Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G04900
Type: Protein GRN ID: np12869 Name:
Annotation: Protein of unknown function (DUF185)
Gene Locus: AT1G04900
Gene Expression (Affy ATH1 probeset): 261124_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650
3 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=1.0236) with  --  AT2G18330
4 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.959608) with  --  MEE67
5 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.959608) with  --  AT1G18320
6 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=1.04475) with  --  AT1G53645
7 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.857657) with  --  AT1G73940
8 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=1.10352) with  --  PPR596
9 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.838725) with  --  AT1G73180
10 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.820091) with  --  ATPURC; PUR7; PURC
11 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.90225) with  --  ATPRMT3; PRMT3
12 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.945294) with  --  AT4G05400
13 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.810805) with  --  AT4G11120
14 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.99979) with  --  AT3G55605
15 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.895224) with  --  PNM1
16 AT1G04900  --  has similar expression pattern (mutual information value=0.812718) with  --  AT3G02650  --  has similar expression pattern (mutual information value=0.92797) with  --  AT5G27395
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact