Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ARP8; ARP8; ATARP8
Type: Protein GRN ID: np36226 Name: ARP8; ARP8; ATARP8
Annotation: ATARP8, ARP8 | actin-related protein 8
Gene Locus: AT5G56180
Gene Expression (Affy ATH1 probeset): 247997_at    248002_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F
3 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AT4G34660
4 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AtNBR1; NBR1
5 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AT5G40690
6 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AT5G07730
7 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AT4G00355
8 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  APG7; ATAPG7; ATATG7; ATG7
9 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  ATATG3; ATG3
10 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  CDC48B
11 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AT2G35900
12 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AT2G46550
13 ARP8; ARP8; ATARP8  --  has similar expression pattern (mutual information value=0.828325) with  --  ATG8F  --  interacts with  --  AT4G15930
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact