Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G13150
Type: Protein GRN ID: np33681 Name:
Annotation: unknown protein; Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Gene Locus: AT4G13150
Gene Expression (Affy ATH1 probeset): 254750_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G13150  --  has similar expression pattern (mutual information value=0.855286) with  --  ATCSLD3; CSLD3; KJK; RHD7
3 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500
4 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975
5 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510
6 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530
7 AT4G13150  --  has similar expression pattern (mutual information value=0.855286) with  --  ATCSLD3; CSLD3; KJK; RHD7  --  has similar expression pattern (mutual information value=0.832499) with  --  AT2G34300
8 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.969395) with  --  AT2G30170
9 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.945574) with  --  Carotenoid biosynthesis
10 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=1.01013) with  --  AT1G05140
11 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.878399) with  --  AT1G06690
12 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.964883) with  --  AT1G71810
13 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.958068) with  --  AT1G52870
14 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.944474) with  --  AT1G28140
15 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.963353) with  --  AT3G02690
16 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=1.00668) with  --  AT4G27390
17 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=1.07668) with  --  AT4G33500
18 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=1.23725) with  --  AT3G61080
19 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.902247) with  --  SQE5; SQP1
20 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.806912) with  --  AT5G53320
21 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.954798) with  --  AtPLR1; PLR1
22 AT4G13150  --  has similar expression pattern (mutual information value=0.933992) with  --  AT3G18500  --  has similar expression pattern (mutual information value=0.903658) with  --  AT5G59130
23 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.88864) with  --  AT3G03890
24 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.876921) with  --  GPK1
25 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.991593) with  --  AT4G38020
26 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.852962) with  --  GAD; GAD1
27 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.859281) with  --  AT5G41960
28 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.815289) with  --  FPS1
29 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.913525) with  --  AT5G53940
30 AT4G13150  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.878709) with  --  AT5G27730
31 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.01007) with  --  ATFC-II; FC-II; FC2
32 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.859686) with  --  AT2G03310
33 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.01676) with  --  ABCD2
34 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.0494) with  --  AT1G79510
35 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.945326) with  --  AT1G68660
36 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.08512) with  --  AT1G76730
37 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.11916) with  --  AT3G22210
38 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.17116) with  --  AT4G12830
39 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.924164) with  --  BGLU9
40 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.19601) with  --  AT4G29590
41 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.898245) with  --  ALDH3; ALDH3I1
42 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.934247) with  --  AT5G05200
43 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.949923) with  --  AT5G44520
44 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.810671) with  --  AT5G46390
45 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.803867) with  --  AT5G48590
46 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.892926) with  --  ATFRO6; FRO6; FRO6
47 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=0.892926) with  --  ATFRO7; FRO7
48 AT4G13150  --  has similar expression pattern (mutual information value=0.906794) with  --  AT5G38510  --  has similar expression pattern (mutual information value=1.0986) with  --  AT5G27560
49 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  interacts with  --  AT4G00355
50 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.957044) with  --  AT1G77090
51 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.959517) with  --  AT2G36145
52 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.974) with  --  AT2G05310
53 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.974) with  --  AT4G13500
54 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.02351) with  --  LPA1
55 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.952452) with  --  AT1G14270
56 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.910338) with  --  AT3G25805
57 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.03162) with  --  PGR5-LIKE A
58 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.07141) with  --  AT4G28025
59 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.04603) with  --  AT4G28740
60 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.810726) with  --  DHS2
61 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=0.980649) with  --  AT3G46630
62 AT4G13150  --  has similar expression pattern (mutual information value=0.842093) with  --  AT4G36530  --  has similar expression pattern (mutual information value=1.01276) with  --  CcdA
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact