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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G28550
Type: Protein GRN ID: np27445 Name:
Annotation: Proline-rich extensin-like family protein
Gene Locus: AT3G28550
Gene Expression (Affy ATH1 probeset): 257041_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970
3 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910
4 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15
5 AT3G28550  --  has similar expression pattern (mutual information value=0.854535) with  --  AT2G39040
6 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580
7 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT1G23720
8 AT3G28550  --  has similar expression pattern (mutual information value=0.811804) with  --  LRX2
9 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11
10 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970  --  interacts with  --  AT4G13000
11 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.852475) with  --  MRH6
12 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.926532) with  --  AtGH9C1; GH9C1
13 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.837287) with  --  ATEXP7; ATEXPA7; ATHEXP ALPHA 1.26; EXP7; EXPA7
14 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.859562) with  --  AT3G49960
15 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.835946) with  --  ATHRGP1; HRGP1
16 AT3G28550  --  has similar expression pattern (mutual information value=0.924543) with  --  AT2G41970  --  has similar expression pattern (mutual information value=0.93995) with  --  LRL3
17 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.948385) with  --  AT2G39110
18 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=1.16407) with  --  AT1G52060
19 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=1.07675) with  --  AT1G52050
20 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.940144) with  --  ATCNGC14; CNGC14
21 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.842307) with  --  ATPAP7; PAP7
22 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=1.00728) with  --  BGLU35; TGG5
23 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=1.00728) with  --  BGLU34; TGG4
24 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.971551) with  --  ATGSTU28; GSTU28
25 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.822479) with  --  AT3G06460
26 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.885941) with  --  CYP87A2
27 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.879181) with  --  WIH3
28 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=1.02737) with  --  AT5G14150
29 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=1.06818) with  --  AT5G54370
30 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=1.0775) with  --  AT5G62340
31 AT3G28550  --  has similar expression pattern (mutual information value=1.04548) with  --  AT2G34910  --  has similar expression pattern (mutual information value=0.861105) with  --  BCCP2; CAC1-B
32 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  interacts with  --  ATPEN3; PEN3
33 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  interacts with  --  AT3G18215
34 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  interacts with  --  ATSK42; SK42
35 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  interacts with  --  AMT1;2; ATAMT1;2
36 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.801358) with  --  LRX1
37 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.87029) with  --  RHS12
38 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.829004) with  --  AT3G07900
39 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.835475) with  --  ADF8
40 AT3G28550  --  has similar expression pattern (mutual information value=0.843798) with  --  ATMLO15; MLO15  --  has similar expression pattern (mutual information value=0.90875) with  --  RAP2.11
41 AT3G28550  --  has similar expression pattern (mutual information value=0.854535) with  --  AT2G39040  --  has similar expression pattern (mutual information value=0.846983) with  --  AT1G56680
42 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.925024) with  --  AT2G43150
43 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.952354) with  --  AT1G30870
44 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.964513) with  --  AT1G05240
45 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.964513) with  --  AT1G05250
46 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT5G06630
47 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.64716) with  --  AT2G24980
48 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.949689) with  --  ATEXP18; ATEXPA18; ATHEXP ALPHA 1.25; EXP18; EXPA18
49 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.988407) with  --  RHS13
50 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.07929) with  --  AT4G13390
51 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.989588) with  --  ATXTH14; XTH14; XTR9
52 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.05155) with  --  AT4G26010
53 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.03089) with  --  ATEXT3; EXT3; RSH
54 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.02004) with  --  AT5G04960
55 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.93301) with  --  COBL9; DER9; MRH4; SHV2
56 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=0.815026) with  --  ATRBOHC; RBOHC; RHD2
57 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.03754) with  --  RHS19
58 AT3G28550  --  has similar expression pattern (mutual information value=1.05947) with  --  AT3G54580  --  has similar expression pattern (mutual information value=1.18215) with  --  AT5G35190
59 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.803425) with  --  scpl28
60 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=1.17919) with  --  AT1G52070
61 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=1.10994) with  --  RGF3
62 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.956959) with  --  AT1G33800
63 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=1.07819) with  --  BGLU21
64 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=1.07819) with  --  BGLU22
65 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.902814) with  --  ATPPC3; PPC3
66 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.804855) with  --  CYP705A20
67 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.836165) with  --  RALFL27
68 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=1.02931) with  --  PLA IVD; PLP8
69 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.971908) with  --  AT4G31320
70 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=1.24361) with  --  AT5G40510
71 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.995442) with  --  GMD1
72 AT3G28550  --  has similar expression pattern (mutual information value=1.01067) with  --  ADF11  --  has similar expression pattern (mutual information value=0.890568) with  --  AT5G26280
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