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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G06980
Type: Protein GRN ID: np23962 Name:
Annotation: DEA(D/H)-box RNA helicase family protein [TCDB:1.F.1.1] [TCDB:3.A.16.1] [TCDB:9.A.5.1] [EC:3.6.4.13]
Gene Locus: AT3G06980
Gene Expression (Affy ATH1 probeset): 258554_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G06980  --  interacts with  --  AT5G19960
3 AT3G06980  --  interacts with  --  AT3G11590
4 AT3G06980  --  interacts with  --  AT1G30860
5 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6
6 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150
7 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2
8 AT3G06980  --  has similar expression pattern (mutual information value=0.868851) with  --  PDE327
9 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191
10 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390
11 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  AT5G56220
12 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  AT5G65683
13 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  ATU2AF35B; U2AF35B
14 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  AT5G05190
15 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
16 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  IMPA-2
17 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  AT2G32650
18 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  ATMAP70-5; MAP70-5
19 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  AT2G43370
20 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  HAP1; MAGO; MEE63
21 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  AT1G49850
22 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  AT4G20300
23 AT3G06980  --  interacts with  --  AT5G19960  --  interacts with  --  ARR14
24 AT3G06980  --  interacts with  --  AT5G19960  --  has similar expression pattern (mutual information value=0.817382) with  --  AT5G60430
25 AT3G06980  --  interacts with  --  AT5G19960  --  has similar expression pattern (mutual information value=0.817382) with  --  PRORP2
26 AT3G06980  --  interacts with  --  AT5G19960  --  has similar expression pattern (mutual information value=1.02797) with  --  AT5G53800
27 AT3G06980  --  interacts with  --  AT5G19960  --  has similar expression pattern (mutual information value=1.00624) with  --  AT1G48900
28 AT3G06980  --  interacts with  --  AT5G19960  --  has similar expression pattern (mutual information value=0.840902) with  --  AT5G16950
29 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT5G20030
30 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G50910
31 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G56680
32 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G17740
33 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  LSU2
34 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT4G15730
35 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G27960
36 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  HDG4
37 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AME3
38 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT5G58950
39 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  ASIL1
40 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  ATSK41; SK41
41 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G48280
42 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT2G19650
43 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G31870
44 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G12650
45 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G01630
46 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT1G80000
47 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AtMYB70; MYB70
48 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  RCN1 ATB BETA BETA
49 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AtPPR2; EMB2750; PPR2
50 AT3G06980  --  interacts with  --  AT3G11590  --  interacts with  --  AT3G01690
51 AT3G06980  --  interacts with  --  AT3G11590  --  has similar expression pattern (mutual information value=0.870626) with  --  AT3G16060
52 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT4G28230
53 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT5G38220
54 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT5G22890
55 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT1G53800
56 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  ACT7
57 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT3G24740
58 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT1G54770
59 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  ATSOS2; CIPK24; SNRK3.11; SOS2
60 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  ATBPM3; BPM3
61 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  EIF2 BETA; EMB1401
62 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  CIPK22; SnRK3.19
63 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT3G19120
64 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT5G58530
65 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT5G22310
66 AT3G06980  --  interacts with  --  AT1G30860  --  interacts with  --  AT1G19980
67 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.08843) with  --  ABC1; ATSIG1; ATSIG2; SIG1; SIG2; SIGA; SIGB
68 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.0558) with  --  emb2394
69 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=0.860156) with  --  ATCAF2; CAF2
70 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.00166) with  --  AT1G73110
71 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.05888) with  --  LPA3
72 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.061) with  --  AT1G49975
73 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=0.897123) with  --  AT1G68520
74 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.1932) with  --  AT1G18170
75 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=0.967144) with  --  AT3G60370
76 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.12033) with  --  AT5G51110
77 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=1.00862) with  --  AT5G65220
78 AT3G06980  --  has similar expression pattern (mutual information value=0.816504) with  --  CRR6  --  has similar expression pattern (mutual information value=0.910025) with  --  pal3
79 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
80 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.962582) with  --  AT1G22700
81 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.873863) with  --  ATTOC33; PPI1; TOC33
82 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=1.00151) with  --  AT1G11430
83 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.898126) with  --  AT1G01320
84 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.885139) with  --  PDE326; PNP; RIF10
85 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=1.06798) with  --  AT3G20230
86 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=1.03462) with  --  DAL; DAL1
87 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.933667) with  --  ATS2; EMB1995; LPAT1
88 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=1.09022) with  --  CP29
89 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=1.0232) with  --  AtcpRRF; cpRRF; HFP108; RRF
90 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.879039) with  --  AT5G06130
91 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.887624) with  --  AT5G35210
92 AT3G06980  --  has similar expression pattern (mutual information value=1.00456) with  --  AT1G02150  --  has similar expression pattern (mutual information value=0.887624) with  --  EGY1
93 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.15819) with  --  AT2G35410
94 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.04787) with  --  ABC4
95 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.131) with  --  AT1G05140
96 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.04608) with  --  FUG1
97 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.10184) with  --  EMB3105
98 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.998659) with  --  PDE318
99 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.979349) with  --  AT1G01970
100 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.22123) with  --  AT1G14270
101 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.01175) with  --  AT1G12800
102 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.00737) with  --  AT3G07670
103 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.26303) with  --  AT3G01660
104 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.06678) with  --  AT3G04760
105 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.14607) with  --  AT3G09580
106 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.938574) with  --  AT3G02690
107 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.01824) with  --  AT3G02450
108 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.20937) with  --  AT3G29185
109 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.10432) with  --  FdC1
110 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.940553) with  --  AT3G10970
111 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.956409) with  --  ANTR2; PHT4;4
112 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.911828) with  --  ATSS4; SS4; SSIV
113 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.24663) with  --  NARA5
114 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.14877) with  --  PGR3
115 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.03917) with  --  MRL1; PDE346
116 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.04499) with  --  AT4G35760
117 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.22672) with  --  AT3G56650
118 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.925093) with  --  AT5G02710
119 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.873747) with  --  AT5G03900
120 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=0.903139) with  --  AT5G42310
121 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.10679) with  --  crr1
122 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.05192) with  --  AT5G52960
123 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.08661) with  --  AtTic20-V; Tic20-V
124 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.05047) with  --  APO2; emb1629
125 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.1549) with  --  LHCA5
126 AT3G06980  --  has similar expression pattern (mutual information value=0.855203) with  --  ATAB2  --  has similar expression pattern (mutual information value=1.0347) with  --  FdC2
127 AT3G06980  --  has similar expression pattern (mutual information value=0.868851) with  --  PDE327  --  has similar expression pattern (mutual information value=0.816206) with  --  PFC1
128 AT3G06980  --  has similar expression pattern (mutual information value=0.868851) with  --  PDE327  --  has similar expression pattern (mutual information value=0.909559) with  --  ATRAB1A; ATRABD2B; RAB1A
129 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=0.980848) with  --  SCY1
130 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=0.800377) with  --  EMB3114
131 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.03817) with  --  AT1G14030
132 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=0.842349) with  --  PDE343; PTAC2
133 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.09701) with  --  AT1G01080
134 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.08144) with  --  AT3G08740
135 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.06029) with  --  AT3G12930
136 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=0.990232) with  --  FLU
137 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.07517) with  --  PTAC14
138 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.13249) with  --  AT4G24750
139 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.07652) with  --  AT4G26370
140 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=0.821004) with  --  AT5G48630
141 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.00972) with  --  EMB3143
142 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=1.03146) with  --  RPL9
143 AT3G06980  --  has similar expression pattern (mutual information value=0.981572) with  --  pde191  --  has similar expression pattern (mutual information value=0.841652) with  --  AT4G17810
144 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.27414) with  --  CJD1
145 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.1522) with  --  AT1G70200
146 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390  --  has similar expression pattern (mutual information value=0.907209) with  --  AT2G17033
147 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.14791) with  --  CLPP6; NCLPP1; NCLPP6
148 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.24516) with  --  emb2726
149 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.02544) with  --  AT3G59040
150 AT3G06980  --  has similar expression pattern (mutual information value=0.956515) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.17508) with  --  EMB3126
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