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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G54440
Type: Protein GRN ID: np18266 Name:
Annotation: Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain
Gene Locus: AT1G54440
Gene Expression (Affy ATH1 probeset): 262996_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170
3 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77150
4 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240
5 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350
6 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22285
7 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.803616) with  --  AT1G76170
8 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.8033) with  --  AT1G09190
9 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.885323) with  --  AT1G09320
10 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.939664) with  --  AT1G07590
11 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.857418) with  --  CDC48C; emb1354
12 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.817931) with  --  AtMYB4R1; MYB4R1
13 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.809416) with  --  AT3G19650
14 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.856805) with  --  AT3G48120
15 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.806053) with  --  AT5G06780
16 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.816901) with  --  AT5G08535
17 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.895602) with  --  AT5G11310
18 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.895903) with  --  AT5G13970
19 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.836212) with  --  AT5G47090
20 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.826735) with  --  AT5G51130
21 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.80498) with  --  MEF1
22 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.800406) with  --  AT5G63690
23 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.825298) with  --  AT5G65490
24 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.859347) with  --  AT5G66500
25 AT1G54440  --  has similar expression pattern (mutual information value=0.845294) with  --  AT1G77170  --  has similar expression pattern (mutual information value=0.891472) with  --  FAR1
26 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  interacts with  --  AHL29; SOB3
27 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.985103) with  --  AT2G47790
28 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.851596) with  --  AT1G79200
29 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.846398) with  --  AT2G21290
30 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.976472) with  --  AT1G12830
31 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.942928) with  --  AT1G53460
32 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.825019) with  --  AT1G02330
33 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=1.03625) with  --  AT2G34040
34 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.99207) with  --  AT3G51270
35 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.905075) with  --  AT3G62840
36 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.960064) with  --  AT5G11760
37 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.849018) with  --  NACA3
38 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.960365) with  --  AT5G14440
39 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.996199) with  --  AT5G42060
40 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.930066) with  --  NRPB6A; NRPD6A; NRPE6A
41 AT1G54440  --  has similar expression pattern (mutual information value=0.834332) with  --  AT1G11240  --  has similar expression pattern (mutual information value=0.851656) with  --  AT5G64160
42 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.820312) with  --  AT2G33680
43 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.935166) with  --  AT2G25720
44 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.896632) with  --  ATTOM22-I; TOM22-I
45 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.971404) with  --  AT1G09660
46 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.895534) with  --  AT2G24990
47 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.895534) with  --  AT5G37350
48 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.99915) with  --  AT2G31725
49 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.825976) with  --  AT1G54380
50 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=1.09601) with  --  DRT111
51 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=1.06396) with  --  AT1G07615
52 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=1.06124) with  --  ftsh10
53 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.888913) with  --  NF-YC10
54 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.882883) with  --  AT1G71350
55 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.803419) with  --  AT1G56350
56 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.969336) with  --  AT3G02320
57 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.868129) with  --  AT3G03420
58 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.89978) with  --  UNE6
59 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.910891) with  --  AT3G07170
60 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.800827) with  --  AT3G23330
61 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.880314) with  --  ATPRP40C; PRP40C
62 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.8601) with  --  AT3G13845
63 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=1.03788) with  --  GTE01; GTE1; IMB1
64 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=1.02404) with  --  AT3G19630
65 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.883457) with  --  VIL1; VRN5
66 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.96868) with  --  AT3G12340
67 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.909661) with  --  AT1G20300
68 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.954778) with  --  AT4G01990
69 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.883541) with  --  AT4G07950
70 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.883541) with  --  AT1G01210
71 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.891526) with  --  ATMLH1; MLH1
72 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.874498) with  --  AT4G17960
73 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.805198) with  --  AT4G25210
74 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.856174) with  --  AT4G30820
75 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.983495) with  --  AT4G39160
76 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.922964) with  --  AT3G49890
77 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.879028) with  --  AT3G63400
78 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.913142) with  --  ATO
79 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.984594) with  --  AT5G49000
80 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.929963) with  --  AT5G50020
81 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=1.17411) with  --  AT5G53800
82 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=1.22827) with  --  AT5G57120
83 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.957584) with  --  AT5G61880
84 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.949037) with  --  AT5G27010
85 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.949037) with  --  AT5G06350
86 AT1G54440  --  has similar expression pattern (mutual information value=0.826379) with  --  AT4G22350  --  has similar expression pattern (mutual information value=0.864134) with  --  AT4G17010
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