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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node SDN2
Type: Protein GRN ID: np40341 Name: SDN2
Annotation: SDN2 | small RNA degrading nuclease 2
Gene Locus: AT5G05540
Gene Expression (Affy ATH1 probeset): 250786_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6
3 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C
4 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1
5 SDN2  --  has similar expression pattern (mutual information value=0.839837) with  --  MGO1; TOP1; TOP1ALPHA
6 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=1.02216) with  --  AT1G60900
7 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=1.02216) with  --  AT1G60830
8 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.862743) with  --  AT2G24830
9 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.876875) with  --  DRT111
10 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.886724) with  --  GIF2
11 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.973441) with  --  HUB2
12 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.939485) with  --  AT1G17680
13 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=1.02979) with  --  CHR11
14 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.854174) with  --  AT1G76860
15 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.89978) with  --  AT4G22350
16 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.89978) with  --  AT4G22285
17 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=1.06962) with  --  AT4G27120
18 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.848075) with  --  AT4G30820
19 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=1.03608) with  --  AT3G48120
20 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.998252) with  --  ATGSTT2; GST10B; GSTT2
21 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.998252) with  --  ATGSTT3; GST10C; GSTT3
22 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.804445) with  --  TOP1; TOP1BETA
23 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.868377) with  --  CPL4
24 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=0.830439) with  --  AT4G17010
25 SDN2  --  has similar expression pattern (mutual information value=0.833564) with  --  UNE6  --  has similar expression pattern (mutual information value=1.13464) with  --  FAR1
26 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.865614) with  --  AT1G76170
27 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.922764) with  --  ATIPT2
28 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.998548) with  --  AT1G79950
29 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.97069) with  --  CDC48C; emb1354
30 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.912545) with  --  AT3G19630
31 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.875849) with  --  AT4G39160
32 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.904779) with  --  AT5G65490
33 SDN2  --  has similar expression pattern (mutual information value=0.831815) with  --  ATPRP40C; PRP40C  --  has similar expression pattern (mutual information value=0.937678) with  --  AT4G17620
34 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  has similar expression pattern (mutual information value=1.11411) with  --  AT2G47790
35 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  has similar expression pattern (mutual information value=0.878306) with  --  ATCSN2; COP12; CSN2; FUS12
36 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  has similar expression pattern (mutual information value=0.811798) with  --  AT1G60200
37 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  has similar expression pattern (mutual information value=1.04747) with  --  AT1G05410
38 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  has similar expression pattern (mutual information value=0.832042) with  --  AT5G49400
39 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  has similar expression pattern (mutual information value=0.927379) with  --  AT5G61880
40 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  has similar expression pattern (mutual information value=1.04672) with  --  AT5G20600
41 SDN2  --  has similar expression pattern (mutual information value=0.839321) with  --  GTE01; GTE1; IMB1  --  is the target gene of  --  ath-miR865-3p
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