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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G04960
Type: Protein GRN ID: np38518 Name:
Annotation: Plant invertase/pectin methylesterase inhibitor superfamily
Gene Locus: AT5G04960
Gene Expression (Affy ATH1 probeset): 250801_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G04960  --  has similar expression pattern (mutual information value=0.870679) with  --  MRH6
3 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960
4 AT5G04960  --  has similar expression pattern (mutual information value=0.986854) with  --  AT1G34510
5 AT5G04960  --  has similar expression pattern (mutual information value=1.32309) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18
6 AT5G04960  --  has similar expression pattern (mutual information value=1.10733) with  --  AtGH9C1; GH9C1
7 AT5G04960  --  has similar expression pattern (mutual information value=1.02911) with  --  RHS12
8 AT5G04960  --  has similar expression pattern (mutual information value=0.852252) with  --  AT4G09990
9 AT5G04960  --  has similar expression pattern (mutual information value=0.936112) with  --  AT4G22090
10 AT5G04960  --  has similar expression pattern (mutual information value=0.936112) with  --  RHS14
11 AT5G04960  --  has similar expression pattern (mutual information value=1.22133) with  --  AT4G26010
12 AT5G04960  --  has similar expression pattern (mutual information value=0.905639) with  --  AT4G30320
13 AT5G04960  --  has similar expression pattern (mutual information value=1.22775) with  --  AT3G49960
14 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580
15 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  ATHRGP1; HRGP1
16 AT5G04960  --  has similar expression pattern (mutual information value=0.951017) with  --  AT5G24313
17 AT5G04960  --  has similar expression pattern (mutual information value=0.843476) with  --  COBL9; DER9; MRH4; SHV2
18 AT5G04960  --  has similar expression pattern (mutual information value=0.831356) with  --  LRL3
19 AT5G04960  --  has similar expression pattern (mutual information value=1.06308) with  --  AtXTH12; XTH12
20 AT5G04960  --  has similar expression pattern (mutual information value=1.36524) with  --  RHS19
21 AT5G04960  --  has similar expression pattern (mutual information value=1.08315) with  --  AT5G35190
22 AT5G04960  --  has similar expression pattern (mutual information value=0.870679) with  --  MRH6  --  has similar expression pattern (mutual information value=0.852475) with  --  AT2G41970
23 AT5G04960  --  has similar expression pattern (mutual information value=0.870679) with  --  MRH6  --  has similar expression pattern (mutual information value=0.870983) with  --  ADF11
24 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  interacts with  --  AT1G54840
25 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.807873) with  --  AT1G30870
26 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=1.05974) with  --  ATST4B; ST4B
27 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.802155) with  --  AHP1
28 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.848887) with  --  AT1G66800
29 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.837772) with  --  RHS13
30 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.842605) with  --  AT3G45080
31 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.842605) with  --  AT3G45070
32 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.832333) with  --  AT3G50300
33 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.802855) with  --  AT5G23830
34 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.841554) with  --  CYP71A16
35 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.831629) with  --  AT5G42510
36 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.831629) with  --  AT5G42500
37 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.946029) with  --  AtTHAS1; THAS; THAS1
38 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.993184) with  --  CYP705A5; THAD; THAD1
39 AT5G04960  --  has similar expression pattern (mutual information value=0.881007) with  --  AT1G14960  --  has similar expression pattern (mutual information value=0.820163) with  --  AT5G47980
40 AT5G04960  --  has similar expression pattern (mutual information value=0.986854) with  --  AT1G34510  --  has similar expression pattern (mutual information value=0.81826) with  --  ATIRT2; IRT2
41 AT5G04960  --  has similar expression pattern (mutual information value=0.986854) with  --  AT1G34510  --  has similar expression pattern (mutual information value=0.942546) with  --  ATXTH14; XTH14; XTR9
42 AT5G04960  --  has similar expression pattern (mutual information value=1.32309) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=1.06371) with  --  ATEXP7; ATEXPA7; ATHEXP ALPHA 1.26; EXP7; EXPA7
43 AT5G04960  --  has similar expression pattern (mutual information value=1.32309) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18  --  has similar expression pattern (mutual information value=1.00618) with  --  AT3G12540
44 AT5G04960  --  has similar expression pattern (mutual information value=1.10733) with  --  AtGH9C1; GH9C1  --  has similar expression pattern (mutual information value=0.859926) with  --  ATMLO15; MLO15
45 AT5G04960  --  has similar expression pattern (mutual information value=1.10733) with  --  AtGH9C1; GH9C1  --  has similar expression pattern (mutual information value=0.894165) with  --  ATPRP1; PRP1; RHS7
46 AT5G04960  --  has similar expression pattern (mutual information value=1.10733) with  --  AtGH9C1; GH9C1  --  has similar expression pattern (mutual information value=0.99959) with  --  ADF8
47 AT5G04960  --  has similar expression pattern (mutual information value=1.10733) with  --  AtGH9C1; GH9C1  --  has similar expression pattern (mutual information value=0.845765) with  --  AT4G26220
48 AT5G04960  --  has similar expression pattern (mutual information value=1.10733) with  --  AtGH9C1; GH9C1  --  has similar expression pattern (mutual information value=0.895245) with  --  RAP2.11
49 AT5G04960  --  has similar expression pattern (mutual information value=1.10733) with  --  AtGH9C1; GH9C1  --  has similar expression pattern (mutual information value=0.891719) with  --  AT2G47540
50 AT5G04960  --  has similar expression pattern (mutual information value=1.02911) with  --  RHS12  --  has similar expression pattern (mutual information value=0.8355) with  --  AT2G45750
51 AT5G04960  --  has similar expression pattern (mutual information value=1.02911) with  --  RHS12  --  has similar expression pattern (mutual information value=0.98354) with  --  COW1; SRH1
52 AT5G04960  --  has similar expression pattern (mutual information value=1.02911) with  --  RHS12  --  has similar expression pattern (mutual information value=0.97628) with  --  AHA7; HA7
53 AT5G04960  --  has similar expression pattern (mutual information value=0.852252) with  --  AT4G09990  --  has similar expression pattern (mutual information value=0.850745) with  --  TIP4;1
54 AT5G04960  --  has similar expression pattern (mutual information value=0.852252) with  --  AT4G09990  --  has similar expression pattern (mutual information value=0.946376) with  --  AT5G05500
55 AT5G04960  --  has similar expression pattern (mutual information value=1.22133) with  --  AT4G26010  --  has similar expression pattern (mutual information value=0.888184) with  --  AT1G18980
56 AT5G04960  --  has similar expression pattern (mutual information value=1.22133) with  --  AT4G26010  --  has similar expression pattern (mutual information value=0.805781) with  --  AT4G22212
57 AT5G04960  --  has similar expression pattern (mutual information value=1.22133) with  --  AT4G26010  --  has similar expression pattern (mutual information value=0.823005) with  --  AT4G25090
58 AT5G04960  --  has similar expression pattern (mutual information value=1.22133) with  --  AT4G26010  --  has similar expression pattern (mutual information value=1.17682) with  --  ATPRP3; PRP3
59 AT5G04960  --  has similar expression pattern (mutual information value=1.22133) with  --  AT4G26010  --  has similar expression pattern (mutual information value=0.939585) with  --  AT5G17820
60 AT5G04960  --  has similar expression pattern (mutual information value=1.22775) with  --  AT3G49960  --  has similar expression pattern (mutual information value=0.801063) with  --  ATXTH26; XTH26
61 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.925024) with  --  AT2G43150
62 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.10475) with  --  AT1G23720
63 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.964513) with  --  AT1G05240
64 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.964513) with  --  AT1G05250
65 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630
66 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT2G24980
67 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.07929) with  --  AT4G13390
68 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.849496) with  --  LRX1
69 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.845497) with  --  AT3G28550
70 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.811733) with  --  ATPAP7; PAP7
71 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.03089) with  --  ATEXT3; EXT3; RSH
72 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.878052) with  --  AT3G07900
73 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.818126) with  --  WIH3
74 AT5G04960  --  has similar expression pattern (mutual information value=1.02004) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2
75 AT5G04960  --  has similar expression pattern (mutual information value=0.843476) with  --  COBL9; DER9; MRH4; SHV2  --  has similar expression pattern (mutual information value=0.840132) with  --  AT4G25790
76 AT5G04960  --  has similar expression pattern (mutual information value=0.831356) with  --  LRL3  --  interacts with  --  ATSWI3B?
77 AT5G04960  --  has similar expression pattern (mutual information value=1.06308) with  --  AtXTH12; XTH12  --  has similar expression pattern (mutual information value=1.02981) with  --  RHS18
78 AT5G04960  --  has similar expression pattern (mutual information value=1.06308) with  --  AtXTH12; XTH12  --  has similar expression pattern (mutual information value=1.10694) with  --  AtXTH13; XTH13
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