Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node JR1
Type: Protein GRN ID: np26347 Name: JR1
Annotation: JR1 | Mannose-binding lectin superfamily protein
Gene Locus: AT3G16470
Gene Expression (Affy ATH1 probeset): 259383_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 JR1  --  interacts with  --  ATCSP3; CSP3
3 JR1  --  has similar expression pattern (mutual information value=0.824514) with  --  AT4G23670
4 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATGRP7; CCR2; GR-RBP7; GRP7
5 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  spl4
6 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  APRR7; PRR7
7 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G14415
8 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATSOS4; SOS4
9 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  NIC2
10 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G09690
11 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  FLA16
12 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  SKIP
13 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ANNAT1; ATOXY5; OXY5
14 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ENO2; LOS2
15 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G05210
16 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G13590
17 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT2G37220
18 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  PTAC16
19 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G59810
20 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  CRR31
21 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT1G28050
22 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  PRH75
23 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G42050
24 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  SVR3
25 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT4G32420
26 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G23390
27 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G65260
28 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATPABN1; PABN1
29 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G11200
30 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  DCP5
31 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT3G03920
32 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATAVP3; AtVHP1;1; AVP-3; AVP1
33 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT5G60980
34 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  CP29
35 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  AT4G10970
36 JR1  --  interacts with  --  ATCSP3; CSP3  --  interacts with  --  ATNUC-L1; NUC-L1; PARL1
37 JR1  --  has similar expression pattern (mutual information value=0.824514) with  --  AT4G23670  --  has similar expression pattern (mutual information value=0.911085) with  --  MLP28
38 JR1  --  has similar expression pattern (mutual information value=0.824514) with  --  AT4G23670  --  has similar expression pattern (mutual information value=0.898229) with  --  MLP43
39 JR1  --  has similar expression pattern (mutual information value=0.824514) with  --  AT4G23670  --  has similar expression pattern (mutual information value=0.888726) with  --  KCS1
40 JR1  --  has similar expression pattern (mutual information value=0.824514) with  --  AT4G23670  --  has similar expression pattern (mutual information value=1.25981) with  --  AT3G26450
41 JR1  --  has similar expression pattern (mutual information value=0.824514) with  --  AT4G23670  --  interacts with  --  CPL3; ETC3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact