The Online Data Resource for Review:
Phenylpropanoids and plant defense -- an updated genomic perspective   
 
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Arabidopsis thaliana (Mouse-ear cress)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
AT2G30490.1 505  
Chr.  : chr2
From  : 12993663
To    : 12995770
Strand: -
 N/A Top 5 Hits: [ Cinnamate-4-hydroxylase OS=Arabidopsis thaliana E-value=0; Cinnamate-4-hydroxylase OS=Arabidopsis thaliana E-value=0; Cinnamate-4-hydroxylase OS=Arabidopsis thaliana E-value=0; Cinnamate-4-hydroxylase OS=Arabidopsis thaliana E-value=0; Cinnamate 4-hydroxylase OS=Arabidopsis thaliana E-value=0; ]  P92994.1 Schilmiller et al., 2009

Glycine max (Soybean)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
Glyma02g40290.1 506  
Chr.  : Gm02
From  : 45490798
To    : 45495043
Strand: -
 Gma.3881.1.S1_at Top 5 Hits: [ Coumarate 4-hydroxylase OS=Glycine max E-value=0; C4H OS=Glycine max E-value=0; Cinnamate-4-hydroxylase OS=Rubus occidentalis E-value=0; Cinnamate-4-hydroxylase OS=Rubus coreanus E-value=0; Cinnamate-4-hydroxylase OS=Rubus sp. SSL-2007 E-value=0; ] 
Glyma10g42230.1 473  
Chr.  : Gm10
From  : 49233735
To    : 49235771
Strand: +
 N/A Top 5 Hits: [ Cinnamate 4-hydroxylase OS=Phaseolus vulgaris E-value=0; Cinnamate 4-hydroxylase, putative OS=Ricinus communis E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; ] 
Glyma14g38580.1 505  
Chr.  : Gm14
From  : 47721318
To    : 47725350
Strand: +
 Gma.3881.2.S1_at; Gma.3881.2.S1_x_at Top 5 Hits: [ Coumarate 4-hydroxylase OS=Glycine max E-value=0; C4H OS=Glycine max E-value=0; Cinnamic acid 4-hydroxylase OS=Solanum tuberosum E-value=0; Cinnamate-4-hydroxylase OS=Rubus occidentalis E-value=0; Candidate cinnamic acid 4-hydroxylase OS=Capsicum annuum E-value=0; ] 
Glyma20g24810.1 539  
Chr.  : Gm20
From  : 34452632
To    : 34454910
Strand: -
 GmaAffx.18523.1.S1_at; GmaAffx.90135.1.S1_s_at; GmaAffx.93214.1.S1_at Top 5 Hits: [ Cinnamate 4-hydroxylase OS=Phaseolus vulgaris E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase, putative OS=Ricinus communis E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; ] 

Lotus japonicus
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
chr5.LjT24B10.30.nc 530  
N/A
 N/A Top 5 Hits: [ Cinnamate 4-hydroxylase OS=Phaseolus vulgaris E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase, putative OS=Ricinus communis E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; ] 
LjSGA_082453.1 232  
N/A
 N/A Top 5 Hits: [ Cinnamate-4-hydroxylase OS=Canarium album E-value=2e-88; Trans-cinnamate 4-hydroxylase OS=Populus tremuloides E-value=7e-88; Trans-cinnamate 4-hydroxylase OS=Populus tremuloides E-value=7e-88; Cytochrome P450 OS=Populus trichocarpa E-value=1e-87; Cinnamic acid 4-hydroxylase (Fragment) OS=Populus kitakamiensis E-value=1e-87; ] 
LjSGA_003295.2 529  
N/A
 N/A Top 5 Hits: [ Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase OS=Phaseolus vulgaris E-value=0; Cinnamate 4-hydroxylase, putative OS=Ricinus communis E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; ] 
LjSGA_029001.1 221  
N/A
 N/A Top 5 Hits: [ Cinnamate-4-hydroxylase OS=Gossypium arboreum E-value=0; Coumarate 4-hydroxylase OS=Glycine max E-value=0; C4H OS=Glycine max E-value=0; Cinnamate 4-hydroxylase OS=Populus trichocarpa x Populus deltoides E-value=0; Cytochrome P450 cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; ] 

