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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G19090
Type: Protein GRN ID: np28533 Name:
Annotation: RNA-binding protein
Gene Locus: AT3G19090
Gene Expression (Affy ATH1 probeset): 256638_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2
3 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550
4 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810
5 AT3G19090  --  has similar expression pattern (mutual information value=0.888195) with  --  AT3G27590
6 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260
7 AT3G19090  --  has similar expression pattern (mutual information value=0.835726) with  --  AT3G42140
8 AT3G19090  --  has similar expression pattern (mutual information value=0.824104) with  --  ASD2; ATASD2
9 AT3G19090  --  has similar expression pattern (mutual information value=0.923951) with  --  AT5G27510
10 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2  --  interacts with  --  AT2G43970
11 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2  --  interacts with  --  ATRBP37; CID12; RBP37
12 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2  --  interacts with  --  CID8
13 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2  --  interacts with  --  CID7
14 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2  --  interacts with  --  CID1; ERD15; LSR1
15 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2  --  interacts with  --  AT4G14270
16 AT3G19090  --  interacts with  --  ATPAB2; PAB2; PABP2  --  interacts with  --  AT1G80000
17 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.881347) with  --  AT2G02515
18 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.91616) with  --  AT2G06820
19 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.811192) with  --  AT2G12050
20 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.811192) with  --  AT3G31908
21 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.811192) with  --  AT3G32377
22 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.83633) with  --  AT2G11010
23 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.92877) with  --  AT1G31100
24 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.970914) with  --  AT2G16410
25 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.874768) with  --  AT2G20460
26 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.940926) with  --  AT1G36150
27 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.904531) with  --  AT1G72460
28 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.834496) with  --  AT3G30280
29 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=1.07802) with  --  sks10
30 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.800798) with  --  AT3G42300
31 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.877265) with  --  AT3G42820
32 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.970535) with  --  AT3G42770
33 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.851442) with  --  AT5G41720
34 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.865006) with  --  AT5G53635
35 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.838963) with  --  AT5G66220
36 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.893527) with  --  AT5G26640
37 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.849338) with  --  AT5G20370
38 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.968075) with  --  AT1G38149
39 AT3G19090  --  has similar expression pattern (mutual information value=0.876612) with  --  AT1G09550  --  has similar expression pattern (mutual information value=0.968075) with  --  AT1G38340
40 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.810541) with  --  AtRLP24; RLP24
41 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.818814) with  --  COBL6
42 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.80646) with  --  AT2G36920
43 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.816204) with  --  AT2G16110
44 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G63540
45 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.825553) with  --  ATDGK6; DGK6
46 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.841294) with  --  A7; ATA7
47 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.897898) with  --  AtPP2-B12; PP2-B12
48 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.815448) with  --  AT5G20760
49 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.82139) with  --  AT1G56675
50 AT3G19090  --  has similar expression pattern (mutual information value=0.826127) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.82139) with  --  AT4G09146
51 AT3G19090  --  has similar expression pattern (mutual information value=0.888195) with  --  AT3G27590  --  has similar expression pattern (mutual information value=0.849936) with  --  AAP8; ATAAP8
52 AT3G19090  --  has similar expression pattern (mutual information value=0.888195) with  --  AT3G27590  --  has similar expression pattern (mutual information value=0.804316) with  --  AT2G29860
53 AT3G19090  --  has similar expression pattern (mutual information value=0.888195) with  --  AT3G27590  --  has similar expression pattern (mutual information value=1.04291) with  --  AT5G54220
54 AT3G19090  --  has similar expression pattern (mutual information value=0.888195) with  --  AT3G27590  --  has similar expression pattern (mutual information value=0.838361) with  --  AT5G65130
55 AT3G19090  --  has similar expression pattern (mutual information value=0.888195) with  --  AT3G27590  --  has similar expression pattern (mutual information value=1.02611) with  --  AT5G19810
56 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.919411) with  --  CYP76C3
57 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.00052) with  --  AT2G22950
58 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.01293) with  --  AT2G18590
59 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.929902) with  --  AT2G25565
60 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.11393) with  --  AT2G15870
61 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.896621) with  --  AT1G24640
62 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.802602) with  --  AT1G62210
63 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.01567) with  --  AT2G13510
64 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.01889) with  --  AT2G05370
65 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.877215) with  --  AT1G43630
66 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.877122) with  --  KOM
67 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.914008) with  --  AT1G74990
68 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.05369) with  --  AT1G35617
69 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.951017) with  --  AT1G34440
70 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.857614) with  --  AT1G43760
71 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.930696) with  --  AtMYB113; MYB113
72 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.837888) with  --  AT1G72131
73 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.802835) with  --  GLIP6
74 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.82111) with  --  AT1G28030
75 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.02415) with  --  AT3G26614
76 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.841538) with  --  AT3G11060
77 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.805624) with  --  AT5G28600
78 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.933136) with  --  AT5G28590
79 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.873764) with  --  ATTIP1.3; GAMMA-TIP3; TIP1;3
80 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.846102) with  --  AT4G04120
81 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.898392) with  --  AT4G04690
82 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.859358) with  --  AT4G33830
83 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.859358) with  --  AT4G33840
84 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.09931) with  --  AT3G49480
85 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.02639) with  --  AT3G59845
86 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.906073) with  --  AT5G18880
87 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.851161) with  --  AT5G37170
88 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.04353) with  --  AT5G43800
89 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.845662) with  --  AT5G46140
90 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.88894) with  --  AT5G48210
91 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.824744) with  --  AT5G55650
92 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=1.04851) with  --  AT4G17580
93 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.822415) with  --  HDG4
94 AT3G19090  --  has similar expression pattern (mutual information value=0.87069) with  --  AT2G33260  --  has similar expression pattern (mutual information value=0.962902) with  --  AT4G14815
95 AT3G19090  --  has similar expression pattern (mutual information value=0.835726) with  --  AT3G42140  --  has similar expression pattern (mutual information value=0.903467) with  --  AT2G10740
96 AT3G19090  --  has similar expression pattern (mutual information value=0.835726) with  --  AT3G42140  --  has similar expression pattern (mutual information value=0.886542) with  --  AT3G25720
97 AT3G19090  --  has similar expression pattern (mutual information value=0.835726) with  --  AT3G42140  --  has similar expression pattern (mutual information value=0.950858) with  --  AT1G42650
98 AT3G19090  --  has similar expression pattern (mutual information value=0.835726) with  --  AT3G42140  --  has similar expression pattern (mutual information value=0.812423) with  --  SVL4
99 AT3G19090  --  has similar expression pattern (mutual information value=0.824104) with  --  ASD2; ATASD2  --  has similar expression pattern (mutual information value=0.814063) with  --  AT1G64250
100 AT3G19090  --  has similar expression pattern (mutual information value=0.824104) with  --  ASD2; ATASD2  --  has similar expression pattern (mutual information value=0.8505) with  --  AT3G30250
101 AT3G19090  --  has similar expression pattern (mutual information value=0.923951) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.877838) with  --  AT2G14595
102 AT3G19090  --  has similar expression pattern (mutual information value=0.923951) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.865575) with  --  AT2G01240
103 AT3G19090  --  has similar expression pattern (mutual information value=0.923951) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.848839) with  --  AGL5; SHP2
104 AT3G19090  --  has similar expression pattern (mutual information value=0.923951) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.826928) with  --  AT3G59610
105 AT3G19090  --  has similar expression pattern (mutual information value=0.923951) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.872935) with  --  AT5G10420
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