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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G53920
Type: Protein GRN ID: np37110 Name:
Annotation: ribosomal protein L11 methyltransferase-related
Gene Locus: AT5G53920
Gene Expression (Affy ATH1 probeset): 248239_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080
3 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.22452) with  --  AT2G38090
4 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.827878) with  --  AT2G41040
5 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.979777) with  --  GATA2
6 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.851764) with  --  AT1G23060
7 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.92229) with  --  AtHB23; HB23
8 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.879937) with  --  ATFUT6; FUT6
9 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.941504) with  --  AT1G74840
10 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.924811) with  --  AtENODL8; ENODL8
11 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.810415) with  --  AT1G19650
12 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.1034) with  --  BGAL5
13 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.917215) with  --  AT1G29160
14 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.864815) with  --  ACT8; FIZ1
15 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.815857) with  --  AT1G18910
16 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.857138) with  --  RCI2B
17 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.919435) with  --  AT3G04320
18 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.919435) with  --  AT3G04330
19 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.04762) with  --  RNR2; RNR2A
20 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.915209) with  --  ACT2; DER1; ENL2; FIZ2; LSR2
21 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.819618) with  --  AT3G12710
22 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.880365) with  --  TET6
23 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.902634) with  --  AT3G59370
24 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.894738) with  --  AT5G05790
25 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.912992) with  --  AtLOG7
26 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.801184) with  --  GASA4
27 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.981677) with  --  AT5G24580
28 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.952009) with  --  AT5G41960
29 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.12915) with  --  LNG1
30 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.854594) with  --  AT5G16990
31 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.02665) with  --  AT1G77330
32 AT5G53920  --  has similar expression pattern (mutual information value=0.805355) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.22066) with  --  AT5G19340
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