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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G09280
Type: Protein GRN ID: np11016 Name:
Annotation: CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink).
Gene Locus: AT1G09280
Gene Expression (Affy ATH1 probeset): 264265_at    
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 Protein modification
 Protein-protein interaction
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 Small RNA-target regulation
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 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G09280  --  is the target gene of  --  ath-miR3440b-3p
3 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34
4 AT1G09280  --  is the target gene of  --  ath-miR3440b-3p  --  inhibit the expression of  --  AT3G44940
5 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  ATCBL2; CBL2
6 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  AT5G62600
7 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  AT2G43370
8 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  AT3G63400
9 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  AT4G32420
10 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  At-SCL30A; SCL30A
11 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  At-SCL30; SCL30
12 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  At-SCL28; SCL28
13 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33
14 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21
15 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  interacts with  --  ATCYP59; CYP59
16 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  has similar expression pattern (mutual information value=0.830535) with  --  ACBP2
17 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  has similar expression pattern (mutual information value=0.809528) with  --  AT4G29380
18 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  has similar expression pattern (mutual information value=0.937819) with  --  AT5G66180
19 AT1G09280  --  has similar expression pattern (mutual information value=0.858514) with  --  At-SR34; ATSRP34; SR1; SR34; SRP34  --  is the target gene of  --  ath-miR864-5p
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