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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G65490
Type: Protein GRN ID: np42068 Name:
Annotation: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SGT1 (InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G65490
Gene Expression (Affy ATH1 probeset): 247187_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G65490  --  has similar expression pattern (mutual information value=0.802211) with  --  AT1G76170
3 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170
4 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77150
5 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354
6 AT5G65490  --  has similar expression pattern (mutual information value=0.904779) with  --  ATPRP40C; PRP40C
7 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970
8 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130
9 AT5G65490  --  has similar expression pattern (mutual information value=0.876522) with  --  AT5G15570
10 AT5G65490  --  has similar expression pattern (mutual information value=0.802211) with  --  AT1G76170  --  has similar expression pattern (mutual information value=0.813425) with  --  AT1G79950
11 AT5G65490  --  has similar expression pattern (mutual information value=0.802211) with  --  AT1G76170  --  has similar expression pattern (mutual information value=0.848542) with  --  AT3G21810
12 AT5G65490  --  has similar expression pattern (mutual information value=0.802211) with  --  AT1G76170  --  has similar expression pattern (mutual information value=0.833495) with  --  AT3G48120
13 AT5G65490  --  has similar expression pattern (mutual information value=0.802211) with  --  AT1G76170  --  has similar expression pattern (mutual information value=0.824221) with  --  FAR1
14 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.8033) with  --  AT1G09190
15 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.885323) with  --  AT1G09320
16 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G54440
17 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.939664) with  --  AT1G07590
18 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.817931) with  --  AtMYB4R1; MYB4R1
19 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.809416) with  --  AT3G19650
20 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.806053) with  --  AT5G06780
21 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.816901) with  --  AT5G08535
22 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.895602) with  --  AT5G11310
23 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.836212) with  --  AT5G47090
24 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.80498) with  --  MEF1
25 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.800406) with  --  AT5G63690
26 AT5G65490  --  has similar expression pattern (mutual information value=0.825298) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.859347) with  --  AT5G66500
27 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.08308) with  --  AT2G47790
28 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.933415) with  --  AT1G60900
29 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.933415) with  --  AT1G60830
30 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.820928) with  --  AT1G54380
31 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.805118) with  --  AT1G06530
32 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.90461) with  --  AT1G11240
33 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.815002) with  --  AT1G63980
34 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.02474) with  --  AT1G07615
35 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.892047) with  --  AT1G12830
36 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.845734) with  --  AT1G48950
37 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.824855) with  --  AT1G55930
38 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.869625) with  --  AT1G74250
39 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.977219) with  --  GTE01; GTE1; IMB1
40 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.10552) with  --  AT3G19630
41 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.920483) with  --  AT2G34040
42 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.873639) with  --  VIL1; VRN5
43 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.22918) with  --  AT4G22350
44 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.22918) with  --  AT4G22285
45 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.807758) with  --  AT4G22720
46 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.918741) with  --  AT4G39160
47 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.02645) with  --  AT3G51270
48 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.80431) with  --  AT5G06110
49 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.0447) with  --  ABO1; AtELP1; ELO2
50 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.0932) with  --  AT5G14440
51 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.933277) with  --  AT5G18950
52 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.935876) with  --  AT5G49000
53 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.17357) with  --  AT5G57120
54 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.843431) with  --  AT5G25800
55 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.879835) with  --  AT5G27010
56 AT5G65490  --  has similar expression pattern (mutual information value=0.863157) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.879835) with  --  AT5G06350
57 AT5G65490  --  has similar expression pattern (mutual information value=0.904779) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.922764) with  --  ATIPT2
58 AT5G65490  --  has similar expression pattern (mutual information value=0.904779) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.946056) with  --  CHR11
59 AT5G65490  --  has similar expression pattern (mutual information value=0.904779) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.831815) with  --  SDN2
60 AT5G65490  --  has similar expression pattern (mutual information value=0.904779) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.937678) with  --  AT4G17620
61 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.829242) with  --  AT2G44200
62 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.841972) with  --  AT2G40780
63 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.884518) with  --  VHA-A
64 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.877634) with  --  AT3G18380
65 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.948661) with  --  AT3G13410
66 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.907072) with  --  ATSYP42; ATTLG2B; SYP42; TLG2B
67 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.885704) with  --  AT4G08580
68 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.885704) with  --  AT5G17900
69 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.909018) with  --  AT3G61800
70 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.846972) with  --  AT3G62220
71 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.837997) with  --  AT1G01350
72 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.837997) with  --  AT5G06420
73 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.822769) with  --  AT5G14710
74 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.830365) with  --  AT5G44150
75 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.888539) with  --  AT5G25520
76 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.836243) with  --  AT5G27460
77 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.819042) with  --  AT5G30490
78 AT5G65490  --  has similar expression pattern (mutual information value=0.812676) with  --  AT5G13970  --  has similar expression pattern (mutual information value=0.872116) with  --  AT5G09390
79 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.913337) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
80 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.968907) with  --  DRT111
81 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.981291) with  --  AT1G26660
82 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.870703) with  --  ftsh10
83 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.994627) with  --  AT1G02330
84 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.868703) with  --  AT4G27660
85 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.822501) with  --  AT3G50910
86 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.8852) with  --  NRPB6A; NRPD6A; NRPE6A
87 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.872468) with  --  AT5G62620
88 AT5G65490  --  has similar expression pattern (mutual information value=0.809944) with  --  AT5G51130  --  has similar expression pattern (mutual information value=0.875556) with  --  KIWI
89 AT5G65490  --  has similar expression pattern (mutual information value=0.876522) with  --  AT5G15570  --  has similar expression pattern (mutual information value=0.837254) with  --  AT1G03760
90 AT5G65490  --  has similar expression pattern (mutual information value=0.876522) with  --  AT5G15570  --  has similar expression pattern (mutual information value=0.812759) with  --  AGL18
91 AT5G65490  --  has similar expression pattern (mutual information value=0.876522) with  --  AT5G15570  --  has similar expression pattern (mutual information value=0.869998) with  --  AT3G63400
92 AT5G65490  --  has similar expression pattern (mutual information value=0.876522) with  --  AT5G15570  --  has similar expression pattern (mutual information value=0.818006) with  --  AtMAPR4; MAPR4
93 AT5G65490  --  has similar expression pattern (mutual information value=0.876522) with  --  AT5G15570  --  has similar expression pattern (mutual information value=0.967569) with  --  SMU2
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