Medicago truncatula (Barrel medic)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
IMGA|AC233660_7.1 537  
Chr.  : mth2-c161
From  : 34943
To    : 37165
Strand: -
 N/A Top 5 Hits: [ Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; Cinnamate 4-hydroxylase OS=Phaseolus vulgaris E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; ] 

Oryza sativa (Rice)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
LOC_Os01g60450.1 481  
Chr.  : Chr1
From  : 34960933
To    : 34962599
Strand: -
 OsAffx.2373.1.S1_at; OsAffx.2373.1.S1_x_at Top 5 Hits: [ Cinnamate-4-hydroxylase OS=Canarium album E-value=0; Cinnamate-4-hydroxylase OS=Gossypium arboreum E-value=0; Cinnamic acid 4-hydroxylase OS=Lithospermum erythrorhizon E-value=0; Cinnamic acid 4-hydroxylase OS=Humulus lupulus E-value=0; Cinnamate 4-hydroxylase OS=Populus trichocarpa x Populus deltoides E-value=0; ] 
LOC_Os02g26770.1 533  
Chr.  : Chr2
From  : 15710955
To    : 15712987
Strand: -
 N/A Top 5 Hits: [ Os02g0467000 protein OS=Oryza sativa subsp. japonica E-value=0; Os02g0467600 protein OS=Oryza sativa subsp. japonica E-value=0; Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; ] 
LOC_Os02g26810.1 533  
Chr.  : Chr2
From  : 15728953
To    : 15731064
Strand: +
 Os.11417.1.S1_at Top 5 Hits: [ Os02g0467600 protein OS=Oryza sativa subsp. japonica E-value=0; Os02g0467000 protein OS=Oryza sativa subsp. japonica E-value=0; Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; ] 
LOC_Os05g25640.1 500  
Chr.  : Chr5
From  : 14842530
To    : 14847089
Strand: -
 N/A Top 5 Hits: [ Os05g0320700 protein OS=Oryza sativa subsp. japonica E-value=0; Cytochrome P450 OS=Triticum aestivum E-value=0; Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Cinnamic acid 4-hydroxylase (Fragment) OS=Phyllostachys edulis E-value=0; Cinnamate-4-hydroxylase OS=Canarium album E-value=0; ] 

Physcomitrella patens (Moss)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Phypa1_1|150408| e_gw1.315.25.1 497  
N/A
 N/A Top 5 Hits: [ Cinnamic acid 4-hydroxylase OS=Ginkgo biloba E-value=0; Cinnamate-4-hydroxylase OS=Rubus occidentalis E-value=0; Cinnamate-4-hydroxylase OS=Rubus sp. SSL-2007 E-value=0; Cinnamic acid 4-hydroxylase OS=Humulus lupulus E-value=0; Cinnamate-4-hydroxylase OS=Rubus coreanus E-value=0; ] 
jgi|Phypa1_1|149501| e_gw1.298.22.1 503  
N/A
 N/A Top 5 Hits: [ Cinnamate 4-hydroxylase OS=Populus trichocarpa x Populus deltoides E-value=0; Cytochrome P450 cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Trans-cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Cinnamic acid hydroxylase OS=Malus domestica E-value=0; Cinnamate-4-hydroxylase OS=Rubus occidentalis E-value=0; ] 
jgi|Phypa1_1|140533| e_gw1.168.38.1 501  
N/A
 N/A Top 5 Hits: [ Cinnamic acid 4-hydroxylase OS=Ginkgo biloba E-value=0; Cinnamate 4-hydroxylase OS=Populus trichocarpa x Populus deltoides E-value=0; Cytochrome P450 cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Trans-cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Trans-cinnamate 4-hydroxylase OS=Pinus taeda E-value=0; ] 

Populus trichocarpa (Black cottonwood)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Poptr1|571917|eu gene3.00131281 505  
N/A
 N/A Top 5 Hits: [ Cytochrome P450 cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase OS=Populus trichocarpa x Populus deltoides E-value=0; Trans-cinnamate 4-hydroxylase OS=Populus trichocarpa E-value=0; Trans-cinnamate 4-hydroxylase OS=Populus tremuloides E-value=0; Trans-cinnamate 4-hydroxylase OS=Populus tremuloides E-value=0; ]  ABF69101.1 Hayakawa et al.,2006

