Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AMSH3
Type: Protein GRN ID: np33476 Name: AMSH3
Annotation: AMSH3 | associated molecule with the SH3 domain of STAM 3 [EC:3.1.2.15]
Gene Locus: AT4G16144
Gene Expression (Affy ATH1 probeset):
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AMSH3  --  has product (in catalytic reaction)  --  Thiol
3 AMSH3  --  interacts with  --  VPS2.1
4 AMSH3  --  interacts with  --  VPS24.1
5 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU39; TGG3
6 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  Thioglucoside
7 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  tgg1/myrosinase 1
8 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  tgg2/myrosinase 2
9 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU36
10 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU35; TGG5
11 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU34; TGG4
12 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP17
13 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP23
14 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP21
15 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP8
16 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP22
17 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AtUBP12; UBP12
18 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP3; UBP3
19 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP27
20 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP18
21 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP24
22 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP16
23 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP20
24 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP10
25 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP9
26 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP26; SUP32; UBP26
27 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP7
28 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP14; PER1; TTN6; UBP14
29 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP25
30 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AtUBP13; UBP13
31 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP5; PDE323; UBP5
32 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP1; UBP1
33 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  OTLD1
34 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP19
35 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP4; UBP4
36 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP11
37 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP15
38 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AMSH2
39 AMSH3  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP2; UBP2
40 AMSH3  --  interacts with  --  VPS2.1  --  interacts with  --  AMSH1
41 AMSH3  --  interacts with  --  VPS2.1  --  interacts with  --  VPS2.2
42 AMSH3  --  interacts with  --  VPS2.1  --  interacts with  --  ATSKD1; SKD1; VPS4
43 AMSH3  --  interacts with  --  VPS2.1  --  interacts with  --  AT5G04920
44 AMSH3  --  interacts with  --  VPS2.1  --  interacts with  --  VPS37-1
45 AMSH3  --  interacts with  --  VPS2.1  --  interacts with  --  VPS28-1; VPS28-2
46 AMSH3  --  interacts with  --  VPS2.1  --  interacts with  --  ELC-Like
47 AMSH3  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.908881) with  --  OBE1
48 AMSH3  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.823499) with  --  AT3G01430
49 AMSH3  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.813189) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B
50 AMSH3  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.856978) with  --  SNF7.1
51 AMSH3  --  interacts with  --  VPS2.1  --  has similar expression pattern (mutual information value=0.880676) with  --  ATEXO70B1; EXO70B1
52 AMSH3  --  interacts with  --  VPS24.1  --  interacts with  --  VPS60.2
53 AMSH3  --  interacts with  --  VPS24.1  --  interacts with  --  VPS20.1
54 AMSH3  --  interacts with  --  VPS24.1  --  interacts with  --  VPS20.2
55 AMSH3  --  interacts with  --  VPS24.1  --  has similar expression pattern (mutual information value=0.812704) with  --  AT1G61150
56 AMSH3  --  interacts with  --  VPS24.1  --  has similar expression pattern (mutual information value=0.918988) with  --  AT5G03440
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab