Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATCAF2; CAF2
Type: Protein GRN ID: np12390 Name: ATCAF2; CAF2
Annotation: CAF2, ATCAF2 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein
Gene Locus: AT1G23400
Gene Expression (Affy ATH1 probeset): 263014_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6
3 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis
4 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3
5 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.829342) with  --  ATPRFB; HCF109
6 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1
7 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.08843) with  --  ABC1; ATSIG1; ATSIG2; SIG1; SIG2; SIGA; SIGB
8 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.0558) with  --  emb2394
9 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.00166) with  --  AT1G73110
10 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.05888) with  --  LPA3
11 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.061) with  --  AT1G49975
12 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=0.897123) with  --  AT1G68520
13 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=0.816504) with  --  AT3G06980
14 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.1932) with  --  AT1G18170
15 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=0.967144) with  --  AT3G60370
16 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.12033) with  --  AT5G51110
17 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=1.00862) with  --  AT5G65220
18 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.860156) with  --  CRR6  --  has similar expression pattern (mutual information value=0.910025) with  --  pal3
19 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=0.822103) with  --  emb1513
20 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=0.936366) with  --  AT1G05140
21 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=0.984841) with  --  AT3G08920
22 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=1.1129) with  --  PIFI
23 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=0.945574) with  --  AT3G18500
24 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=1.01206) with  --  AT3G23700
25 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=1.0295) with  --  AT4G04330
26 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=1.02791) with  --  AT4G32340
27 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=1.0304) with  --  AT4G33500
28 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=1.06021) with  --  AT3G56650
29 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=0.852826) with  --  ATFRO6; FRO6; FRO6
30 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=0.852826) with  --  ATFRO7; FRO7
31 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=1.07895) with  --  crr1
32 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has similar expression pattern (mutual information value=0.983995) with  --  AT4G36530
33 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has product (in catalytic reaction)  --  antheraxanthin
34 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has product (in catalytic reaction)  --  Dehydroascorbate
35 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  has product (in catalytic reaction)  --  Zeaxanthin
36 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.01006) with  --  Carotenoid biosynthesis  --  interacts with  --  AT4G35760
37 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.836528) with  --  AT2G23390
38 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.941317) with  --  AT1G04420
39 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.04683) with  --  AT1G14030
40 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.0754) with  --  AT1G01970
41 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.808231) with  --  PDE326; PNP; RIF10
42 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.14877) with  --  ATAB2
43 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.06274) with  --  AT3G02450
44 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.16203) with  --  AT3G29185
45 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.00441) with  --  PAM68
46 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.02349) with  --  AT4G26370
47 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.93747) with  --  AT4G37510
48 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.975331) with  --  AT5G02710
49 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.958175) with  --  AtPLR1; PLR1
50 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.846102) with  --  CRR21
51 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=1.1017) with  --  APO2; emb1629
52 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=1.16641) with  --  PGR3  --  has similar expression pattern (mutual information value=0.926626) with  --  AT1G26230
53 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.829342) with  --  ATPRFB; HCF109  --  has similar expression pattern (mutual information value=0.800891) with  --  AT4G26555
54 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.829342) with  --  ATPRFB; HCF109  --  has similar expression pattern (mutual information value=0.826405) with  --  AT5G04440
55 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.16708) with  --  AT2G29180
56 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.03194) with  --  ABC4
57 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=0.846326) with  --  ATSIRB; SIRB
58 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.17326) with  --  AT3G15110
59 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.05245) with  --  AT3G22210
60 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.13277) with  --  FdC1
61 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.0793) with  --  DEG5; DEGP5; HHOA
62 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.13126) with  --  CHL I2; CHLI-2; CHLI2
63 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=0.978936) with  --  LPA2
64 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.0468) with  --  AT5G52190
65 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.07544) with  --  AT5G52960
66 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.04795) with  --  ARRPS1; RPS1
67 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.18648) with  --  AT5G14910
68 ATCAF2; CAF2  --  has similar expression pattern (mutual information value=0.962877) with  --  SECE1  --  has similar expression pattern (mutual information value=1.13844) with  --  FdC2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact