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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G48950
Type: Protein GRN ID: np15354 Name:
Annotation: C3HC zinc finger-like
Gene Locus: AT1G48950
Gene Expression (Affy ATH1 probeset): 260764_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354
3 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630
4 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840
5 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.08308) with  --  AT2G47790
6 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.933415) with  --  AT1G60900
7 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.933415) with  --  AT1G60830
8 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.857418) with  --  AT1G77170
9 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.857418) with  --  AT1G77150
10 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.820928) with  --  AT1G54380
11 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.805118) with  --  AT1G06530
12 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.90461) with  --  AT1G11240
13 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.815002) with  --  AT1G63980
14 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.02474) with  --  AT1G07615
15 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.892047) with  --  AT1G12830
16 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.824855) with  --  AT1G55930
17 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.869625) with  --  AT1G74250
18 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.97069) with  --  ATPRP40C; PRP40C
19 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.977219) with  --  GTE01; GTE1; IMB1
20 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.909915) with  --  AT3G19650
21 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.920483) with  --  AT2G34040
22 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.873639) with  --  VIL1; VRN5
23 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.22918) with  --  AT4G22350
24 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.22918) with  --  AT4G22285
25 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.807758) with  --  AT4G22720
26 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.918741) with  --  AT4G39160
27 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.02645) with  --  AT3G51270
28 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.80431) with  --  AT5G06110
29 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.984472) with  --  AT5G11310
30 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.0447) with  --  ABO1; AtELP1; ELO2
31 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.0932) with  --  AT5G14440
32 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.933277) with  --  AT5G18950
33 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.935876) with  --  AT5G49000
34 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=1.17357) with  --  AT5G57120
35 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.863157) with  --  AT5G65490
36 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.843431) with  --  AT5G25800
37 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.879835) with  --  AT5G27010
38 AT1G48950  --  has similar expression pattern (mutual information value=0.845734) with  --  CDC48C; emb1354  --  has similar expression pattern (mutual information value=0.879835) with  --  AT5G06350
39 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.00986) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
40 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.824374) with  --  emb1220
41 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.824374) with  --  AT3G60610
42 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.849291) with  --  AT1G60200
43 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.882634) with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21
44 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.914769) with  --  GIF2
45 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.16627) with  --  AT1G05410
46 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.881897) with  --  AT3G02320
47 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.999539) with  --  LWD2
48 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.828909) with  --  GTA02; GTA2
49 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.828909) with  --  AT4G08360
50 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.08826) with  --  At-RS31; ATRSP31; RS31; RSP31
51 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.937414) with  --  AT3G63400
52 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.818568) with  --  AT5G06780
53 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.890232) with  --  AT5G13560
54 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.03015) with  --  ATGSTT2; GST10B; GSTT2
55 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.03015) with  --  ATGSTT3; GST10C; GSTT3
56 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.825706) with  --  AT5G49880
57 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.840215) with  --  At-RS41; ATRSP41; RS41
58 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.991438) with  --  AT5G53800
59 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.02855) with  --  AT5G15570
60 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.915077) with  --  AT4G16440
61 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=0.803114) with  --  AT4G17010
62 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.20397) with  --  FAR1
63 AT1G48950  --  has similar expression pattern (mutual information value=0.91679) with  --  AT3G19630  --  has similar expression pattern (mutual information value=1.0333) with  --  SMU2
64 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  interacts with  --  ATIMPALPHA3; IMPA-3; MOS6
65 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  interacts with  --  IMPA-2
66 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.804775) with  --  PSBW
67 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.824497) with  --  AT2G34620
68 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.805114) with  --  AT2G35330
69 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.875825) with  --  AT2G02160
70 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.927408) with  --  ATCDC5; ATMYBCDC5; CDC5
71 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.859993) with  --  GAPA-2
72 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.802388) with  --  AT1G72390
73 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.815847) with  --  AT1G52220
74 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.880412) with  --  AT3G07220
75 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.880412) with  --  AT3G07260
76 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.866015) with  --  AT3G12640
77 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.859521) with  --  AT1G56290
78 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.939722) with  --  AT4G31880
79 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.911262) with  --  AT3G47610
80 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.813595) with  --  ACSF; CHL27; CRD1
81 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.936373) with  --  CKB3
82 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.920709) with  --  EMB2789; MOS7
83 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.906548) with  --  AT5G07360
84 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.837793) with  --  WIT1
85 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.812018) with  --  APE2; TPT
86 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.84149) with  --  AT5G47090
87 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.899475) with  --  AT5G49400
88 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.814637) with  --  AT5G59250
89 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.886075) with  --  AT4G17620
90 AT1G48950  --  has similar expression pattern (mutual information value=0.904434) with  --  AT5G46840  --  has similar expression pattern (mutual information value=0.804254) with  --  AT4G16980
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