Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node TOM20-4
Type: Protein GRN ID: np38461 Name: TOM20-4
Annotation: TOM20-4 | translocase of outer membrane 20-4 [TCDB:4.C.1.1]
Gene Locus: AT5G40930
Gene Expression (Affy ATH1 probeset): 249322_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 TOM20-4  --  interacts with  --  AT2G46550
3 TOM20-4  --  interacts with  --  AT2G27940
4 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  ATPPT2; PPT2
5 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  AT5G18150
6 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  AT5G51010
7 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  ATCIPK14; ATSR1; CIPK14; PKS24; SnRK3.15; SR1
8 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  AtMYB6; MYB6
9 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  ATG8F
10 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  AT1G54770
11 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  ATG8D
12 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  AT1G12650
13 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  AT2G45920
14 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  DRIP2
15 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  AT2G31040
16 TOM20-4  --  interacts with  --  AT2G46550  --  interacts with  --  CIPK22; SnRK3.19
17 TOM20-4  --  interacts with  --  AT2G46550  --  has similar expression pattern (mutual information value=0.829748) with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1
18 TOM20-4  --  interacts with  --  AT2G46550  --  has similar expression pattern (mutual information value=0.831221) with  --  AT2G04690
19 TOM20-4  --  interacts with  --  AT2G46550  --  has similar expression pattern (mutual information value=1.01265) with  --  AT3G47160
20 TOM20-4  --  interacts with  --  AT2G27940  --  interacts with  --  AT4G17430
21 TOM20-4  --  interacts with  --  AT2G27940  --  transport  --  Protein-cysteine
22 TOM20-4  --  interacts with  --  AT2G27940  --  transport  --  Bile salt
23 TOM20-4  --  interacts with  --  AT2G27940  --  transport  --  HCO3-
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab