Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G13590
Type: Protein GRN ID: np39068 Name:
Annotation: unknown protein; Has 150 Blast hits to 121 proteins in 42 species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Gene Locus: AT5G13590
Gene Expression (Affy ATH1 probeset): 250240_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G13590  --  interacts with  --  ATCSP3; CSP3
3 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATGRP7; CCR2; GR-RBP7; GRP7
4 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  spl4
5 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  APRR7; PRR7
6 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G14415
7 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATSOS4; SOS4
8 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  NIC2
9 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G09690
10 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  FLA16
11 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  SKIP
12 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ANNAT1; ATOXY5; OXY5
13 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ENO2; LOS2
14 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G05210
15 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT2G37220
16 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  PTAC16
17 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G59810
18 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  CRR31
19 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT1G28050
20 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  PRH75
21 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  JR1
22 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G42050
23 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  SVR3
24 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT4G32420
25 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G23390
26 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G65260
27 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATPABN1; PABN1
28 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G11200
29 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  DCP5
30 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G03920
31 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATAVP3; AtVHP1;1; AVP-3; AVP1
32 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G60980
33 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  CP29
34 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT4G10970
35 AT5G13590  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATNUC-L1; NUC-L1; PARL1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact