Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G63540
Type: Protein GRN ID: np11293 Name:
Annotation: hydroxyproline-rich glycoprotein family protein [TCDB:2.A.4.1] [TCDB:2.A.4.3] [TCDB:2.A.5.1]
Gene Locus: AT1G63540
Gene Expression (Affy ATH1 probeset): 261544_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G63540  --  has similar expression pattern (mutual information value=0.828422) with  --  AT2G29780
3 AT1G63540  --  has similar expression pattern (mutual information value=0.845097) with  --  AT2G15750
4 AT1G63540  --  has similar expression pattern (mutual information value=0.810515) with  --  AT2G36920
5 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810
6 AT1G63540  --  has similar expression pattern (mutual information value=0.964472) with  --  KOM
7 AT1G63540  --  has similar expression pattern (mutual information value=0.831725) with  --  AT1G77655
8 AT1G63540  --  has similar expression pattern (mutual information value=0.84755) with  --  AT1G28030
9 AT1G63540  --  has similar expression pattern (mutual information value=0.8015) with  --  AT3G13420
10 AT1G63540  --  has similar expression pattern (mutual information value=0.831578) with  --  AT1G50910
11 AT1G63540  --  has similar expression pattern (mutual information value=0.84418) with  --  AT1G07060
12 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510
13 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT4G22450
14 AT1G63540  --  has similar expression pattern (mutual information value=0.808274) with  --  AT3G42920
15 AT1G63540  --  has similar expression pattern (mutual information value=0.922371) with  --  AT3G43500
16 AT1G63540  --  has similar expression pattern (mutual information value=0.841837) with  --  AT3G49770
17 AT1G63540  --  has similar expression pattern (mutual information value=0.863646) with  --  AT5G13350
18 AT1G63540  --  has similar expression pattern (mutual information value=0.889826) with  --  AT5G15360
19 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8
20 AT1G63540  --  has similar expression pattern (mutual information value=0.851313) with  --  AT5G56920
21 AT1G63540  --  has similar expression pattern (mutual information value=0.836163) with  --  AT5G25290
22 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640
23 AT1G63540  --  has similar expression pattern (mutual information value=0.828422) with  --  AT2G29780  --  has similar expression pattern (mutual information value=0.816981) with  --  AT2G16410
24 AT1G63540  --  has similar expression pattern (mutual information value=0.828422) with  --  AT2G29780  --  has similar expression pattern (mutual information value=0.809091) with  --  AT5G62800
25 AT1G63540  --  has similar expression pattern (mutual information value=0.845097) with  --  AT2G15750  --  has similar expression pattern (mutual information value=0.873802) with  --  AT1G32660
26 AT1G63540  --  has similar expression pattern (mutual information value=0.845097) with  --  AT2G15750  --  has similar expression pattern (mutual information value=0.929322) with  --  CYP724A1
27 AT1G63540  --  has similar expression pattern (mutual information value=0.845097) with  --  AT2G15750  --  has similar expression pattern (mutual information value=0.808871) with  --  AtZIP12; ZIP12
28 AT1G63540  --  has similar expression pattern (mutual information value=0.810515) with  --  AT2G36920  --  has similar expression pattern (mutual information value=0.822409) with  --  AT4G19240
29 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.810541) with  --  AtRLP24; RLP24
30 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.818814) with  --  COBL6
31 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.956163) with  --  AT1G09550
32 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.861305) with  --  AT2G20460
33 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.816204) with  --  AT2G16110
34 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.83372) with  --  AT1G72460
35 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.826127) with  --  AT3G19090
36 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=1.05233) with  --  AT2G33260
37 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.825553) with  --  ATDGK6; DGK6
38 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=1.05413) with  --  sks10
39 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.841294) with  --  A7; ATA7
40 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.85801) with  --  AT3G42140
41 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.897898) with  --  AtPP2-B12; PP2-B12
42 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.828951) with  --  AT5G41720
43 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.852985) with  --  AT5G53635
44 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.815448) with  --  AT5G20760
45 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.82139) with  --  AT1G56675
46 AT1G63540  --  has similar expression pattern (mutual information value=0.853238) with  --  AT1G53810  --  has similar expression pattern (mutual information value=0.82139) with  --  AT4G09146
47 AT1G63540  --  has similar expression pattern (mutual information value=0.964472) with  --  KOM  --  has similar expression pattern (mutual information value=0.824831) with  --  AT2G15870
48 AT1G63540  --  has similar expression pattern (mutual information value=0.964472) with  --  KOM  --  has similar expression pattern (mutual information value=0.861969) with  --  AT2G13510
49 AT1G63540  --  has similar expression pattern (mutual information value=0.964472) with  --  KOM  --  has similar expression pattern (mutual information value=0.865622) with  --  AT1G31100
50 AT1G63540  --  has similar expression pattern (mutual information value=0.964472) with  --  KOM  --  has similar expression pattern (mutual information value=0.88151) with  --  AT1G35617
51 AT1G63540  --  has similar expression pattern (mutual information value=0.964472) with  --  KOM  --  has similar expression pattern (mutual information value=0.908848) with  --  AT1G34440
52 AT1G63540  --  has similar expression pattern (mutual information value=0.964472) with  --  KOM  --  has similar expression pattern (mutual information value=0.818376) with  --  AT5G54350
53 AT1G63540  --  has similar expression pattern (mutual information value=0.831725) with  --  AT1G77655  --  interacts with  --  AT4G37445
54 AT1G63540  --  has similar expression pattern (mutual information value=0.831725) with  --  AT1G77655  --  interacts with  --  ATH3; ATTRX3; ATTRXH3; TRX3; TRXH3
55 AT1G63540  --  has similar expression pattern (mutual information value=0.84755) with  --  AT1G28030  --  has similar expression pattern (mutual information value=0.80607) with  --  AT2G18590
56 AT1G63540  --  has similar expression pattern (mutual information value=0.84418) with  --  AT1G07060  --  has similar expression pattern (mutual information value=0.816142) with  --  AT5G28570
57 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.854252) with  --  AT2G35590
58 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.817797) with  --  AT2G16680
59 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.813685) with  --  AT4G39753
60 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.853261) with  --  AT2G14130
61 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.853261) with  --  AT3G47260
62 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.853261) with  --  AT3G30440
63 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.807889) with  --  AT5G37383
64 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.807889) with  --  AT5G44416
65 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.807889) with  --  AT3G47310
66 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.807889) with  --  AT4G28970
67 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.807889) with  --  AT1G23920
68 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.807889) with  --  AT1G36090
69 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.807889) with  --  AT4G09380
70 AT1G63540  --  has similar expression pattern (mutual information value=0.811091) with  --  AT1G61510  --  has similar expression pattern (mutual information value=0.882228) with  --  AT5G34900
71 AT1G63540  --  has similar expression pattern (mutual information value=0.922371) with  --  AT3G43500  --  is the target gene of  --  ath-miR5998b
72 AT1G63540  --  has similar expression pattern (mutual information value=0.922371) with  --  AT3G43500  --  is the target gene of  --  ath-miR5998a
73 AT1G63540  --  has similar expression pattern (mutual information value=0.841837) with  --  AT3G49770  --  has similar expression pattern (mutual information value=0.812097) with  --  AT5G41660
74 AT1G63540  --  has similar expression pattern (mutual information value=0.889826) with  --  AT5G15360  --  has similar expression pattern (mutual information value=0.810042) with  --  AT5G24130
75 AT1G63540  --  has similar expression pattern (mutual information value=0.889826) with  --  AT5G15360  --  has similar expression pattern (mutual information value=0.808009) with  --  FAS2; MUB3.9; NFB01; NFB1
76 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET17; SWEET17
77 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET16; SWEET16
78 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET10; SWEET10
79 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET7; SWEET7
80 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET5; AtVEX1; SWEET5
81 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  BTI3; RTNLB4
82 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET13; SWEET13
83 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET11; SWEET11
84 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET9; SWEET9
85 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  interacts with  --  AtSWEET6; SWEET6
86 AT1G63540  --  has similar expression pattern (mutual information value=0.890331) with  --  AtSWEET8; SWEET8  --  has similar expression pattern (mutual information value=0.816937) with  --  HDG4
87 AT1G63540  --  has similar expression pattern (mutual information value=0.836163) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.912069) with  --  AtMYB104; MYB104
88 AT1G63540  --  has similar expression pattern (mutual information value=0.836163) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.942647) with  --  AT2G21930
89 AT1G63540  --  has similar expression pattern (mutual information value=0.836163) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.805515) with  --  AT1G47660
90 AT1G63540  --  has similar expression pattern (mutual information value=0.836163) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.807069) with  --  AT1G63200
91 AT1G63540  --  has similar expression pattern (mutual information value=0.836163) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.991457) with  --  AT4G29200
92 AT1G63540  --  has similar expression pattern (mutual information value=0.836163) with  --  AT5G25290  --  has similar expression pattern (mutual information value=0.978586) with  --  AT1G44510
93 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.806434) with  --  AT2G29600
94 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.861451) with  --  PAB3
95 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.874733) with  --  AT2G36550
96 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.841093) with  --  ATCHX6B; CHX6B
97 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.821291) with  --  AT3G22340
98 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.859525) with  --  AT3G25260
99 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.913564) with  --  AT3G22350
100 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.865081) with  --  AT3G42820
101 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.828536) with  --  AT3G44070
102 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.836567) with  --  AT1G38149
103 AT1G63540  --  has similar expression pattern (mutual information value=0.819388) with  --  AT5G26640  --  has similar expression pattern (mutual information value=0.836567) with  --  AT1G38340
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact