Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G59040
Type: Protein GRN ID: np26758 Name:
Annotation: Tetratricopeptide repeat (TPR)-like superfamily protein
Gene Locus: AT3G59040
Gene Expression (Affy ATH1 probeset): 251496_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650
3 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  PTAC18
4 AT3G59040  --  has similar expression pattern (mutual information value=0.99037) with  --  AT1G70200
5 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970
6 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10
7 AT3G59040  --  has similar expression pattern (mutual information value=0.832474) with  --  FLU
8 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930
9 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370
10 AT3G59040  --  has similar expression pattern (mutual information value=0.879363) with  --  AT4G30825
11 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390
12 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  interacts with  --  AT5G19960
13 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  interacts with  --  AT3G11590
14 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  interacts with  --  ATMAP70-1; MAP70-1
15 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  interacts with  --  AT1G05410
16 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  interacts with  --  ATMAP70-2; MAP70-2
17 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.860021) with  --  ATGRX2; CXIP2
18 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.923083) with  --  SKL2
19 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.17412) with  --  ATRAP; RAP
20 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.14023) with  --  AT1G11430
21 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.823989) with  --  ATHY2; GUN3; HY2
22 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.935596) with  --  PTAC13
23 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.00292) with  --  AT3G08740
24 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.861466) with  --  AT3G06950
25 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.01281) with  --  TRX P; TRX z
26 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.904314) with  --  PLSP1
27 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.830355) with  --  AT3G25470
28 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.05876) with  --  AT4G24750
29 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.881025) with  --  ATPPR5; EMB2453
30 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.13661) with  --  FSD3
31 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.881748) with  --  AT5G48730
32 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=0.984507) with  --  AT5G28750
33 AT3G59040  --  has similar expression pattern (mutual information value=1.00088) with  --  AT2G32650  --  has similar expression pattern (mutual information value=1.07683) with  --  SVR7
34 AT3G59040  --  has similar expression pattern (mutual information value=0.99037) with  --  AT1G70200  --  has similar expression pattern (mutual information value=1.01315) with  --  CPN60B; LEN1
35 AT3G59040  --  has similar expression pattern (mutual information value=0.99037) with  --  AT1G70200  --  has similar expression pattern (mutual information value=0.813393) with  --  ATWRKY6; WRKY6
36 AT3G59040  --  has similar expression pattern (mutual information value=0.99037) with  --  AT1G70200  --  has similar expression pattern (mutual information value=0.910681) with  --  EMB1865
37 AT3G59040  --  has similar expression pattern (mutual information value=0.99037) with  --  AT1G70200  --  has similar expression pattern (mutual information value=0.972058) with  --  BSM
38 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.07208) with  --  ATSIG6; SIG6; SIGF; SOLDAT8
39 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.933311) with  --  AT1G78180
40 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.1101) with  --  AT3G04550
41 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.979349) with  --  ATAB2
42 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.13064) with  --  AT3G02450
43 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.990288) with  --  PGR7
44 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.08068) with  --  AT3G25805
45 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=0.802285) with  --  PDE327
46 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.0754) with  --  PGR3
47 AT3G59040  --  has similar expression pattern (mutual information value=0.871862) with  --  AT1G01970  --  has similar expression pattern (mutual information value=1.13246) with  --  APO2; emb1629
48 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.893795) with  --  DEGP2; EMB3117
49 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.808867) with  --  ATSRS; OVA7; SRS
50 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.885139) with  --  AT1G02150
51 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.831262) with  --  AT2G17033
52 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.876996) with  --  PDE343; PTAC2
53 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.95523) with  --  PTAC14
54 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.952032) with  --  emb2726
55 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.928003) with  --  AT5G35210
56 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has similar expression pattern (mutual information value=0.928003) with  --  EGY1
57 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has product (in catalytic reaction)  --  NDP
58 AT3G59040  --  has similar expression pattern (mutual information value=0.917163) with  --  PDE326; PNP; RIF10  --  has product (in catalytic reaction)  --  RNA
59 AT3G59040  --  has similar expression pattern (mutual information value=0.832474) with  --  FLU  --  interacts with  --  AtHEMA1; HEMA1
60 AT3G59040  --  has similar expression pattern (mutual information value=0.832474) with  --  FLU  --  has similar expression pattern (mutual information value=0.841806) with  --  ATRBP31; ATRBP33; CP31; RBP31
61 AT3G59040  --  has similar expression pattern (mutual information value=0.832474) with  --  FLU  --  has similar expression pattern (mutual information value=0.990232) with  --  pde191
62 AT3G59040  --  has similar expression pattern (mutual information value=0.832474) with  --  FLU  --  is the target gene of  --  ath-miR396b
63 AT3G59040  --  has similar expression pattern (mutual information value=0.832474) with  --  FLU  --  is the target gene of  --  ath-miR396a
64 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=0.87987) with  --  LPA3
65 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=0.891884) with  --  AT1G50450
66 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=1.09495) with  --  AT3G07670
67 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=0.842147) with  --  AT3G10350
68 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=0.962844) with  --  AT3G43540
69 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=1.02422) with  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
70 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=0.981192) with  --  APG3
71 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=1.08318) with  --  AT5G02710
72 AT3G59040  --  has similar expression pattern (mutual information value=0.996008) with  --  AT3G20930  --  has similar expression pattern (mutual information value=0.955559) with  --  CP31B
73 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.04123) with  --  AT1G10522
74 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.31462) with  --  AT1G14030
75 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=0.911342) with  --  PDE318
76 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.05775) with  --  AT1G14270
77 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=0.828864) with  --  ICE2; SCRM2
78 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.09366) with  --  MAP1B; MAP1C
79 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.27301) with  --  AT3G19810
80 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.1263) with  --  AT3G29185
81 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.31409) with  --  AT3G18680
82 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.17147) with  --  AT3G20230
83 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.11804) with  --  PAM68
84 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=0.923131) with  --  AT4G24090
85 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=0.858604) with  --  AT4G26670
86 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.02329) with  --  AT4G37510
87 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.08983) with  --  AT4G39040
88 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.02623) with  --  AT5G11450
89 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.09409) with  --  ATDEF2; DEF2; PDF1B
90 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.0315) with  --  AT5G38290
91 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=0.981732) with  --  DEG8; DEGP8
92 AT3G59040  --  has similar expression pattern (mutual information value=0.947179) with  --  AT4G26370  --  has similar expression pattern (mutual information value=1.08576) with  --  AT5G66470
93 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.08932) with  --  SCY1
94 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.27414) with  --  CJD1
95 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.14791) with  --  CLPP6; NCLPP1; NCLPP6
96 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.15067) with  --  AT1G12800
97 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390  --  has similar expression pattern (mutual information value=0.903984) with  --  AT1G01320
98 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390  --  has similar expression pattern (mutual information value=0.956515) with  --  AT3G06980
99 AT3G59040  --  has similar expression pattern (mutual information value=1.02544) with  --  AT4G36390  --  has similar expression pattern (mutual information value=1.02918) with  --  CP29
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact