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Location:  Home > Details for node EMB2788
Type: Protein GRN ID: np35613 Name: EMB2788
Annotation: CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT4G27010
Gene Expression (Affy ATH1 probeset): 253942_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
3 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530
4 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3
5 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940
6 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810
7 EMB2788  --  has similar expression pattern (mutual information value=0.840935) with  --  NRPA1
8 EMB2788  --  has similar expression pattern (mutual information value=0.848157) with  --  LON1; LON_ARA_ARA
9 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.967772) with  --  ATKRS-1
10 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=1.06336) with  --  AT3G09720
11 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=1.02588) with  --  APUM24; PUM24
12 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=1.31309) with  --  HSP60-3A
13 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=1.01164) with  --  HSP60; HSP60-3B
14 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.810007) with  --  emb1796
15 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.836466) with  --  HD2C; HDT3
16 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.819566) with  --  ATMSL10; MSL10
17 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.834188) with  --  EMB3012
18 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.833288) with  --  NRPC2
19 EMB2788  --  has similar expression pattern (mutual information value=0.850109) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1  --  has similar expression pattern (mutual information value=0.834803) with  --  AT5G66540
20 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  AT3G24120
21 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  CSN6B
22 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  AT5G57910
23 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  AT5G03500
24 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  AT5G59210
25 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  AT4G27090
26 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  AT1G20770
27 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  EMB2819
28 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  interacts with  --  AT2G32980
29 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  has similar expression pattern (mutual information value=0.912936) with  --  AT2G18220
30 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  has similar expression pattern (mutual information value=1.10821) with  --  PPR596
31 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  has similar expression pattern (mutual information value=1.11364) with  --  ATHD2A; HD2A; HDA3; HDT1
32 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  has similar expression pattern (mutual information value=0.957246) with  --  AT5G06550
33 EMB2788  --  has similar expression pattern (mutual information value=0.92543) with  --  AT3G06530  --  has similar expression pattern (mutual information value=0.946596) with  --  AT5G14580
34 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.936025) with  --  ATPRMT1A; PRMT1A
35 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.965345) with  --  AT2G18330
36 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.00178) with  --  ATRRP4; RRP4
37 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.826816) with  --  AtELP2; ELP2
38 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.01928) with  --  MEE67
39 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.01928) with  --  AT1G18320
40 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.913109) with  --  AT1G53645
41 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.809328) with  --  NRPA2
42 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=1.04903) with  --  AAC42; ATRPAC42
43 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.888476) with  --  AT1G77550
44 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.90225) with  --  AT3G02650
45 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.93669) with  --  AtLa1; La1
46 EMB2788  --  has similar expression pattern (mutual information value=0.931773) with  --  ATPRMT3; PRMT3  --  has similar expression pattern (mutual information value=0.941088) with  --  RID2
47 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.09419) with  --  AT2G34260
48 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.904862) with  --  AT1G63250
49 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.904862) with  --  AT2G07750
50 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.10522) with  --  AT1G51380
51 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.87672) with  --  AT1G23280
52 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.04659) with  --  AT3G03920
53 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.987182) with  --  AT3G07750
54 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.834291) with  --  AT3G19440
55 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.11128) with  --  ATPHB4; PHB4
56 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.88678) with  --  AR192
57 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.12093) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
58 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.16727) with  --  RBL
59 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.09254) with  --  AT3G55605
60 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.0527) with  --  AT5G02050
61 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.995828) with  --  ATRH25; STRS2
62 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.956394) with  --  AT5G09840
63 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.15196) with  --  AT5G11240
64 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.810456) with  --  AT5G39840
65 EMB2788  --  has similar expression pattern (mutual information value=0.920035) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.00565) with  --  AT5G16930
66 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.800439) with  --  SCPL8; SNG1
67 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.03488) with  --  AT1G60770
68 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.13647) with  --  AT1G23100
69 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.14627) with  --  AT1G79470
70 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.874947) with  --  HCC1
71 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.23767) with  --  AT3G03060
72 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.84347) with  --  ATPRMT4B; PRMT4B
73 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.42589) with  --  AT4G23620
74 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.1071) with  --  NFD1
75 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.25455) with  --  emb2474; TIM9
76 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.809487) with  --  AT5G23540
77 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.817262) with  --  COX15
78 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.00462) with  --  PNM1
79 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.11498) with  --  GR-RBP3
80 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=0.818734) with  --  RPN5B
81 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has similar expression pattern (mutual information value=1.05747) with  --  AT5G19300
82 EMB2788  --  has similar expression pattern (mutual information value=0.85575) with  --  AT4G31810  --  has product (in catalytic reaction)  --  3-Hydroxy-2-methylpropanoate
83 EMB2788  --  has similar expression pattern (mutual information value=0.840935) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.811816) with  --  AT1G13160
84 EMB2788  --  has similar expression pattern (mutual information value=0.840935) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.886827) with  --  AT3G22660
85 EMB2788  --  has similar expression pattern (mutual information value=0.840935) with  --  NRPA1  --  has similar expression pattern (mutual information value=0.80261) with  --  AT5G22840
86 EMB2788  --  has similar expression pattern (mutual information value=0.840935) with  --  NRPA1  --  has product (in catalytic reaction)  --  RNA
87 EMB2788  --  has similar expression pattern (mutual information value=0.848157) with  --  LON1; LON_ARA_ARA  --  has similar expression pattern (mutual information value=0.867809) with  --  AT1G64600
88 EMB2788  --  has similar expression pattern (mutual information value=0.848157) with  --  LON1; LON_ARA_ARA  --  has similar expression pattern (mutual information value=0.826324) with  --  AT3G49320
89 EMB2788  --  has similar expression pattern (mutual information value=0.848157) with  --  LON1; LON_ARA_ARA  --  has similar expression pattern (mutual information value=0.999831) with  --  AT3G59820
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