Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G01240
Type: Protein GRN ID: np21178 Name:
Annotation: Reticulon family protein
Gene Locus: AT2G01240
Gene Expression (Affy ATH1 probeset): 265762_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G01240  --  has similar expression pattern (mutual information value=0.843268) with  --  AT2G14595
3 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740
4 AT2G01240  --  has similar expression pattern (mutual information value=0.802351) with  --  AT1G41860
5 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10
6 AT2G01240  --  has similar expression pattern (mutual information value=0.890365) with  --  HDG9
7 AT2G01240  --  has similar expression pattern (mutual information value=0.818898) with  --  AT5G53635
8 AT2G01240  --  has similar expression pattern (mutual information value=0.865575) with  --  AT5G27510
9 AT2G01240  --  has similar expression pattern (mutual information value=0.893838) with  --  AT5G20760
10 AT2G01240  --  has similar expression pattern (mutual information value=0.843268) with  --  AT2G14595  --  has similar expression pattern (mutual information value=0.805828) with  --  AT2G18820
11 AT2G01240  --  has similar expression pattern (mutual information value=0.843268) with  --  AT2G14595  --  has similar expression pattern (mutual information value=0.816052) with  --  AT2G16110
12 AT2G01240  --  has similar expression pattern (mutual information value=0.843268) with  --  AT2G14595  --  has similar expression pattern (mutual information value=0.808032) with  --  AT3G25720
13 AT2G01240  --  has similar expression pattern (mutual information value=0.843268) with  --  AT2G14595  --  is the target gene of  --  ath-miR779.1
14 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=1.04975) with  --  AT2G06820
15 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.80681) with  --  ATCKX2
16 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=1.01849) with  --  AT1G42650
17 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.815774) with  --  ATTPS4; TPS4
18 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.903467) with  --  AT3G42140
19 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.815531) with  --  AT3G43170
20 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.802429) with  --  AT3G44070
21 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.872591) with  --  AT5G40050
22 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=1.07341) with  --  AT5G43800
23 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=1.15169) with  --  AT5G54220
24 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.860184) with  --  AT5G59170
25 AT2G01240  --  has similar expression pattern (mutual information value=0.903861) with  --  AT2G10740  --  has similar expression pattern (mutual information value=0.875521) with  --  ASD2; ATASD2
26 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.900344) with  --  LBD10
27 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=1.07802) with  --  AT1G09550
28 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=1.02626) with  --  AT2G16410
29 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.845855) with  --  AT2G20460
30 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.900378) with  --  AT1G64250
31 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=1.05413) with  --  AT1G53810
32 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.836033) with  --  KOM
33 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.921945) with  --  AT1G36970
34 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=1.00703) with  --  AT1G34440
35 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.866615) with  --  AT1G72460
36 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.872782) with  --  AT3G04170
37 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=1.12183) with  --  AT3G27590
38 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.802503) with  --  AT3G13420
39 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.802384) with  --  AT5G28600
40 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=1.05543) with  --  AT2G33260
41 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.925019) with  --  AT4G08380
42 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.817593) with  --  AT3G48830
43 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.800408) with  --  GolS10
44 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.871555) with  --  AT5G20370
45 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=1.11115) with  --  AT5G19810
46 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.867416) with  --  AT4G14815
47 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.922502) with  --  AT1G38149
48 AT2G01240  --  has similar expression pattern (mutual information value=0.936414) with  --  sks10  --  has similar expression pattern (mutual information value=0.922502) with  --  AT1G38340
49 AT2G01240  --  has similar expression pattern (mutual information value=0.818898) with  --  AT5G53635  --  has similar expression pattern (mutual information value=0.801591) with  --  AtRLP24; RLP24
50 AT2G01240  --  has similar expression pattern (mutual information value=0.818898) with  --  AT5G53635  --  has similar expression pattern (mutual information value=0.8097) with  --  AAP8; ATAAP8
51 AT2G01240  --  has similar expression pattern (mutual information value=0.818898) with  --  AT5G53635  --  has similar expression pattern (mutual information value=0.807277) with  --  AT5G24480
52 AT2G01240  --  has similar expression pattern (mutual information value=0.818898) with  --  AT5G53635  --  has similar expression pattern (mutual information value=0.818864) with  --  AT5G26640
53 AT2G01240  --  has similar expression pattern (mutual information value=0.865575) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.848839) with  --  AGL5; SHP2
54 AT2G01240  --  has similar expression pattern (mutual information value=0.865575) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.923951) with  --  AT3G19090
55 AT2G01240  --  has similar expression pattern (mutual information value=0.865575) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.826928) with  --  AT3G59610
56 AT2G01240  --  has similar expression pattern (mutual information value=0.865575) with  --  AT5G27510  --  has similar expression pattern (mutual information value=0.872935) with  --  AT5G10420
57 AT2G01240  --  has similar expression pattern (mutual information value=0.893838) with  --  AT5G20760  --  has similar expression pattern (mutual information value=0.896217) with  --  AT2G07070
58 AT2G01240  --  has similar expression pattern (mutual information value=0.893838) with  --  AT5G20760  --  has similar expression pattern (mutual information value=0.87121) with  --  AT2G25565
59 AT2G01240  --  has similar expression pattern (mutual information value=0.893838) with  --  AT5G20760  --  has similar expression pattern (mutual information value=0.834848) with  --  AT1G24640
60 AT2G01240  --  has similar expression pattern (mutual information value=0.893838) with  --  AT5G20760  --  has similar expression pattern (mutual information value=0.825891) with  --  AT5G28550
61 AT2G01240  --  has similar expression pattern (mutual information value=0.893838) with  --  AT5G20760  --  has similar expression pattern (mutual information value=0.820322) with  --  AT4G03950
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact