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Phenylpropanoids and plant defense -- an updated genomic perspective   
 
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Glycine max (Soybean)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
Glyma09g30000 291  
Chr.  : Gm09
From  : 36863388
To    : 36868096
Strand: -
 Gma.11200.1.S1_at Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Deoxymugineic acid synthase1 OS=Zea mays E-value=6e-98; Os03g0237100 protein OS=Oryza sativa subsp. japonica E-value=1e-97; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-97; Deoxymugineic acid synthase1 OS=Oryza sativa subsp. japonica E-value=3e-97; ] 
Glyma16g34560 320  
Chr.  : Gm16
From  : 37180578
To    : 37183199
Strand: -
 Gma.11200.1.S1_at Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; ] 
Glyma18g52250 315  
Chr.  : Gm18
From  : 60909653
To    : 60910895
Strand: -
 Gma.3557.2.S1_s_at Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; ] 
Glyma14g00870 257  
Chr.  : Gm14
From  : 456385
To    : 458254
Strand: +
 Gma.5529.1.S1_at Top 5 Hits: [ Chalcone reductase OS=Pueraria lobata E-value=0; Chalcone reductase OS=Glycine max E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; ] 
Glyma20g03900 321  
Chr.  : Gm20
From  : 3802837
To    : 3806011
Strand: +
 Gma.9686.1.S1_at Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=0; Chalcone reductase OS=Glycine max E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; ] 
Glyma02g47750 315  
Chr.  : Gm02
From  : 51242652
To    : 51244001
Strand: -
 GmaAffx.91944.1.S1_s_at Top 5 Hits: [ Chalcone reductase OS=Pueraria lobata E-value=0; Chalcone reductase OS=Glycine max E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; ] 
Glyma02g31440 339  
Chr.  : Gm02
From  : 34348288
To    : 34352448
Strand: +
 N/A Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=5e-79; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-78; Aldo/keto reductase OS=Fragaria ananassa E-value=2e-78; Chalcone reductase OS=Glycine max E-value=9e-78; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-77; ] 
Glyma09g30010 318  
Chr.  : Gm09
From  : 36879993
To    : 36882408
Strand: -
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-98; Aldo-keto reductase, putative OS=Ricinus communis E-value=1e-97; NADPH-dependent codeinone reductase-like protein OS=Papaver bracteatum E-value=2e-97; NADPH-dependent codeinone reductase-like protein OS=Papaver bracteatum E-value=3e-97; ] 
Glyma09g36390 315  
Chr.  : Gm09
From  : 42145480
To    : 42147500
Strand: +
 N/A Top 5 Hits: [ Aldo-keto reductase, putative OS=Ricinus communis E-value=0; Aldose reductase-like protein OS=Arabidopsis thaliana E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-75; Chalcone reductase OS=Sesbania rostrata E-value=3e-71; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=3e-71; ] 
Glyma16g34570 322  
Chr.  : Gm16
From  : 37184848
To    : 37188007
Strand: -
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=5e-97; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-96; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=7e-96; Deoxymugineic acid synthase1 OS=Zea mays E-value=1e-94; ] 
Glyma16g34580 293  
Chr.  : Gm16
From  : 37193015
To    : 37195209
Strand: -
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=3e-79; Aldo-keto reductase, putative OS=Ricinus communis E-value=1e-70; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-70; NADPH-dependent codeinone reductase-like protein OS=Papaver nudicaule E-value=1e-69; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-69; ] 

Lotus japonicus
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
chr6.CM0037.1000.nc 312  
N/A
 N/A Top 5 Hits: [ Aldo-keto reductase, putative OS=Ricinus communis E-value=4e-98; Aldo/keto reductase OS=Fragaria ananassa E-value=3e-97; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=2e-96; Chalcone reductase OS=Pueraria lobata E-value=2e-94; Polyketide reductase OS=Lotus japonicus E-value=3e-94; ] 
chr6.CM0037.940.nc 284  
N/A
 N/A Top 5 Hits: [ Aldo/keto reductase OS=Fragaria ananassa E-value=3e-62; Aldo-keto reductase, putative OS=Ricinus communis E-value=6e-57; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-56; Chalcone reductase OS=Pueraria lobata E-value=2e-56; Aldo-keto reductase, putative OS=Ricinus communis E-value=1e-55; ] 
chr2.CM0191.390.nc 315  
N/A
 N/A Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ] 
chr2.CM0191.400.nc 312  
N/A
 N/A Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ] 
chr2.CM0191.410.nc 259  
N/A
 N/A Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; ] 
chr2.CM0191.480.nc 313  
N/A
 N/A Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ] 
chr1.CM0215.150.nc 308  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=8e-87; Chalcone reductase OS=Pueraria lobata E-value=1e-80; Polyketide reductase OS=Lotus japonicus E-value=1e-79; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=3e-76; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=3e-76; ] 
chr5.CM0345.630.nd 241  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=1e-69; Chalcone reductase OS=Pueraria lobata E-value=9e-69; Polyketide reductase OS=Lotus japonicus E-value=1e-66; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=7e-65; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=7e-65; ] 
CM1092.70.nc 316  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; ] 
CM1092.80.nc 316  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; ] 
LjT35G18.70.nd 321  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=0; NADPH-dependent codeinone reductase-like protein OS=Papaver nudicaule E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; ] 
LjT35G18.80.nd 214  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=4e-95; Deoxymugineic acid synthase1 OS=Hordeum vulgare E-value=4e-74; Aldo-keto reductase, putative OS=Ricinus communis E-value=1e-73; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-73; Deoxymugineic acid synthase1 OS=Zea mays E-value=2e-73; ] 
LjT35G18.90.nd 318  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=6e-97; Aldo-keto reductase, putative OS=Ricinus communis E-value=9e-97; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=7e-94; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-93; ] 
LjT35G18.140.nd 322  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=5e-92; Aldo-keto reductase, putative OS=Ricinus communis E-value=4e-91; Deoxymugineic acid synthase1 OS=Hordeum vulgare E-value=9e-90; Aldo-keto reductase, putative OS=Ricinus communis E-value=6e-89; ] 
LjSGA_074327.1 259  
N/A
 N/A Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=7e-63; Chalcone reductase OS=Pueraria lobata E-value=4e-62; Polyketide reductase OS=Lotus japonicus E-value=5e-59; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=7e-59; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=7e-59; ] 
LjSGA_019910.1 314  
N/A
 N/A Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; ] 

Medicago truncatula (Barrel medic)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
Medtr3g106150 315  
Chr.  : chr03
From  : 26693884
To    : 26695935
Strand: +
 N/A Top 5 Hits: [ Chalcone reductase OS=Glycine max E-value=0; Chalcone reductase OS=Pueraria lobata E-value=0; Polyketide reductase OS=Lotus japonicus E-value=0; Polyketide reductase OS=Glycyrrhiza echinata E-value=0; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=0; ] 
Medtr4g097740 300  
Chr.  : chr04
From  : 20969918
To    : 20971968
Strand: +
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-97; Aldo-keto reductase, putative OS=Ricinus communis E-value=5e-95; Aldo-keto reductase, putative OS=Ricinus communis E-value=9e-95; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=1e-91; ] 
Medtr4g097770 331  
Chr.  : chr04
From  : 20981453
To    : 20983240
Strand: +
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-97; Aldo-keto reductase, putative OS=Ricinus communis E-value=6e-95; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-93; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=7e-92; ] 
Medtr4g097780 308  
Chr.  : chr04
From  : 20984406
To    : 20986141
Strand: +
 N/A Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Reductase 1 OS=Hydrangea macrophylla E-value=1e-86; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-86; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-85; Aldo-keto reductase, putative OS=Ricinus communis E-value=4e-84; ] 
Medtr5g105610 312  
Chr.  : chr05
From  : 42415018
To    : 42416368
Strand: -
 N/A Top 5 Hits: [ Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ] 
Medtr5g105620 312  
Chr.  : chr05
From  : 42424128
To    : 42425511
Strand: -
 Mtr.17404.1.S1_s_at Top 5 Hits: [ Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ] 
Medtr5g105640 312  
Chr.  : chr05
From  : 42430365
To    : 42431825
Strand: +
 Mtr.17404.1.S1_s_at Top 5 Hits: [ Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; Chalcone reductase OS=Medicago sativa E-value=0; ] 

Populus trichocarpa (Black cottonwood)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Poptr1|345668|fg enesh1_pm.C_LG_XII00 0025 286  
N/A
 N/A putative; Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=8e-94; Aldo-keto reductase, putative OS=Ricinus communis E-value=6e-92; Aldo-keto reductase, putative OS=Ricinus communis E-value=7e-91; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=2e-88; ] 

Sorghum bicolor (Sorghum)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Sorbi1|4833810|e _gw1.6.522.1 312  
N/A
 N/A putative; Top 5 Hits: [ NAD(P)H-dependent oxidoreductase OS=Zea mays E-value=0; Os04g0167800 protein OS=Oryza sativa subsp. japonica E-value=0; OSIGBa0136O08-OSIGBa0153H12.9 protein OS=Oryza sativa E-value=0; Chalcone reductase OS=Sesbania rostrata E-value=4e-89; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-87; ] 
jgi|Sorbi1|5041294|S b06g001700 314  
N/A
 N/A putative; Top 5 Hits: [ NAD(P)H-dependent oxidoreductase OS=Zea mays E-value=0; Os04g0167800 protein OS=Oryza sativa subsp. japonica E-value=0; OSIGBa0136O08-OSIGBa0153H12.9 protein OS=Oryza sativa E-value=0; Chalcone reductase OS=Sesbania rostrata E-value=2e-89; Deoxymugineic acid synthase1 OS=Oryza sativa subsp. japonica E-value=2e-87; ] 

Selaginella moellendorffii (Club-mosses)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Selmo1|130110|e_ gw1.98.57.1 267  
N/A
 N/A putative; Top 5 Hits: [ Polyketide reductase OS=Lotus japonicus E-value=1e-55; Chalcone reductase OS=Pueraria lobata E-value=4e-54; Polyketide reductase OS=Glycyrrhiza echinata E-value=6e-54; Polyketide reductase (GGPKR2) OS=Glycyrrhiza glabra E-value=9e-53; Polyketide reductase (GGPKR1) OS=Glycyrrhiza glabra E-value=9e-53; ] 
jgi|Selmo1|159153|es tExt_Genewise1.C_860 099 302  
N/A
 N/A putative; Top 5 Hits: [ Aldose reductase-like protein OS=Arabidopsis thaliana E-value=3e-76; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-76; Aldo-keto reductase, putative OS=Ricinus communis E-value=3e-75; Chalcone reductase OS=Sesbania rostrata E-value=3e-73; Deoxymugineic acid synthase1 OS=Zea mays E-value=1e-72; ] 

Vitis vinifera (Wine grape)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
GSVIVP00007069001 295  
N/A
 N/A putative; Top 5 Hits: [ Aldo-keto reductase, putative OS=Ricinus communis E-value=0; Aldose reductase-like protein OS=Arabidopsis thaliana E-value=2e-90; Chalcone reductase OS=Sesbania rostrata E-value=3e-59; Aldo-keto reductase, putative OS=Ricinus communis E-value=6e-58; Aldo-keto reductase, putative OS=Ricinus communis E-value=7e-58; ] 
GSVIVP00033019001 318  
N/A
 N/A putative; Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; Aldo-keto reductase, putative OS=Ricinus communis E-value=0; ] 
GSVIVP00033021001 245  
N/A
 N/A putative; Top 5 Hits: [ Chalcone reductase OS=Sesbania rostrata E-value=9e-83; Aldo-keto reductase, putative OS=Ricinus communis E-value=2e-76; Putative NADPH-dependent oxidoreductase OS=Papaver somniferum E-value=5e-73; Deoxymugineic acid synthase1 OS=Hordeum vulgare E-value=8e-73; Deoxymugineic acid synthase1 OS=Zea mays E-value=1e-72; ] 

Zea mays (Maize)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
GRMZM2G415579_P01 313  
N/A
 N/A putative; Top 5 Hits: [ NAD(P)H-dependent oxidoreductase OS=Zea mays E-value=0; Os04g0167800 protein OS=Oryza sativa subsp. japonica E-value=0; OSIGBa0136O08-OSIGBa0153H12.9 protein OS=Oryza sativa E-value=0; Chalcone reductase OS=Sesbania rostrata E-value=3e-89; Os03g0237100 protein OS=Oryza sativa subsp. japonica E-value=3e-87; ] 


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