_Genewise1Plus. C_chr_111587 553 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Sorbi1|4877106|e stExt_Genewise1Plus. C_chr_30081 561 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; ] 
jgi|Sorbi1|4882293|e stExt_Genewise1Plus. C_chr_41142 555 
N/A
N/A Top 5 Hits: [ 4-coumarate coenzyme A ligase OS=Zea mays E-value=0; 4-coumarate coenzyme A ligase 1 OS=Panicum virgatum E-value=0; 4-coumarate--CoA ligase 4CL3 OS=Lolium perenne E-value=0; 4-coumarate:CoA ligase OS=Neosinocalamus affinis E-value=0; cDNA clone:J023002B16, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
jgi|Sorbi1|4884343|e stExt_Genewise1Plus. C_chr_48104 566 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 4CL1 OS=Lolium perenne E-value=0; cDNA clone:001-200-D12, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate:CoA ligase OS=Ipomoea batatas E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Sorbi1|5041822|S b06g016630 525 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; ] 
jgi|Sorbi1|5054199|S b03g042910 555 
N/A
N/A Top 5 Hits: [ Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Sorbi1|5058594|S b07g007810 571 
N/A
N/A Top 5 Hits: [ cDNA clone:J023036P12, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate coenzyme A ligase 1 OS=Panicum virgatum E-value=0; 4-coumarate--CoA ligase 4CL3 OS=Lolium perenne E-value=0; 4-coumarate:CoA ligase OS=Neosinocalamus affinis E-value=0; cDNA clone:J023002B16, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
jgi|Sorbi1|5058804|S b07g022040 552 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-coumarate:CoA ligase 2 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; ] 
jgi|Sorbi1|5062037|S b10g026130 557 
N/A
N/A Top 5 Hits: [ 4-coumarate:CoA ligase OS=Neosinocalamus affinis E-value=0; cDNA clone:J023002B16, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate--CoA ligase 4CL2 OS=Lolium perenne E-value=0; 4-coumarate coenzyme A ligase 1 OS=Panicum virgatum E-value=0; 4-coumarate coenzyme A ligase OS=Zea mays E-value=0; ] 

Selaginella moellendorffii (Club-mosses)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Selmo1|85691|e_g w1.7.951.1 514 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Selmo1|157069|es tExt_Genewise1.C_650 313 523 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
jgi|Selmo1|124291|e_ gw1.74.12.1 540 
N/A
N/A Top 5 Hits: [ 4-coumarate:CoA ligase OS=Pinus massoniana E-value=0; 4-coumarate-CoA ligase OS=Pinus radiata E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. californica E-value=0; 4-coumarate:coenzyme A ligase 2 OS=Physcomitrella patens subsp. patens E-value=0; 4-coumarate:coenzyme A ligase 1 OS=Physcomitrella patens subsp. magdalenae E-value=0; ] 
jgi|Selmo1|272150|es tExt_fgenesh1_kg.C_1 100002 531 
N/A
N/A Top 5 Hits: [ Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Selmo1|116986|e_ gw1.55.168.1 555 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; ] 
jgi|Selmo1|268211|es tExt_fgenesh1_pm.C_3 90014 532 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Selmo1|115483|e_ gw1.51.236.1 555 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; ] 
jgi|Selmo1|133629|e_ gw1.120.91.1 551 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Selmo1|110329|e_ gw1.40.406.1 548 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Selmo1|116209|e_ gw1.53.281.1 514 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
jgi|Selmo1|123905|e_ gw1.73.173.1 593 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; ] 
jgi|Selmo1|128539|e_ gw1.90.90.1 595 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; ] 
jgi|Selmo1|446445|es tExt_fgenesh2_pg.C_7 00157 545 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 

Vitis vinifera (Wine grape)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
GSVIVP00000396001 602 
N/A
N/A Top 5 Hits: [ Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
GSVIVP00002799001 555 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; ] 
GSVIVP00003591001 571 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; ] 
GSVIVP00009148001 523 
N/A
N/A Top 5 Hits: [ Acyl:coa ligase OS=Populus trichocarpa E-value=0; Putative acyl-CoA synthetase OS=Capsicum annuum E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-CoA ligase-like protein OS=Arabidopsis thaliana E-value=0; ] 
GSVIVP00014031001 378 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase OS=Populus tremuloides E-value=0; 4-coumarate:CoA ligase 4 OS=Populus trichocarpa x Populus deltoides E-value=0; ] 
GSVIVP00017901001 520 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
GSVIVP00020554001 427 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 
GSVIVP00020555001 543 
N/A
N/A Top 5 Hits: [ 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; ] 
GSVIVP00022179001 544 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ] 
GSVIVP00031383001 548 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; Putative 4-coumarate-CoA ligase 2 OS=Capsicum annuum E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; ] 
GSVIVP00031385001 539 
N/A
N/A Top 5 Hits: [ 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase 1 OS=Populus trichocarpa x Populus deltoides E-value=0; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=0; Putative 4-coumarate-CoA ligase 2 OS=Capsicum annuum E-value=0; ] 
GSVIVP00035068001 550 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 

Zea mays (Maize)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
GRMZM2G014651_P01 610 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; ] 
GRMZM2G019746_P01 560 
N/A
N/A Top 5 Hits: [ AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; cDNA clone:002-148-E06, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
GRMZM2G048522_P01 421 
N/A
N/A Top 5 Hits: [ 4-coumaroyl-coenzyme A ligase OS=Allium cepa E-value=2e-62; 4-coumarate:coA ligase 2 OS=Rubus idaeus E-value=3e-62; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=2e-60; 4-coumarate CoA ligase 1 OS=Leucaena glauca E-value=6e-60; 4-Coumarate:CoA ligase (Fragment) OS=Populus trichocarpa E-value=1e-59; ] 
GRMZM2G054013_P03 575 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 4CL1 OS=Lolium perenne E-value=0; cDNA clone:001-200-D12, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-Coumarate:CoA ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase OS=Ipomoea batatas E-value=0; ] 
GRMZM2G055320_P01 639 
N/A
N/A Top 5 Hits: [ 4-coumarate:CoA ligase OS=Neosinocalamus affinis E-value=0; cDNA clone:J023002B16, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate coenzyme A ligase 1 OS=Panicum virgatum E-value=0; 4-coumarate--CoA ligase 4CL2 OS=Lolium perenne E-value=0; 4-coumarate coenzyme A ligase OS=Zea mays E-value=0; ] 
GRMZM2G085856_P01 408 
N/A
N/A Top 5 Hits: [ Os02g0822700 protein OS=Oryza sativa subsp. japonica E-value=1e-23; 4-coumarate-CoA ligase-like protein OS=Oryza sativa subsp. japonica E-value=2e-19; ] 
GRMZM2G091643_P01 463 
N/A
N/A Top 5 Hits: [ cDNA clone:002-148-E06, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; ABP-1 OS=Triticum aestivum E-value=0; Putative 4-coumarate:coenzyme A ligase OS=Oryza sativa subsp. japonica E-value=4e-94; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=4e-89; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=1e-85; ] 
GRMZM2G122787_P02 555 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; cDNA, clone: J075140K23, full insert sequence OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; ] 
GRMZM2G145179_P01 610 
N/A
N/A Top 5 Hits: [ 4-coumarate--CoA ligase 2 OS=Zea mays E-value=0; H0211A12.17 protein OS=Oryza sativa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; 4-coumarate:CoA ligase-like OS=Nicotiana sylvestris E-value=0; ] 
GRMZM2G433624_P01 575 
N/A
N/A Top 5 Hits: [ Os08g0143300 protein OS=Oryza sativa subsp. japonica E-value=0; Os10g0578950 protein OS=Oryza sativa subsp. japonica E-value=0; 4-coumarate-coa ligase OS=Populus trichocarpa E-value=0; Acyl:coa ligase OS=Populus trichocarpa E-value=0; AMP dependent CoA ligase, putative OS=Ricinus communis E-value=0; ] 


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