Sorghum bicolor (Sorghum)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
jgi|Sorbi1|4803776|e _gw1.3.18545.1 505  
N/A
 N/A Top 5 Hits: [ Cinnamic acid 4-hydroxylase OS=Lithospermum erythrorhizon E-value=0; Cinnamate-4-hydroxylase OS=Gossypium arboreum E-value=0; CYP73A47v3 OS=Nicotiana tabacum E-value=0; CYP73A47v1 OS=Nicotiana tabacum E-value=0; Cinnamic acid 4-hydroxylase OS=Solanum tuberosum E-value=0; ] 
jgi|Sorbi1|4873945|e stExt_Genewise1Plus. C_chr_22520 501  
N/A
 N/A Top 5 Hits: [ Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Os05g0320700 protein OS=Oryza sativa subsp. japonica E-value=0; Cytochrome P450 OS=Triticum aestivum E-value=0; Cinnamic acid 4-hydroxylase (Fragment) OS=Phyllostachys edulis E-value=0; Cinnamate-4-hydroxylase OS=Parthenocissus henryana E-value=0; ] 
jgi|Sorbi1|4882955|e stExt_Genewise1Plus. C_chr_44973 530  
N/A
 N/A Top 5 Hits: [ Os02g0467600 protein OS=Oryza sativa subsp. japonica E-value=0; Os02g0467000 protein OS=Oryza sativa subsp. japonica E-value=0; Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; ] 

Vitis vinifera (Wine grape)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
GSVIVP00007155001 534  
N/A
 N/A Top 5 Hits: [ Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; Cinnamate 4-hydroxylase, putative OS=Ricinus communis E-value=0; ] 
GSVIVP00017017001 532  
N/A
 N/A Top 5 Hits: [ Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; Cinnamate 4-hydroxylase CYP73 OS=Citrus sinensis E-value=0; Elicitor-inducible cytochrome P450 OS=Nicotiana tabacum E-value=0; Cinnamate 4-hydroxylase OS=Phaseolus vulgaris E-value=0; ] 
GSVIVP00023932001 505  
N/A
 N/A Top 5 Hits: [ Cinnamate-4-hydroxylase OS=Parthenocissus henryana E-value=0; Cinnamate-4-hydroxylase OS=Gossypium arboreum E-value=0; Cinnamate-4-hydroxylase OS=Camptotheca acuminata E-value=0; Cinnamate-4-hydroxylase OS=Rubus occidentalis E-value=0; Cinnamate-4-hydroxylase OS=Canarium album E-value=0; ] 

Zea mays (Maize)
Seq ID Length Coordinates AffyProbes Description NCBI Protein Literature
GRMZM2G010468_P01 505  
N/A
 N/A Top 5 Hits: [ Cinnamate-4-hydroxylase OS=Gossypium arboreum E-value=0; Cinnamate 4-hydroxylase, putative OS=Ricinus communis E-value=0; Cinnamate 4-hydroxylase OS=Citrus paradisi E-value=0; Cinnamic acid 4-hydroxylase OS=Lithospermum erythrorhizon E-value=0; Cinnamate-4-hydroxylase OS=Cucumis sativus E-value=0; ] 
GRMZM2G028677_P01 531  
N/A
 N/A Top 5 Hits: [ Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Os02g0467600 protein OS=Oryza sativa subsp. japonica E-value=0; Os02g0467000 protein OS=Oryza sativa subsp. japonica E-value=0; Trans-cinnamate 4-monooxygenase OS=Populus trichocarpa E-value=0; Cinnamate 4-hydroxylase, putative OS=Ricinus communis E-value=0; ] 
GRMZM2G139874_P01 501  
N/A
 N/A Top 5 Hits: [ Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Os05g0320700 protein OS=Oryza sativa subsp. japonica E-value=0; Cytochrome P450 OS=Triticum aestivum E-value=0; Cinnamic acid 4-hydroxylase (Fragment) OS=Phyllostachys edulis E-value=0; Cinnamate-4-hydroxylase OS=Parthenocissus henryana E-value=0; ] 
GRMZM2G147245_P01 502  
N/A
 N/A Top 5 Hits: [ Trans-cinnamate 4-monooxygenase OS=Zea mays E-value=0; Os05g0320700 protein OS=Oryza sativa subsp. japonica E-value=0; Cytochrome P450 OS=Triticum aestivum E-value=0; Cinnamic acid 4-hydroxylase (Fragment) OS=Phyllostachys edulis E-value=0; Cinnamate-4-hydroxylase OS=Parthenocissus henryana E-value=0; ] 


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