Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PFC1
Type: Protein GRN ID: np13225 Name: PFC1
Annotation: PFC1 | Ribosomal RNA adenine dimethylase family protein
Gene Locus: AT1G01860
Gene Expression (Affy ATH1 probeset): 261652_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430
3 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230
4 PFC1  --  has similar expression pattern (mutual information value=0.86937) with  --  AT3G13740
5 PFC1  --  has similar expression pattern (mutual information value=0.816206) with  --  PDE327
6 PFC1  --  has similar expression pattern (mutual information value=0.801267) with  --  AT4G33480
7 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960
8 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT1G06790
9 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT1G32580
10 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT3G15000
11 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT1G72530
12 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT2G35240
13 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT5G44780
14 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT3G06790
15 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  DAL; DAL1
16 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  AT4G20020
17 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  LSU1
18 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  HEMG1; PPO1; PPOX
19 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  MEF21
20 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  MEF9
21 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  interacts with  --  MEF1
22 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.18) with  --  AT2G30695
23 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.14023) with  --  AT2G32650
24 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.14023) with  --  PTAC18
25 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.945905) with  --  AT1G70200
26 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.00151) with  --  AT1G02150
27 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.1025) with  --  AT1G10522
28 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.16228) with  --  AT1G01970
29 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.822695) with  --  ICE2; SCRM2
30 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.843549) with  --  AtSWEET1; SWEET1
31 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.857685) with  --  AT1G78180
32 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.0363) with  --  AT3G09250
33 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.983922) with  --  PGR7
34 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.02132) with  --  AT3G25805
35 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.813774) with  --  MEE35; TCP4
36 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.996476) with  --  BSM
37 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.02456) with  --  AT4G13220
38 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.40302) with  --  AT4G24750
39 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.42021) with  --  AT4G26370
40 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.87295) with  --  AT4G26670
41 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.10721) with  --  EMB1923
42 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=0.816363) with  --  AFT; AKR2; AKR2A
43 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.03544) with  --  AT5G11450
44 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.05587) with  --  AT5G28750
45 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.06269) with  --  SVR7
46 PFC1  --  has similar expression pattern (mutual information value=0.860235) with  --  AT1G11430  --  has similar expression pattern (mutual information value=1.0841) with  --  AT2G33180
47 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.23328) with  --  CJD1
48 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.24587) with  --  CLPP6; NCLPP1; NCLPP6
49 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.09685) with  --  AT1G14030
50 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=0.881772) with  --  PDE318
51 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.33442) with  --  AT1G01080
52 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=0.862715) with  --  EMB3123
53 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.20329) with  --  AT3G19810
54 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.10015) with  --  AT3G18680
55 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.15453) with  --  pde191
56 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.13334) with  --  AtcpRRF; cpRRF; HFP108; RRF
57 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=0.868888) with  --  AT5G06130
58 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=1.15165) with  --  ATDEF2; DEF2; PDF1B
59 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=0.860233) with  --  ATFH5; Fh5
60 PFC1  --  has similar expression pattern (mutual information value=0.946423) with  --  AT3G20230  --  has similar expression pattern (mutual information value=0.836208) with  --  AT1G45230
61 PFC1  --  has similar expression pattern (mutual information value=0.86937) with  --  AT3G13740  --  has similar expression pattern (mutual information value=0.81092) with  --  AT3G02450
62 PFC1  --  has similar expression pattern (mutual information value=0.86937) with  --  AT3G13740  --  has similar expression pattern (mutual information value=0.922604) with  --  AT4G38225
63 PFC1  --  has similar expression pattern (mutual information value=0.86937) with  --  AT3G13740  --  interacts with  --  RGA1
64 PFC1  --  has similar expression pattern (mutual information value=0.816206) with  --  PDE327  --  has similar expression pattern (mutual information value=0.868851) with  --  AT3G06980
65 PFC1  --  has similar expression pattern (mutual information value=0.816206) with  --  PDE327  --  has similar expression pattern (mutual information value=0.820946) with  --  ATS2; EMB1995; LPAT1
66 PFC1  --  has similar expression pattern (mutual information value=0.816206) with  --  PDE327  --  has similar expression pattern (mutual information value=0.909559) with  --  ATRAB1A; ATRABD2B; RAB1A
67 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=0.85888) with  --  AT1G07440
68 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=1.05192) with  --  ATAB2
69 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=1.06028) with  --  AT4G03150
70 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=0.883118) with  --  AT4G13200
71 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=1.07045) with  --  AT3G60370
72 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=1.13385) with  --  HCF106
73 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=1.07544) with  --  SECE1
74 PFC1  --  has similar expression pattern (mutual information value=0.867184) with  --  AT5G52960  --  has similar expression pattern (mutual information value=1.09361) with  --  AT4G15510
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact